RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 PCK2Q16822 640 aa13.2□□□□□ -0.3
TUBB3-213ENST00000557262 TEX30Q5JUR7 227 aa13.2□□□□□ -0.3
TUBB3-213ENST00000557262 ZNF770Q6IQ21 691 aaPredicted RBP13.2□□□□□ -0.3
TUBB3-213ENST00000557262 LYPD4Q6UWN0 246 aa13.2□□□□□ -0.3
TUBB3-213ENST00000557262 LNX2Q8N448 690 aa13.2□□□□□ -0.3
TUBB3-213ENST00000557262 ZNF511Q8NB15 262 aa13.2□□□□□ -0.3
TUBB3-213ENST00000557262 OR8D4Q8NGM9 314 aa13.2□□□□□ -0.3
TUBB3-213ENST00000557262 OR9Q1Q8NGQ5 310 aa13.2□□□□□ -0.3
TUBB3-213ENST00000557262 TMIGD2Q96BF3 282 aa13.2□□□□□ -0.3
TUBB3-213ENST00000557262 SLAMF6Q96DU3 332 aa13.2□□□□□ -0.3
TUBB3-213ENST00000557262 TECTBQ96PL2 329 aa13.2□□□□□ -0.3
TUBB3-213ENST00000557262 COPS4Q9BT78 406 aa13.2□□□□□ -0.3
TUBB3-213ENST00000557262 TSSK6Q9BXA6 273 aa13.2□□□□□ -0.3
TUBB3-213ENST00000557262 SLITRK2Q9H156 845 aa13.2□□□□□ -0.3
TUBB3-213ENST00000557262 MMADHCQ9H3L0 296 aaPredicted RBP13.2□□□□□ -0.3
TUBB3-213ENST00000557262 NOX4Q9NPH5 578 aa13.2□□□□□ -0.3
TUBB3-213ENST00000557262 C1orf123Q9NWV4 160 aa13.2□□□□□ -0.3
TUBB3-213ENST00000557262 CTSZQ9UBR2 303 aa13.2□□□□□ -0.3
TUBB3-213ENST00000557262 BAIAP2Q9UQB8 552 aa13.2□□□□□ -0.3
TUBB3-213ENST00000557262 N6AMT1Q9Y5N5 214 aa13.2□□□□□ -0.3
TUBB3-213ENST00000557262 COMMD3-BMI1R4GMX3 469 aa13.2□□□□□ -0.3
TUBB3-213ENST00000557262 MEGF8Q7Z7M0 2845 aa13.19□□□□□ -0.3
TUBB3-213ENST00000557262 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.19□□□□□ -0.3
TUBB3-213ENST00000557262 OOEPA6NGQ2 149 aa13.19□□□□□ -0.3
TUBB3-213ENST00000557262 ZNF879B4DU55 563 aa13.19□□□□□ -0.3
TUBB3-213ENST00000557262 C3orf80F5H4A9 247 aa13.19□□□□□ -0.3
TUBB3-213ENST00000557262 P2RY10O00398 339 aa13.19□□□□□ -0.3
TUBB3-213ENST00000557262 ADAM20O43506 726 aa13.19□□□□□ -0.3
TUBB3-213ENST00000557262 GRPP07492 148 aa13.19□□□□□ -0.3
TUBB3-213ENST00000557262 SPARCP09486 303 aa13.19□□□□□ -0.3
TUBB3-213ENST00000557262 PSKH1P11801 424 aa13.19□□□□□ -0.3
TUBB3-213ENST00000557262 DDOSTP39656 456 aa13.19□□□□□ -0.3
TUBB3-213ENST00000557262 MXRA7P84157 204 aa13.19□□□□□ -0.3
TUBB3-213ENST00000557262 CYP2R1Q6VVX0 501 aa13.19□□□□□ -0.3
TUBB3-213ENST00000557262 Q6YL49 198 aa13.19□□□□□ -0.3
TUBB3-213ENST00000557262 SPATC1Q76KD6 591 aa13.19□□□□□ -0.3
TUBB3-213ENST00000557262 TAF15Q92804 592 aaKnown RBP eCLIP13.19□□□□□ -0.3
TUBB3-213ENST00000557262 PCGF1Q9BSM1 259 aa13.19□□□□□ -0.3
TUBB3-213ENST00000557262 NMNAT2Q9BZQ4 307 aa13.19□□□□□ -0.3
TUBB3-213ENST00000557262 OPA3Q9H6K4 179 aa13.19□□□□□ -0.3
TUBB3-213ENST00000557262 TBC1D23Q9NUY8 699 aa13.19□□□□□ -0.3
TUBB3-213ENST00000557262 C14orf119Q9NWQ9 140 aa13.19□□□□□ -0.3
TUBB3-213ENST00000557262 ACTR3BQ9P1U1 418 aa13.19□□□□□ -0.3
TUBB3-213ENST00000557262 KIF17Q9P2E2 1029 aa13.19□□□□□ -0.3
TUBB3-213ENST00000557262 ARL2BPQ9Y2Y0 163 aa13.19□□□□□ -0.3
TUBB3-213ENST00000557262 SRRM5B3KS81 715 aa13.18□□□□□ -0.3
TUBB3-213ENST00000557262 XRCC2O43543 280 aa13.18□□□□□ -0.3
TUBB3-213ENST00000557262 TOX4O94842 621 aa13.18□□□□□ -0.3
TUBB3-213ENST00000557262 LHBP01229 141 aa13.18□□□□□ -0.3
TUBB3-213ENST00000557262 GYPBP06028 91 aa13.18□□□□□ -0.3
TUBB3-213ENST00000557262 SLC2A1P11166 492 aa13.18□□□□□ -0.3
TUBB3-213ENST00000557262 SPI1P17947 270 aa13.18□□□□□ -0.3
TUBB3-213ENST00000557262 MDKP21741 143 aaPredicted RBP13.18□□□□□ -0.3
TUBB3-213ENST00000557262 CFHR2P36980 270 aa13.18□□□□□ -0.3
TUBB3-213ENST00000557262 MAGEA2P43356 314 aa13.18□□□□□ -0.3
TUBB3-213ENST00000557262 SLC15A1P46059 708 aa13.18□□□□□ -0.3
TUBB3-213ENST00000557262 BLVRAP53004 296 aa13.18□□□□□ -0.3
TUBB3-213ENST00000557262 SLC25A1P53007 311 aa13.18□□□□□ -0.3
TUBB3-213ENST00000557262 CRMP1Q14194 572 aa13.18□□□□□ -0.3
TUBB3-213ENST00000557262 C11orf91Q3C1V1 193 aa13.18□□□□□ -0.3
TUBB3-213ENST00000557262 ZNF826PQ6ZT77 177 aa13.18□□□□□ -0.3
TUBB3-213ENST00000557262 PIGWQ7Z7B1 504 aa13.18□□□□□ -0.3
TUBB3-213ENST00000557262 PNLDC1Q8NA58 520 aaKnown RBP13.18□□□□□ -0.3
TUBB3-213ENST00000557262 OR56B2PQ8NGI1 322 aa13.18□□□□□ -0.3
TUBB3-213ENST00000557262 SPSB4Q96A44 273 aa13.18□□□□□ -0.3
TUBB3-213ENST00000557262 FAM71F1Q96KD3 344 aaPredicted RBP13.18□□□□□ -0.3
TUBB3-213ENST00000557262 WDFY2Q96P53 400 aa13.18□□□□□ -0.3
TUBB3-213ENST00000557262 RASSF4Q9H2L5 321 aa13.18□□□□□ -0.3
TUBB3-213ENST00000557262 MMP24Q9Y5R2 645 aa13.18□□□□□ -0.3
TUBB3-213ENST00000557262 CENPVL3A0A0U1RRI6 287 aa13.17□□□□□ -0.3
TUBB3-213ENST00000557262 A0A1B0GUS0 222 aa13.17□□□□□ -0.3
TUBB3-213ENST00000557262 FAM181BA6NEQ2 426 aa13.17□□□□□ -0.3
TUBB3-213ENST00000557262 A6NLC8 198 aa13.17□□□□□ -0.3
TUBB3-213ENST00000557262 ANKRD30BLA7E2S9 258 aa13.17□□□□□ -0.3
TUBB3-213ENST00000557262 ZNF878C9JN71 531 aa13.17□□□□□ -0.3
TUBB3-213ENST00000557262 DCTN3O75935 186 aa13.17□□□□□ -0.3
TUBB3-213ENST00000557262 GYPAP02724 150 aa13.17□□□□□ -0.3
TUBB3-213ENST00000557262 CRYBA1P05813 215 aa13.17□□□□□ -0.3
TUBB3-213ENST00000557262 SFTPBP07988 381 aa13.17□□□□□ -0.3
TUBB3-213ENST00000557262 MMP9P14780 707 aa13.17□□□□□ -0.3
TUBB3-213ENST00000557262 OMGP23515 440 aa13.17□□□□□ -0.3
TUBB3-213ENST00000557262 MNAT1P51948 309 aa13.17□□□□□ -0.3
TUBB3-213ENST00000557262 GRB2P62993 217 aaKnown RBP13.17□□□□□ -0.3
TUBB3-213ENST00000557262 PPP1R8Q12972 351 aaKnown RBP13.17□□□□□ -0.3
TUBB3-213ENST00000557262 MICAQ29983 383 aa13.17□□□□□ -0.3
TUBB3-213ENST00000557262 GCSAMQ8N6F7 178 aa13.17□□□□□ -0.3
TUBB3-213ENST00000557262 AQP11Q8NBQ7 271 aa13.17□□□□□ -0.3
TUBB3-213ENST00000557262 OR2T33Q8NG76 320 aa13.17□□□□□ -0.3
TUBB3-213ENST00000557262 OR4Q3Q8NH05 313 aa13.17□□□□□ -0.3
TUBB3-213ENST00000557262 OR8S1Q8NH09 359 aa13.17□□□□□ -0.3
TUBB3-213ENST00000557262 SGK3Q96BR1 496 aa13.17□□□□□ -0.3
TUBB3-213ENST00000557262 TBX15Q96SF7 602 aa13.17□□□□□ -0.3
TUBB3-213ENST00000557262 DGCR6LQ9BY27 220 aa13.17□□□□□ -0.3
TUBB3-213ENST00000557262 MAGIXQ9H6Y5 334 aa13.17□□□□□ -0.3
TUBB3-213ENST00000557262 SP140LQ9H930 580 aa13.17□□□□□ -0.3
TUBB3-213ENST00000557262 TNFRSF19Q9NS68 423 aa13.17□□□□□ -0.3
TUBB3-213ENST00000557262 hCG_1807616A0A1W2PRN6 198 aa13.16□□□□□ -0.3
TUBB3-213ENST00000557262 DHRS12A0PJE2 317 aa13.16□□□□□ -0.3
TUBB3-213ENST00000557262 TBX1O43435 398 aa13.16□□□□□ -0.3
TUBB3-213ENST00000557262 ECDO95905 644 aaPredicted RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms