RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 CLIP4Q8N3C7 705 aa4.53□□□□□ -1.68
ATXN3-245ENST00000556958 LSMEM1Q8N8F7 131 aa4.53□□□□□ -1.68
ATXN3-245ENST00000556958 BHLHE23Q8NDY6 225 aa4.53□□□□□ -1.68
ATXN3-245ENST00000556958 AENQ8WTP8 325 aaKnown RBP4.53□□□□□ -1.68
ATXN3-245ENST00000556958 ACOT11Q8WXI4 607 aaPredicted RBP4.53□□□□□ -1.68
ATXN3-245ENST00000556958 ST6GALNAC6Q969X2 333 aa4.53□□□□□ -1.68
ATXN3-245ENST00000556958 NABP1Q96AH0 204 aa4.53□□□□□ -1.68
ATXN3-245ENST00000556958 DUS3LQ96G46 650 aaKnown RBP4.53□□□□□ -1.68
ATXN3-245ENST00000556958 MED30Q96HR3 178 aa4.53□□□□□ -1.68
ATXN3-245ENST00000556958 RAX2Q96IS3 184 aa4.53□□□□□ -1.68
ATXN3-245ENST00000556958 PPP3R2Q96LZ3 170 aa4.53□□□□□ -1.68
ATXN3-245ENST00000556958 RBP7Q96R05 134 aa4.53□□□□□ -1.68
ATXN3-245ENST00000556958 CDRT15Q96T59 188 aa4.53□□□□□ -1.68
ATXN3-245ENST00000556958 MRPL13Q9BYD1 178 aaKnown RBP4.53□□□□□ -1.68
ATXN3-245ENST00000556958 NUF2Q9BZD4 464 aa4.53□□□□□ -1.68
ATXN3-245ENST00000556958 GSTO2Q9H4Y5 243 aa4.53□□□□□ -1.68
ATXN3-245ENST00000556958 C1orf123Q9NWV4 160 aa4.53□□□□□ -1.68
ATXN3-245ENST00000556958 SLC13A4Q9UKG4 626 aa4.53□□□□□ -1.68
ATXN3-245ENST00000556958 NUP214P35658 2090 aaPredicted RBP4.52□□□□□ -1.69
ATXN3-245ENST00000556958 PRSS51A0A1B0GVH4 220 aa4.52□□□□□ -1.69
ATXN3-245ENST00000556958 A0A1B0GWA3 101 aa4.52□□□□□ -1.69
ATXN3-245ENST00000556958 hCG_1807616A0A1W2PRN6 198 aa4.52□□□□□ -1.69
ATXN3-245ENST00000556958 POLR3GO15318 223 aaPredicted RBP4.52□□□□□ -1.69
ATXN3-245ENST00000556958 DEDDO75618 318 aa4.52□□□□□ -1.69
ATXN3-245ENST00000556958 CPSF4O95639 269 aaKnown RBP4.52□□□□□ -1.69
ATXN3-245ENST00000556958 SNRNP70P08621 437 aaKnown RBP4.52□□□□□ -1.69
ATXN3-245ENST00000556958 PGA5P0DJD9 388 aa4.52□□□□□ -1.69
ATXN3-245ENST00000556958 IGHV4-30-4P0DP06 118 aa4.52□□□□□ -1.69
ATXN3-245ENST00000556958 GP9P14770 177 aa4.52□□□□□ -1.69
ATXN3-245ENST00000556958 LAP3P28838 519 aa4.52□□□□□ -1.69
ATXN3-245ENST00000556958 GRK5P34947 590 aa4.52□□□□□ -1.69
ATXN3-245ENST00000556958 PHBP35232 272 aa4.52□□□□□ -1.69
ATXN3-245ENST00000556958 TGM4P49221 684 aa4.52□□□□□ -1.69
ATXN3-245ENST00000556958 CRISP3P54108 245 aa4.52□□□□□ -1.69
ATXN3-245ENST00000556958 SLC35B1P78383 322 aa4.52□□□□□ -1.69
ATXN3-245ENST00000556958 HOXC5Q00444 222 aa4.52□□□□□ -1.69
ATXN3-245ENST00000556958 CKAP4Q07065 602 aaKnown RBP4.52□□□□□ -1.69
ATXN3-245ENST00000556958 SCRN3Q0VDG4 424 aa4.52□□□□□ -1.69
ATXN3-245ENST00000556958 KIR2DS1Q14954 304 aa4.52□□□□□ -1.69
ATXN3-245ENST00000556958 SEC23BQ15437 767 aa4.52□□□□□ -1.69
ATXN3-245ENST00000556958 OR8G1Q15617 311 aa4.52□□□□□ -1.69
ATXN3-245ENST00000556958 SSX2Q16385 188 aa4.52□□□□□ -1.69
ATXN3-245ENST00000556958 ABCA11PQ4W5N1 156 aa4.52□□□□□ -1.69
ATXN3-245ENST00000556958 WDR38Q5JTN6 314 aa4.52□□□□□ -1.69
ATXN3-245ENST00000556958 ATPAF1Q5TC12 328 aaPredicted RBP4.52□□□□□ -1.69
ATXN3-245ENST00000556958 LGALS9CQ6DKI2 356 aa4.52□□□□□ -1.69
ATXN3-245ENST00000556958 ANKRD46Q86W74 232 aa4.52□□□□□ -1.69
ATXN3-245ENST00000556958 SGPP2Q8IWX5 399 aa4.52□□□□□ -1.69
ATXN3-245ENST00000556958 RIMKLAQ8IXN7 391 aa4.52□□□□□ -1.69
ATXN3-245ENST00000556958 CLECL1Q8IZS7 167 aa4.52□□□□□ -1.69
ATXN3-245ENST00000556958 KRTCAP2Q8N6L1 136 aa4.52□□□□□ -1.69
ATXN3-245ENST00000556958 TRIML2Q8N7C3 387 aa4.52□□□□□ -1.69
ATXN3-245ENST00000556958 NOXO1Q8NFA2 376 aa4.52□□□□□ -1.69
ATXN3-245ENST00000556958 OR2T11Q8NH01 316 aa4.52□□□□□ -1.69
ATXN3-245ENST00000556958 OR4Q3Q8NH05 313 aa4.52□□□□□ -1.69
ATXN3-245ENST00000556958 FNDC8Q8TC99 324 aa4.52□□□□□ -1.69
ATXN3-245ENST00000556958 CHPT1Q8WUD6 406 aa4.52□□□□□ -1.69
ATXN3-245ENST00000556958 IFT81Q8WYA0 676 aa4.52□□□□□ -1.69
ATXN3-245ENST00000556958 APOBEC3DQ96AK3 386 aaPredicted RBP4.52□□□□□ -1.69
ATXN3-245ENST00000556958 EME1Q96AY2 570 aa4.52□□□□□ -1.69
ATXN3-245ENST00000556958 C12orf43Q96C57 262 aaKnown RBP4.52□□□□□ -1.69
ATXN3-245ENST00000556958 LYZL4Q96KX0 146 aa4.52□□□□□ -1.69
ATXN3-245ENST00000556958 MOGAT1Q96PD6 335 aa4.52□□□□□ -1.69
ATXN3-245ENST00000556958 DUX3Q96PT4 197 aa4.52□□□□□ -1.69
ATXN3-245ENST00000556958 SEPHS2Q99611 448 aa4.52□□□□□ -1.69
ATXN3-245ENST00000556958 PITX2Q99697 317 aa4.52□□□□□ -1.69
ATXN3-245ENST00000556958 DCLRE1BQ9H816 532 aa4.52□□□□□ -1.69
ATXN3-245ENST00000556958 TMEM27Q9HBJ8 222 aa4.52□□□□□ -1.69
ATXN3-245ENST00000556958 TAS2R5Q9NYW4 299 aa4.52□□□□□ -1.69
ATXN3-245ENST00000556958 PTTG3PQ9NZH4 202 aa4.52□□□□□ -1.69
ATXN3-245ENST00000556958 ZNF443Q9Y2A4 671 aaPredicted RBP4.52□□□□□ -1.69
ATXN3-245ENST00000556958 KLK5Q9Y337 293 aaPredicted RBP4.52□□□□□ -1.69
ATXN3-245ENST00000556958 UTP11Q9Y3A2 253 aaKnown RBP4.52□□□□□ -1.69
ATXN3-245ENST00000556958 TBL2Q9Y4P3 447 aaKnown RBP4.52□□□□□ -1.69
ATXN3-245ENST00000556958 A0A0G2JPF8 293 aa4.51□□□□□ -1.69
ATXN3-245ENST00000556958 TMEM247A6NEH6 219 aa4.51□□□□□ -1.69
ATXN3-245ENST00000556958 NUPR2A6NF83 97 aa4.51□□□□□ -1.69
ATXN3-245ENST00000556958 A6NLC8 198 aa4.51□□□□□ -1.69
ATXN3-245ENST00000556958 TRIM64CA6NLI5 447 aa4.51□□□□□ -1.69
ATXN3-245ENST00000556958 HNRNPCL2B2RXH8 293 aa4.51□□□□□ -1.69
ATXN3-245ENST00000556958 HNRNPCL3B7ZW38 293 aa4.51□□□□□ -1.69
ATXN3-245ENST00000556958 M0QZK8 103 aa4.51□□□□□ -1.69
ATXN3-245ENST00000556958 AZIN1O14977 448 aa4.51□□□□□ -1.69
ATXN3-245ENST00000556958 SGCEO43556 437 aa4.51□□□□□ -1.69
ATXN3-245ENST00000556958 DOK2O60496 412 aa4.51□□□□□ -1.69
ATXN3-245ENST00000556958 FMO6PO60774 539 aa4.51□□□□□ -1.69
ATXN3-245ENST00000556958 HNRNPCL1O60812 293 aaKnown RBP4.51□□□□□ -1.69
ATXN3-245ENST00000556958 PEX11AO75192 247 aa4.51□□□□□ -1.69
ATXN3-245ENST00000556958 TRMUO75648 421 aaKnown RBP4.51□□□□□ -1.69
ATXN3-245ENST00000556958 SLC2A10O95528 541 aa4.51□□□□□ -1.69
ATXN3-245ENST00000556958 PTBP3O95758 552 aaKnown RBP4.51□□□□□ -1.69
ATXN3-245ENST00000556958 VIMP08670 466 aaKnown RBP4.51□□□□□ -1.69
ATXN3-245ENST00000556958 SNRPAP09012 282 aaKnown RBP4.51□□□□□ -1.69
ATXN3-245ENST00000556958 HNRNPCL4P0DMR1 293 aa4.51□□□□□ -1.69
ATXN3-245ENST00000556958 ACADSP16219 412 aa4.51□□□□□ -1.69
ATXN3-245ENST00000556958 NDUFB7P17568 137 aa4.51□□□□□ -1.69
ATXN3-245ENST00000556958 PRKAR1BP31321 381 aa4.51□□□□□ -1.69
ATXN3-245ENST00000556958 NAA10P41227 235 aaPredicted RBP4.51□□□□□ -1.69
ATXN3-245ENST00000556958 OR3A4PP47883 348 aa4.51□□□□□ -1.69
ATXN3-245ENST00000556958 DAP3P51398 398 aaKnown RBP4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms