RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 TMEM33P57088 247 aa8.18□□□□□ -1.1
SRP54-210ENST00000556380 ADARB1P78563 741 aaKnown RBP8.18□□□□□ -1.1
SRP54-210ENST00000556380 CCL8P80075 99 aa8.18□□□□□ -1.1
SRP54-210ENST00000556380 LOXL1Q08397 574 aaPredicted RBP8.18□□□□□ -1.1
SRP54-210ENST00000556380 MALLQ13021 153 aa8.18□□□□□ -1.1
SRP54-210ENST00000556380 TSTQ16762 297 aaKnown RBP8.18□□□□□ -1.1
SRP54-210ENST00000556380 ZNF684Q5T5D7 378 aa8.18□□□□□ -1.1
SRP54-210ENST00000556380 SHISA2Q6UWI4 295 aa8.18□□□□□ -1.1
SRP54-210ENST00000556380 LRRN1Q6UXK5 716 aa8.18□□□□□ -1.1
SRP54-210ENST00000556380 USP51Q70EK9 711 aa8.18□□□□□ -1.1
SRP54-210ENST00000556380 BIVMQ86UB2 503 aa8.18□□□□□ -1.1
SRP54-210ENST00000556380 SLC35F2Q8IXU6 374 aa8.18□□□□□ -1.1
SRP54-210ENST00000556380 ENTHD1Q8IYW4 607 aa8.18□□□□□ -1.1
SRP54-210ENST00000556380 ZNF679Q8IYX0 411 aa8.18□□□□□ -1.1
SRP54-210ENST00000556380 OR51G2Q8NGK0 314 aa8.18□□□□□ -1.1
SRP54-210ENST00000556380 OR2AE1Q8NHA4 323 aa8.18□□□□□ -1.1
SRP54-210ENST00000556380 ASB17Q8WXJ9 295 aa8.18□□□□□ -1.1
SRP54-210ENST00000556380 RFKQ969G6 155 aa8.18□□□□□ -1.1
SRP54-210ENST00000556380 OR8B4Q96RC9 309 aa8.18□□□□□ -1.1
SRP54-210ENST00000556380 DIRC2Q96SL1 478 aa8.18□□□□□ -1.1
SRP54-210ENST00000556380 DCLRE1BQ9H816 532 aa8.18□□□□□ -1.1
SRP54-210ENST00000556380 NIPAL2Q9H841 368 aa8.18□□□□□ -1.1
SRP54-210ENST00000556380 FAM206AQ9NX38 181 aa8.18□□□□□ -1.1
SRP54-210ENST00000556380 IMPAD1Q9NX62 359 aa8.18□□□□□ -1.1
SRP54-210ENST00000556380 SMPD3Q9NY59 655 aaPredicted RBP8.18□□□□□ -1.1
SRP54-210ENST00000556380 LRP12Q9Y561 859 aa8.18□□□□□ -1.1
SRP54-210ENST00000556380 GMPPBQ9Y5P6 360 aa8.18□□□□□ -1.1
SRP54-210ENST00000556380 TMEM14AQ9Y6G1 99 aa8.18□□□□□ -1.1
SRP54-210ENST00000556380 C2CD3Q4AC94 2353 aa8.17□□□□□ -1.1
SRP54-210ENST00000556380 IGHV4-61A0A0C4DH41 118 aa8.17□□□□□ -1.1
SRP54-210ENST00000556380 A0A1W2PQL4 384 aaPredicted RBP8.17□□□□□ -1.1
SRP54-210ENST00000556380 ACOD1A6NK06 481 aa8.17□□□□□ -1.1
SRP54-210ENST00000556380 H0YL77 283 aa8.17□□□□□ -1.1
SRP54-210ENST00000556380 PSMD9O00233 223 aa8.17□□□□□ -1.1
SRP54-210ENST00000556380 MAGEB4O15481 346 aaPredicted RBP8.17□□□□□ -1.1
SRP54-210ENST00000556380 MLNRO43193 412 aa8.17□□□□□ -1.1
SRP54-210ENST00000556380 LY6G6DO95868 133 aa8.17□□□□□ -1.1
SRP54-210ENST00000556380 TACSTD2P09758 323 aa8.17□□□□□ -1.1
SRP54-210ENST00000556380 OR2T7P0C7T2 308 aa8.17□□□□□ -1.1
SRP54-210ENST00000556380 SELEP16581 610 aa8.17□□□□□ -1.1
SRP54-210ENST00000556380 HSD11B1P28845 292 aa8.17□□□□□ -1.1
SRP54-210ENST00000556380 FAM3AP98173 230 aa8.17□□□□□ -1.1
SRP54-210ENST00000556380 LRRC36Q1X8D7 754 aa8.17□□□□□ -1.1
SRP54-210ENST00000556380 ZMAT1Q5H9K5 638 aa8.17□□□□□ -1.1
SRP54-210ENST00000556380 MEDAGQ5VYS4 303 aa8.17□□□□□ -1.1
SRP54-210ENST00000556380 KCTD18Q6PI47 426 aaPredicted RBP8.17□□□□□ -1.1
SRP54-210ENST00000556380 ZNF322Q6U7Q0 402 aaPredicted RBP8.17□□□□□ -1.1
SRP54-210ENST00000556380 FAM57BQ71RH2 274 aa8.17□□□□□ -1.1
SRP54-210ENST00000556380 PGAP1Q75T13 922 aa8.17□□□□□ -1.1
SRP54-210ENST00000556380 SSX6Q7RTT6 188 aa8.17□□□□□ -1.1
SRP54-210ENST00000556380 KRT77Q7Z794 578 aa8.17□□□□□ -1.1
SRP54-210ENST00000556380 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.17□□□□□ -1.1
SRP54-210ENST00000556380 OR5AS1Q8N127 324 aa8.17□□□□□ -1.1
SRP54-210ENST00000556380 ZNF540Q8NDQ6 660 aa8.17□□□□□ -1.1
SRP54-210ENST00000556380 OR2Z1Q8NG97 314 aa8.17□□□□□ -1.1
SRP54-210ENST00000556380 OR52H1Q8NGJ2 320 aa8.17□□□□□ -1.1
SRP54-210ENST00000556380 OR13G1Q8NGZ3 307 aa8.17□□□□□ -1.1
SRP54-210ENST00000556380 OR2T27Q8NH04 317 aa8.17□□□□□ -1.1
SRP54-210ENST00000556380 APH1BQ8WW43 257 aa8.17□□□□□ -1.1
SRP54-210ENST00000556380 ELMOD3Q96FG2 381 aa8.17□□□□□ -1.1
SRP54-210ENST00000556380 APOL4Q9BPW4 351 aa8.17□□□□□ -1.1
SRP54-210ENST00000556380 BPESC1Q9GZL8 116 aa8.17□□□□□ -1.1
SRP54-210ENST00000556380 SP140LQ9H930 580 aa8.17□□□□□ -1.1
SRP54-210ENST00000556380 CHODLQ9H9P2 273 aa8.17□□□□□ -1.1
SRP54-210ENST00000556380 DECR2Q9NUI1 292 aa8.17□□□□□ -1.1
SRP54-210ENST00000556380 TMEM100Q9NV29 134 aa8.17□□□□□ -1.1
SRP54-210ENST00000556380 MRPS18AQ9NVS2 196 aaKnown RBP8.17□□□□□ -1.1
SRP54-210ENST00000556380 MRM2Q9UI43 246 aaKnown RBP8.17□□□□□ -1.1
SRP54-210ENST00000556380 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.17□□□□□ -1.1
SRP54-210ENST00000556380 EXOGQ9Y2C4 368 aaKnown RBP8.17□□□□□ -1.1
SRP54-210ENST00000556380 N6AMT1Q9Y5N5 214 aa8.17□□□□□ -1.1
SRP54-210ENST00000556380 CACNG2Q9Y698 323 aa8.17□□□□□ -1.1
SRP54-210ENST00000556380 MXRA5Q9NR99 2828 aa8.16□□□□□ -1.1
SRP54-210ENST00000556380 IGHV1-69-2A0A0G2JMI3 117 aa8.16□□□□□ -1.1
SRP54-210ENST00000556380 hCG_38984A0A1B0GV85 526 aa8.16□□□□□ -1.1
SRP54-210ENST00000556380 PHYHO14832 338 aa8.16□□□□□ -1.1
SRP54-210ENST00000556380 XRCC2O43543 280 aa8.16□□□□□ -1.1
SRP54-210ENST00000556380 MPZL2O60487 215 aa8.16□□□□□ -1.1
SRP54-210ENST00000556380 CDC14BO60729 498 aa8.16□□□□□ -1.1
SRP54-210ENST00000556380 WBP4O75554 376 aaKnown RBP8.16□□□□□ -1.1
SRP54-210ENST00000556380 APOL3O95236 402 aa8.16□□□□□ -1.1
SRP54-210ENST00000556380 PTBP3O95758 552 aaKnown RBP8.16□□□□□ -1.1
SRP54-210ENST00000556380 PNPP00491 289 aa8.16□□□□□ -1.1
SRP54-210ENST00000556380 IGLV3-1P01715 115 aa8.16□□□□□ -1.1
SRP54-210ENST00000556380 ANXA2P07355 339 aaKnown RBP8.16□□□□□ -1.1
SRP54-210ENST00000556380 CR1P17927 2039 aa8.16□□□□□ -1.1
SRP54-210ENST00000556380 USF1P22415 310 aaPredicted RBP8.16□□□□□ -1.1
SRP54-210ENST00000556380 MTNR1AP48039 350 aa8.16□□□□□ -1.1
SRP54-210ENST00000556380 CXCR4P61073 352 aa8.16□□□□□ -1.1
SRP54-210ENST00000556380 ISL1P61371 349 aa8.16□□□□□ -1.1
SRP54-210ENST00000556380 TNFAIP6P98066 277 aaPredicted RBP8.16□□□□□ -1.1
SRP54-210ENST00000556380 ZNF85Q03923 595 aa8.16□□□□□ -1.1
SRP54-210ENST00000556380 SLC34A1Q06495 639 aa8.16□□□□□ -1.1
SRP54-210ENST00000556380 EGR3Q06889 387 aa8.16□□□□□ -1.1
SRP54-210ENST00000556380 HNRNPA0Q13151 305 aaKnown RBP8.16□□□□□ -1.1
SRP54-210ENST00000556380 CARTPTQ16568 116 aa8.16□□□□□ -1.1
SRP54-210ENST00000556380 C11orf91Q3C1V1 193 aa8.16□□□□□ -1.1
SRP54-210ENST00000556380 ZNF691Q5VV52 312 aa8.16□□□□□ -1.1
SRP54-210ENST00000556380 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.16□□□□□ -1.12e-11■■■■□ 20.4
SRP54-210ENST00000556380 KRT74Q7RTS7 529 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms