RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 RGCCQ9H4X1 137 aa19.31■□□□□ 0.68
TDP1-216ENST00000556867 GCM1Q9NP62 436 aa19.31■□□□□ 0.68
TDP1-216ENST00000556867 TMEM160Q9NX00 188 aa19.31■□□□□ 0.68
TDP1-216ENST00000556867 DCAF16Q9NXF7 216 aa19.31■□□□□ 0.68
TDP1-216ENST00000556867 MRPL15Q9P015 296 aaKnown RBP19.31■□□□□ 0.68
TDP1-216ENST00000556867 hCG_38984A0A1B0GV85 526 aa19.3■□□□□ 0.68
TDP1-216ENST00000556867 PRR32B1ATL7 298 aa19.3■□□□□ 0.68
TDP1-216ENST00000556867 IFNL4K9M1U5 179 aa19.3■□□□□ 0.68
TDP1-216ENST00000556867 CRLF1O75462 422 aa19.3■□□□□ 0.68
TDP1-216ENST00000556867 HLA-DPB1P04440 258 aa19.3■□□□□ 0.68
TDP1-216ENST00000556867 CFL1P23528 166 aaKnown RBP19.3■□□□□ 0.68
TDP1-216ENST00000556867 HTR1FP30939 366 aa19.3■□□□□ 0.68
TDP1-216ENST00000556867 DDOSTP39656 456 aa19.3■□□□□ 0.68
TDP1-216ENST00000556867 MMP16P51512 607 aa19.3■□□□□ 0.68
TDP1-216ENST00000556867 ZIK1Q3SY52 487 aaPredicted RBP19.3■□□□□ 0.68
TDP1-216ENST00000556867 PEG10Q86TG7 708 aaKnown RBP19.3■□□□□ 0.68
TDP1-216ENST00000556867 SLC35F2Q8IXU6 374 aa19.3■□□□□ 0.68
TDP1-216ENST00000556867 CELF2-AS1Q8N7Q2 184 aa19.3■□□□□ 0.68
TDP1-216ENST00000556867 LINC01356Q8N9X3 169 aa19.3■□□□□ 0.68
TDP1-216ENST00000556867 TRUB1Q8WWH5 349 aaKnown RBP19.3■□□□□ 0.68
TDP1-216ENST00000556867 OR8B4Q96RC9 309 aa19.3■□□□□ 0.68
TDP1-216ENST00000556867 BRD7Q9NPI1 651 aa19.3■□□□□ 0.68
TDP1-216ENST00000556867 IMPAD1Q9NX62 359 aa19.3■□□□□ 0.68
TDP1-216ENST00000556867 ZNF319Q9P2F9 582 aa19.3■□□□□ 0.68
TDP1-216ENST00000556867 JMJD1CQ15652 2540 aa19.29■□□□□ 0.68
TDP1-216ENST00000556867 PHYHO14832 338 aa19.29■□□□□ 0.68
TDP1-216ENST00000556867 LMX1BO60663 402 aa19.29■□□□□ 0.68
TDP1-216ENST00000556867 ZNF254O75437 659 aa19.29■□□□□ 0.68
TDP1-216ENST00000556867 TGFAP01135 160 aa19.29■□□□□ 0.68
TDP1-216ENST00000556867 SBK2P0C263 348 aa19.29■□□□□ 0.68
TDP1-216ENST00000556867 CA6P23280 308 aa19.29■□□□□ 0.68
TDP1-216ENST00000556867 DCTDP32321 178 aa19.29■□□□□ 0.68
TDP1-216ENST00000556867 FAM3AP98173 230 aa19.29■□□□□ 0.68
TDP1-216ENST00000556867 TMED1Q13445 227 aa19.29■□□□□ 0.68
TDP1-216ENST00000556867 ZSCAN26Q16670 478 aa19.29■□□□□ 0.68
TDP1-216ENST00000556867 ZBTB49Q6ZSB9 765 aa19.29■□□□□ 0.68
TDP1-216ENST00000556867 ZNF679Q8IYX0 411 aa19.29■□□□□ 0.68
TDP1-216ENST00000556867 RFLNBQ8N5W9 214 aa19.29■□□□□ 0.68
TDP1-216ENST00000556867 SIGLEC11Q96RL6 698 aa19.29■□□□□ 0.68
TDP1-216ENST00000556867 MBOAT4Q96T53 435 aa19.29■□□□□ 0.68
TDP1-216ENST00000556867 SLC29A1Q99808 456 aa19.29■□□□□ 0.68
TDP1-216ENST00000556867 MROQ9BYG7 248 aa19.29■□□□□ 0.68
TDP1-216ENST00000556867 CLN6Q9NWW5 311 aa19.29■□□□□ 0.68
TDP1-216ENST00000556867 KCNS2Q9ULS6 477 aa19.29■□□□□ 0.68
TDP1-216ENST00000556867 NPTNQ9Y639 398 aa19.29■□□□□ 0.68
TDP1-216ENST00000556867 GMDSO60547 372 aa19.28■□□□□ 0.68
TDP1-216ENST00000556867 BAG2O95816 211 aa19.28■□□□□ 0.68
TDP1-216ENST00000556867 CD200P41217 278 aa19.28■□□□□ 0.68
TDP1-216ENST00000556867 GATA4P43694 442 aa19.28■□□□□ 0.68
TDP1-216ENST00000556867 POU4F2Q12837 409 aa19.28■□□□□ 0.68
TDP1-216ENST00000556867 HNRNPA0Q13151 305 aaKnown RBP19.28■□□□□ 0.68
TDP1-216ENST00000556867 OR8G1Q15617 311 aa19.28■□□□□ 0.68
TDP1-216ENST00000556867 KLBQ86Z14 1044 aa19.28■□□□□ 0.68
TDP1-216ENST00000556867 OR51G2Q8NGK0 314 aa19.28■□□□□ 0.68
TDP1-216ENST00000556867 RFKQ969G6 155 aa19.28■□□□□ 0.68
TDP1-216ENST00000556867 EME1Q96AY2 570 aa19.28■□□□□ 0.68
TDP1-216ENST00000556867 ADAT1Q9BUB4 502 aaKnown RBP19.28■□□□□ 0.68
TDP1-216ENST00000556867 ZNF665Q9H7R5 613 aa19.28■□□□□ 0.68
TDP1-216ENST00000556867 ACOD1A6NK06 481 aa19.27■□□□□ 0.68
TDP1-216ENST00000556867 B4DSR2 109 aa19.27■□□□□ 0.68
TDP1-216ENST00000556867 FAM157AC9JC47 383 aa19.27■□□□□ 0.68
TDP1-216ENST00000556867 ZNF670-ZNF695F2Z2N8 137 aa19.27■□□□□ 0.68
TDP1-216ENST00000556867 PSMD9O00233 223 aa19.27■□□□□ 0.68
TDP1-216ENST00000556867 IGHV2-70P01814 119 aa19.27■□□□□ 0.68
TDP1-216ENST00000556867 CXCR4P61073 352 aa19.27■□□□□ 0.68
TDP1-216ENST00000556867 MAB21L1Q13394 359 aa19.27■□□□□ 0.68
TDP1-216ENST00000556867 ZNF181Q2M3W8 571 aa19.27■□□□□ 0.68
TDP1-216ENST00000556867 SLC25A30Q5SVS4 291 aa19.27■□□□□ 0.68
TDP1-216ENST00000556867 ZNF322Q6U7Q0 402 aaPredicted RBP19.27■□□□□ 0.68
TDP1-216ENST00000556867 OR8B12Q8NGG6 310 aa19.27■□□□□ 0.68
TDP1-216ENST00000556867 RAB39BQ96DA2 213 aa19.27■□□□□ 0.68
TDP1-216ENST00000556867 TTTY10Q9BZA0 68 aa19.27■□□□□ 0.68
TDP1-216ENST00000556867 FAM206AQ9NX38 181 aa19.27■□□□□ 0.68
TDP1-216ENST00000556867 ZNF391Q9UJN7 358 aa19.27■□□□□ 0.68
TDP1-216ENST00000556867 IKZF2Q9UKS7 526 aa19.27■□□□□ 0.68
TDP1-216ENST00000556867 ISPDA4D126 451 aa19.26■□□□□ 0.67
TDP1-216ENST00000556867 TMEM178BH3BS89 294 aa19.26■□□□□ 0.67
TDP1-216ENST00000556867 PTBP3O95758 552 aaKnown RBP19.26■□□□□ 0.67
TDP1-216ENST00000556867 IGHV2-5P01817 119 aa19.26■□□□□ 0.67
TDP1-216ENST00000556867 GSK3AP49840 483 aa19.26■□□□□ 0.67
TDP1-216ENST00000556867 RIDAP52758 137 aaKnown RBP19.26■□□□□ 0.67
TDP1-216ENST00000556867 SNRPGP62308 76 aaKnown RBP19.26■□□□□ 0.67
TDP1-216ENST00000556867 OR8B8Q15620 311 aa19.26■□□□□ 0.67
TDP1-216ENST00000556867 GFOD2Q3B7J2 385 aa19.26■□□□□ 0.67
TDP1-216ENST00000556867 MOGAT3Q86VF5 341 aa19.26■□□□□ 0.67
TDP1-216ENST00000556867 UBE2FQ969M7 185 aa19.26■□□□□ 0.67
TDP1-216ENST00000556867 ERGIC1Q969X5 290 aa19.26■□□□□ 0.67
TDP1-216ENST00000556867 GAL3ST1Q99999 423 aa19.26■□□□□ 0.67
TDP1-216ENST00000556867 TMEM269A0A1B0GVZ9 245 aa19.25■□□□□ 0.67
TDP1-216ENST00000556867 ANKRD30BLA7E2S9 258 aa19.25■□□□□ 0.67
TDP1-216ENST00000556867 RBMXP38159 391 aaKnown RBP19.25■□□□□ 0.67
TDP1-216ENST00000556867 DVL1P1P54792 670 aaPredicted RBP19.25■□□□□ 0.67
TDP1-216ENST00000556867 BTG1P62324 171 aa19.25■□□□□ 0.67
TDP1-216ENST00000556867 GABPB1Q06547 395 aaPredicted RBP19.25■□□□□ 0.67
TDP1-216ENST00000556867 EGR3Q06889 387 aa19.25■□□□□ 0.67
TDP1-216ENST00000556867 ZNF829Q3KNS6 432 aaPredicted RBP19.25■□□□□ 0.67
TDP1-216ENST00000556867 SPERTQ8NA61 448 aa19.25■□□□□ 0.67
TDP1-216ENST00000556867 ZNF420Q8TAQ5 688 aaPredicted RBP19.25■□□□□ 0.67
TDP1-216ENST00000556867 Q8TCH9 128 aa19.25■□□□□ 0.67
TDP1-216ENST00000556867 CDC42EP3Q9UKI2 254 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms