RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 PRSS12P56730 875 aa9.79□□□□□ -0.84
ACTN1-221ENST00000556571 HOXA4Q00056 320 aaPredicted RBP9.79□□□□□ -0.84
ACTN1-221ENST00000556571 ECH1Q13011 328 aa9.79□□□□□ -0.84
ACTN1-221ENST00000556571 HERPUD1Q15011 391 aa9.79□□□□□ -0.84
ACTN1-221ENST00000556571 KRTAP27-1Q3LI81 207 aa9.79□□□□□ -0.84
ACTN1-221ENST00000556571 DNM1P34Q6PK57 102 aa9.79□□□□□ -0.84
ACTN1-221ENST00000556571 TBPL2Q6SJ96 375 aa9.79□□□□□ -0.84
ACTN1-221ENST00000556571 Q6ZTK2 550 aa9.79□□□□□ -0.84
ACTN1-221ENST00000556571 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.79□□□□□ -0.84
ACTN1-221ENST00000556571 PDZD9Q8IXQ8 264 aa9.79□□□□□ -0.84
ACTN1-221ENST00000556571 FAM53CQ9NYF3 392 aa9.79□□□□□ -0.84
ACTN1-221ENST00000556571 ZNRD1Q9P1U0 126 aa9.79□□□□□ -0.84
ACTN1-221ENST00000556571 KAAG1Q9UBP8 84 aa9.79□□□□□ -0.84
ACTN1-221ENST00000556571 FBLN5Q9UBX5 448 aa9.79□□□□□ -0.84
ACTN1-221ENST00000556571 TMEM5Q9Y2B1 443 aa9.79□□□□□ -0.84
ACTN1-221ENST00000556571 SNX13Q9Y5W8 968 aa9.79□□□□□ -0.84
ACTN1-221ENST00000556571 KMT2CQ8NEZ4 4911 aaKnown RBP9.78□□□□□ -0.84
ACTN1-221ENST00000556571 F5H5K5 113 aa9.78□□□□□ -0.84
ACTN1-221ENST00000556571 SOCS2O14508 198 aa9.78□□□□□ -0.84
ACTN1-221ENST00000556571 IMPA2O14732 288 aa9.78□□□□□ -0.84
ACTN1-221ENST00000556571 GYPAP02724 150 aa9.78□□□□□ -0.84
ACTN1-221ENST00000556571 PRB2P02812 416 aaPredicted RBP9.78□□□□□ -0.84
ACTN1-221ENST00000556571 LCATP04180 440 aa9.78□□□□□ -0.84
ACTN1-221ENST00000556571 FAM189A2Q15884 450 aa9.78□□□□□ -0.84
ACTN1-221ENST00000556571 MEP1BQ16820 701 aa9.78□□□□□ -0.84
ACTN1-221ENST00000556571 SLC35E4Q6ICL7 350 aa9.78□□□□□ -0.84
ACTN1-221ENST00000556571 CORO6Q6QEF8 472 aa9.78□□□□□ -0.84
ACTN1-221ENST00000556571 METAP1DQ6UB28 335 aaPredicted RBP9.78□□□□□ -0.84
ACTN1-221ENST00000556571 PTCHD4Q6ZW05 846 aa9.78□□□□□ -0.84
ACTN1-221ENST00000556571 MRPL21Q7Z2W9 205 aaKnown RBP9.78□□□□□ -0.84
ACTN1-221ENST00000556571 VMO1Q7Z5L0 202 aa9.78□□□□□ -0.84
ACTN1-221ENST00000556571 SPERTQ8NA61 448 aa9.78□□□□□ -0.84
ACTN1-221ENST00000556571 OR5R1Q8NH85 324 aa9.78□□□□□ -0.84
ACTN1-221ENST00000556571 PPP1R14AQ96A00 147 aa9.78□□□□□ -0.84
ACTN1-221ENST00000556571 MCUR1Q96AQ8 359 aa9.78□□□□□ -0.84
ACTN1-221ENST00000556571 DMRTB1Q96MA1 342 aa9.78□□□□□ -0.84
ACTN1-221ENST00000556571 NSMCE2Q96MF7 247 aa9.78□□□□□ -0.84
ACTN1-221ENST00000556571 GPX7Q96SL4 187 aaPredicted RBP9.78□□□□□ -0.84
ACTN1-221ENST00000556571 PITX2Q99697 317 aa9.78□□□□□ -0.84
ACTN1-221ENST00000556571 GORASP2Q9H8Y8 452 aa9.78□□□□□ -0.84
ACTN1-221ENST00000556571 DCAF13Q9NV06 445 aaKnown RBP9.78□□□□□ -0.84
ACTN1-221ENST00000556571 C1orf123Q9NWV4 160 aa9.78□□□□□ -0.84
ACTN1-221ENST00000556571 RPUSD1Q9UJJ7 312 aaKnown RBP9.78□□□□□ -0.84
ACTN1-221ENST00000556571 AURKCQ9UQB9 309 aa9.78□□□□□ -0.84
ACTN1-221ENST00000556571 IER3IP1Q9Y5U9 82 aa9.78□□□□□ -0.84
ACTN1-221ENST00000556571 ANKRD61A6NGH8 418 aa9.77□□□□□ -0.85
ACTN1-221ENST00000556571 CD300LBA8K4G0 201 aa9.77□□□□□ -0.85
ACTN1-221ENST00000556571 RNASEK-C17orf49H0YIS7 233 aa9.77□□□□□ -0.85
ACTN1-221ENST00000556571 GPR37O15354 613 aa9.77□□□□□ -0.85
ACTN1-221ENST00000556571 PPP1R3DO95685 299 aa9.77□□□□□ -0.85
ACTN1-221ENST00000556571 TXNDC12O95881 172 aa9.77□□□□□ -0.85
ACTN1-221ENST00000556571 EEF1B2P24534 225 aaKnown RBP9.77□□□□□ -0.85
ACTN1-221ENST00000556571 GABRA5P31644 462 aa9.77□□□□□ -0.85
ACTN1-221ENST00000556571 CDKN2AP42771 156 aaKnown RBP9.77□□□□□ -0.85
ACTN1-221ENST00000556571 RPS6KA3P51812 740 aa9.77□□□□□ -0.85
ACTN1-221ENST00000556571 TPTEP56180 551 aa9.77□□□□□ -0.85
ACTN1-221ENST00000556571 GUCA2AQ02747 115 aa9.77□□□□□ -0.85
ACTN1-221ENST00000556571 MZT1Q08AG7 82 aa9.77□□□□□ -0.85
ACTN1-221ENST00000556571 TRAP1Q12931 704 aaKnown RBP9.77□□□□□ -0.85
ACTN1-221ENST00000556571 SLC36A3Q495N2 470 aa9.77□□□□□ -0.85
ACTN1-221ENST00000556571 C11orf88Q6PI97 169 aa9.77□□□□□ -0.85
ACTN1-221ENST00000556571 DPY19L2P2Q6ZN68 376 aa9.77□□□□□ -0.85
ACTN1-221ENST00000556571 TSEN54Q7Z6J9 526 aaKnown RBP9.77□□□□□ -0.85
ACTN1-221ENST00000556571 FAM90A1Q86YD7 464 aa9.77□□□□□ -0.85
ACTN1-221ENST00000556571 CMTM4Q8IZR5 234 aa9.77□□□□□ -0.85
ACTN1-221ENST00000556571 ARHGAP24Q8N264 748 aa9.77□□□□□ -0.85
ACTN1-221ENST00000556571 ST8SIA4Q92187 359 aa9.77□□□□□ -0.85
ACTN1-221ENST00000556571 TSSK2Q96PF2 358 aa9.77□□□□□ -0.85
ACTN1-221ENST00000556571 ATF6BQ99941 703 aa9.77□□□□□ -0.85
ACTN1-221ENST00000556571 ADAT1Q9BUB4 502 aaKnown RBP9.77□□□□□ -0.85
ACTN1-221ENST00000556571 ANKRD19PQ9H560 264 aa9.77□□□□□ -0.85
ACTN1-221ENST00000556571 KRCC1Q9NPI7 259 aaPredicted RBP9.77□□□□□ -0.85
ACTN1-221ENST00000556571 SIGLEC7Q9Y286 467 aa9.77□□□□□ -0.85
ACTN1-221ENST00000556571 ENPP4Q9Y6X5 453 aa9.77□□□□□ -0.85
ACTN1-221ENST00000556571 V9GYQ6 96 aa9.77□□□□□ -0.85
ACTN1-221ENST00000556571 IGLV1-36A0A0B4J1U3 117 aa9.76□□□□□ -0.85
ACTN1-221ENST00000556571 DCTN6O00399 190 aa9.76□□□□□ -0.85
ACTN1-221ENST00000556571 ARPC2O15144 300 aa9.76□□□□□ -0.85
ACTN1-221ENST00000556571 FCN3O75636 299 aa9.76□□□□□ -0.85
ACTN1-221ENST00000556571 PAHP00439 452 aa9.76□□□□□ -0.85
ACTN1-221ENST00000556571 LHBP01229 141 aa9.76□□□□□ -0.85
ACTN1-221ENST00000556571 RHCEP18577 417 aa9.76□□□□□ -0.85
ACTN1-221ENST00000556571 MSX2P35548 267 aaPredicted RBP9.76□□□□□ -0.85
ACTN1-221ENST00000556571 GGT2P36268 569 aa9.76□□□□□ -0.85
ACTN1-221ENST00000556571 FGD3Q5JSP0 725 aa9.76□□□□□ -0.85
ACTN1-221ENST00000556571 TEX36Q5VZQ5 186 aa9.76□□□□□ -0.85
ACTN1-221ENST00000556571 SLC18B1Q6NT16 456 aa9.76□□□□□ -0.85
ACTN1-221ENST00000556571 CFAP77Q6ZQR2 320 aa9.76□□□□□ -0.85
ACTN1-221ENST00000556571 TRPM8Q7Z2W7 1104 aa9.76□□□□□ -0.85
ACTN1-221ENST00000556571 NAA40Q86UY6 237 aa9.76□□□□□ -0.85
ACTN1-221ENST00000556571 GCSAMQ8N6F7 178 aa9.76□□□□□ -0.85
ACTN1-221ENST00000556571 LY6G5BQ8NDX9 201 aa9.76□□□□□ -0.85
ACTN1-221ENST00000556571 SLC26A10Q8NG04 563 aa9.76□□□□□ -0.85
ACTN1-221ENST00000556571 OR2AJ1Q8NGZ0 328 aa9.76□□□□□ -0.85
ACTN1-221ENST00000556571 MRAPQ8TCY5 172 aa9.76□□□□□ -0.85
ACTN1-221ENST00000556571 PYURFQ96I23 114 aa9.76□□□□□ -0.85
ACTN1-221ENST00000556571 FAM46AQ96IP4 442 aaKnown RBP9.76□□□□□ -0.85
ACTN1-221ENST00000556571 SEMA6AQ9H2E6 1030 aa9.76□□□□□ -0.85
ACTN1-221ENST00000556571 SRA1Q9HD15 236 aaKnown RBP9.76□□□□□ -0.85
ACTN1-221ENST00000556571 MRPL15Q9P015 296 aaKnown RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms