RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 ZNF319Q9P2F9 582 aa9.05□□□□□ -0.96
LINC00239-201ENST00000556973 ZNF391Q9UJN7 358 aa9.05□□□□□ -0.96
LINC00239-201ENST00000556973 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.05□□□□□ -0.96
LINC00239-201ENST00000556973 COPS3Q9UNS2 423 aa9.05□□□□□ -0.96
LINC00239-201ENST00000556973 PPP1R3CQ9UQK1 317 aa9.05□□□□□ -0.96
LINC00239-201ENST00000556973 CACNG2Q9Y698 323 aa9.05□□□□□ -0.96
LINC00239-201ENST00000556973 FLNAP21333 2647 aaKnown RBP9.04□□□□□ -0.96
LINC00239-201ENST00000556973 TMEM269A0A1B0GVZ9 245 aa9.04□□□□□ -0.96
LINC00239-201ENST00000556973 ANKRD30BLA7E2S9 258 aa9.04□□□□□ -0.96
LINC00239-201ENST00000556973 F5H5P2 479 aa9.04□□□□□ -0.96
LINC00239-201ENST00000556973 PSMD9O00233 223 aa9.04□□□□□ -0.96
LINC00239-201ENST00000556973 SLC16A6O15403 523 aa9.04□□□□□ -0.96
LINC00239-201ENST00000556973 ENTPD6O75354 484 aa9.04□□□□□ -0.96
LINC00239-201ENST00000556973 HLA-DPB1P04440 258 aa9.04□□□□□ -0.96
LINC00239-201ENST00000556973 CA6P23280 308 aa9.04□□□□□ -0.96
LINC00239-201ENST00000556973 ANOS1P23352 680 aa9.04□□□□□ -0.96
LINC00239-201ENST00000556973 MTNR1AP48039 350 aa9.04□□□□□ -0.96
LINC00239-201ENST00000556973 MMP16P51512 607 aa9.04□□□□□ -0.96
LINC00239-201ENST00000556973 RIDAP52758 137 aaKnown RBP9.04□□□□□ -0.96
LINC00239-201ENST00000556973 PSMA6P60900 246 aaKnown RBP9.04□□□□□ -0.96
LINC00239-201ENST00000556973 RCN1Q15293 331 aa9.04□□□□□ -0.96
LINC00239-201ENST00000556973 OR8G1Q15617 311 aa9.04□□□□□ -0.96
LINC00239-201ENST00000556973 SNCBQ16143 134 aa9.04□□□□□ -0.96
LINC00239-201ENST00000556973 ZNF322Q6U7Q0 402 aaPredicted RBP9.04□□□□□ -0.96
LINC00239-201ENST00000556973 KLBQ86Z14 1044 aa9.04□□□□□ -0.96
LINC00239-201ENST00000556973 SPERTQ8NA61 448 aa9.04□□□□□ -0.96
LINC00239-201ENST00000556973 ZNF555Q8NEP9 628 aa9.04□□□□□ -0.96
LINC00239-201ENST00000556973 ITFG2Q969R8 447 aa9.04□□□□□ -0.96
LINC00239-201ENST00000556973 C1orf159Q96HA4 380 aa9.04□□□□□ -0.96
LINC00239-201ENST00000556973 MEGF10Q96KG7 1140 aa9.04□□□□□ -0.96
LINC00239-201ENST00000556973 Q96MT0 163 aa9.04□□□□□ -0.96
LINC00239-201ENST00000556973 GCM1Q9NP62 436 aa9.04□□□□□ -0.96
LINC00239-201ENST00000556973 YAE1D1Q9NRH1 226 aa9.04□□□□□ -0.96
LINC00239-201ENST00000556973 IKZF2Q9UKS7 526 aa9.04□□□□□ -0.96
LINC00239-201ENST00000556973 hCG_38984A0A1B0GV85 526 aa9.03□□□□□ -0.96
LINC00239-201ENST00000556973 A0A1W2PQL4 384 aaPredicted RBP9.03□□□□□ -0.96
LINC00239-201ENST00000556973 A8MV72 311 aaPredicted RBP9.03□□□□□ -0.96
LINC00239-201ENST00000556973 CD200P41217 278 aa9.03□□□□□ -0.96
LINC00239-201ENST00000556973 GSK3AP49840 483 aa9.03□□□□□ -0.96
LINC00239-201ENST00000556973 RIPPLY3P57055 190 aa9.03□□□□□ -0.96
LINC00239-201ENST00000556973 MVKQ03426 396 aa9.03□□□□□ -0.96
LINC00239-201ENST00000556973 MZT1Q08AG7 82 aa9.03□□□□□ -0.96
LINC00239-201ENST00000556973 MAB21L1Q13394 359 aa9.03□□□□□ -0.96
LINC00239-201ENST00000556973 LRRC36Q1X8D7 754 aa9.03□□□□□ -0.96
LINC00239-201ENST00000556973 ZNF181Q2M3W8 571 aa9.03□□□□□ -0.96
LINC00239-201ENST00000556973 ZNF829Q3KNS6 432 aaPredicted RBP9.03□□□□□ -0.96
LINC00239-201ENST00000556973 LPCAT4Q643R3 524 aa9.03□□□□□ -0.96
LINC00239-201ENST00000556973 GALNT4Q8N4A0 578 aa9.03□□□□□ -0.96
LINC00239-201ENST00000556973 FTMTQ8N4E7 242 aa9.03□□□□□ -0.96
LINC00239-201ENST00000556973 PACRGLQ8N7B6 248 aa9.03□□□□□ -0.96
LINC00239-201ENST00000556973 PLPP7Q8NBV4 271 aa9.03□□□□□ -0.96
LINC00239-201ENST00000556973 CSNK2A3Q8NEV1 391 aa9.03□□□□□ -0.96
LINC00239-201ENST00000556973 OR10AD1Q8NGE0 317 aa9.03□□□□□ -0.96
LINC00239-201ENST00000556973 CLDND2Q8NHS1 167 aa9.03□□□□□ -0.96
LINC00239-201ENST00000556973 RHOXF1Q8NHV9 184 aa9.03□□□□□ -0.96
LINC00239-201ENST00000556973 ERGIC1Q969X5 290 aa9.03□□□□□ -0.96
LINC00239-201ENST00000556973 MSI2Q96DH6 328 aaKnown RBP9.03□□□□□ -0.96
LINC00239-201ENST00000556973 APOL4Q9BPW4 351 aa9.03□□□□□ -0.96
LINC00239-201ENST00000556973 DCLRE1BQ9H816 532 aa9.03□□□□□ -0.96
LINC00239-201ENST00000556973 TMEM106BQ9NUM4 274 aa9.03□□□□□ -0.96
LINC00239-201ENST00000556973 FAM206AQ9NX38 181 aa9.03□□□□□ -0.96
LINC00239-201ENST00000556973 SMPD3Q9NY59 655 aaPredicted RBP9.03□□□□□ -0.96
LINC00239-201ENST00000556973 WIPI2Q9Y4P8 454 aa9.03□□□□□ -0.96
LINC00239-201ENST00000556973 PCDHGB1Q9Y5G3 927 aa9.03□□□□□ -0.96
LINC00239-201ENST00000556973 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.02□□□□□ -0.97
LINC00239-201ENST00000556973 A0A0U1RQV5 110 aa9.02□□□□□ -0.97
LINC00239-201ENST00000556973 LOC100289279A0A1B0GTE1 492 aa9.02□□□□□ -0.97
LINC00239-201ENST00000556973 PRR32B1ATL7 298 aa9.02□□□□□ -0.97
LINC00239-201ENST00000556973 B4DSR2 109 aa9.02□□□□□ -0.97
LINC00239-201ENST00000556973 DLGAP1O14490 977 aa9.02□□□□□ -0.97
LINC00239-201ENST00000556973 WNT9BO14905 357 aa9.02□□□□□ -0.97
LINC00239-201ENST00000556973 SULT1C4O75897 302 aa9.02□□□□□ -0.97
LINC00239-201ENST00000556973 TGFAP01135 160 aa9.02□□□□□ -0.97
LINC00239-201ENST00000556973 KRT8P05787 483 aa9.02□□□□□ -0.97
LINC00239-201ENST00000556973 GABRB1P18505 474 aa9.02□□□□□ -0.97
LINC00239-201ENST00000556973 IL2RGP31785 369 aa9.02□□□□□ -0.97
LINC00239-201ENST00000556973 GATA4P43694 442 aa9.02□□□□□ -0.97
LINC00239-201ENST00000556973 LMO4P61968 165 aa9.02□□□□□ -0.97
LINC00239-201ENST00000556973 OR8B8Q15620 311 aa9.02□□□□□ -0.97
LINC00239-201ENST00000556973 GFOD2Q3B7J2 385 aa9.02□□□□□ -0.97
LINC00239-201ENST00000556973 C6orf52Q5T4I8 152 aa9.02□□□□□ -0.97
LINC00239-201ENST00000556973 AVPI1Q5T686 147 aa9.02□□□□□ -0.97
LINC00239-201ENST00000556973 ENTHD1Q8IYW4 607 aa9.02□□□□□ -0.97
LINC00239-201ENST00000556973 RFLNBQ8N5W9 214 aa9.02□□□□□ -0.97
LINC00239-201ENST00000556973 LINC01356Q8N9X3 169 aa9.02□□□□□ -0.97
LINC00239-201ENST00000556973 OR10H4Q8NGA5 316 aa9.02□□□□□ -0.97
LINC00239-201ENST00000556973 OR8B12Q8NGG6 310 aa9.02□□□□□ -0.97
LINC00239-201ENST00000556973 OR56B2PQ8NGI1 322 aa9.02□□□□□ -0.97
LINC00239-201ENST00000556973 ZNF420Q8TAQ5 688 aaPredicted RBP9.02□□□□□ -0.97
LINC00239-201ENST00000556973 LYZL4Q96KX0 146 aa9.02□□□□□ -0.97
LINC00239-201ENST00000556973 TBX5Q99593 518 aa9.02□□□□□ -0.97
LINC00239-201ENST00000556973 ADAT1Q9BUB4 502 aaKnown RBP9.02□□□□□ -0.97
LINC00239-201ENST00000556973 TTTY10Q9BZA0 68 aa9.02□□□□□ -0.97
LINC00239-201ENST00000556973 PBOV1Q9GZY1 135 aa9.02□□□□□ -0.97
LINC00239-201ENST00000556973 C14orf119Q9NWQ9 140 aa9.02□□□□□ -0.97
LINC00239-201ENST00000556973 TMEM160Q9NX00 188 aa9.02□□□□□ -0.97
LINC00239-201ENST00000556973 MRM2Q9UI43 246 aaKnown RBP9.02□□□□□ -0.97
LINC00239-201ENST00000556973 NPTNQ9Y639 398 aa9.02□□□□□ -0.97
LINC00239-201ENST00000556973 METTL15A6NJ78 407 aa9.01□□□□□ -0.97
LINC00239-201ENST00000556973 LRRC30A6NM36 301 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms