RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 TRAPPC2LH3BP13 241 aa9.92□□□□□ -0.82
VRK1-204ENST00000555351 NDUFA2O43678 99 aa9.92□□□□□ -0.82
VRK1-204ENST00000555351 FKBP6O75344 327 aa9.92□□□□□ -0.82
VRK1-204ENST00000555351 PRR23D2P0DMB1 279 aaPredicted RBP9.92□□□□□ -0.82
VRK1-204ENST00000555351 CLUP10909 449 aa9.92□□□□□ -0.82
VRK1-204ENST00000555351 CA6P23280 308 aa9.92□□□□□ -0.82
VRK1-204ENST00000555351 PRKXP51817 358 aa9.92□□□□□ -0.82
VRK1-204ENST00000555351 CBX1P83916 185 aa9.92□□□□□ -0.82
VRK1-204ENST00000555351 PAX2Q02962 417 aa9.92□□□□□ -0.82
VRK1-204ENST00000555351 ZNF154Q13106 437 aa9.92□□□□□ -0.82
VRK1-204ENST00000555351 EIF2B1Q14232 305 aaKnown RBP9.92□□□□□ -0.82
VRK1-204ENST00000555351 GINS1Q14691 196 aa9.92□□□□□ -0.82
VRK1-204ENST00000555351 C11orf91Q3C1V1 193 aa9.92□□□□□ -0.82
VRK1-204ENST00000555351 GLYATL3Q5SZD4 288 aa9.92□□□□□ -0.82
VRK1-204ENST00000555351 NLRC3Q7RTR2 1065 aa9.92□□□□□ -0.82
VRK1-204ENST00000555351 PRSS45Q7RTY3 260 aa9.92□□□□□ -0.82
VRK1-204ENST00000555351 DPY19L4Q7Z388 723 aa9.92□□□□□ -0.82
VRK1-204ENST00000555351 TMEM179BQ7Z7N9 219 aa9.92□□□□□ -0.82
VRK1-204ENST00000555351 PARP8Q8N3A8 854 aa9.92□□□□□ -0.82
VRK1-204ENST00000555351 OR6N2Q8NGY6 317 aa9.92□□□□□ -0.82
VRK1-204ENST00000555351 ZNF420Q8TAQ5 688 aaPredicted RBP9.92□□□□□ -0.82
VRK1-204ENST00000555351 TMEM246Q9BRR3 403 aa9.92□□□□□ -0.82
VRK1-204ENST00000555351 ADAT1Q9BUB4 502 aaKnown RBP9.92□□□□□ -0.82
VRK1-204ENST00000555351 MRI1Q9BV20 369 aa9.92□□□□□ -0.82
VRK1-204ENST00000555351 ABHD6Q9BV23 337 aa9.92□□□□□ -0.82
VRK1-204ENST00000555351 SSBP3Q9BWW4 388 aaPredicted RBP9.92□□□□□ -0.82
VRK1-204ENST00000555351 NIPAL2Q9H841 368 aa9.92□□□□□ -0.82
VRK1-204ENST00000555351 NTN4Q9HB63 628 aa9.92□□□□□ -0.82
VRK1-204ENST00000555351 SLC25A19Q9HC21 320 aa9.92□□□□□ -0.82
VRK1-204ENST00000555351 C14orf119Q9NWQ9 140 aa9.92□□□□□ -0.82
VRK1-204ENST00000555351 RNF7Q9UBF6 113 aa9.92□□□□□ -0.82
VRK1-204ENST00000555351 OR5V1Q9UGF6 321 aa9.92□□□□□ -0.82
VRK1-204ENST00000555351 ZNF391Q9UJN7 358 aa9.92□□□□□ -0.82
VRK1-204ENST00000555351 PHYHO14832 338 aa9.91□□□□□ -0.82
VRK1-204ENST00000555351 GSC2O15499 205 aa9.91□□□□□ -0.82
VRK1-204ENST00000555351 ATP5HO75947 161 aa9.91□□□□□ -0.82
VRK1-204ENST00000555351 VENTXO95231 258 aa9.91□□□□□ -0.82
VRK1-204ENST00000555351 CYB5R3P00387 301 aaPredicted RBP9.91□□□□□ -0.82
VRK1-204ENST00000555351 HLA-DPB1P04440 258 aa9.91□□□□□ -0.82
VRK1-204ENST00000555351 RPS2P15880 293 aaKnown RBP9.91□□□□□ -0.82
VRK1-204ENST00000555351 HSD11B1P28845 292 aa9.91□□□□□ -0.82
VRK1-204ENST00000555351 PMELP40967 661 aa9.91□□□□□ -0.82
VRK1-204ENST00000555351 OPRL1P41146 370 aa9.91□□□□□ -0.82
VRK1-204ENST00000555351 NPY4RP50391 375 aa9.91□□□□□ -0.82
VRK1-204ENST00000555351 PAX8Q06710 450 aa9.91□□□□□ -0.82
VRK1-204ENST00000555351 BNIP1Q12981 228 aa9.91□□□□□ -0.82
VRK1-204ENST00000555351 LRRN1Q6UXK5 716 aa9.91□□□□□ -0.82
VRK1-204ENST00000555351 ERI1Q8IV48 349 aaKnown RBP9.91□□□□□ -0.82
VRK1-204ENST00000555351 FTMTQ8N4E7 242 aa9.91□□□□□ -0.82
VRK1-204ENST00000555351 IQCF1Q8N6M8 205 aa9.91□□□□□ -0.82
VRK1-204ENST00000555351 OR8B3Q8NGG8 313 aa9.91□□□□□ -0.82
VRK1-204ENST00000555351 OR2AE1Q8NHA4 323 aa9.91□□□□□ -0.82
VRK1-204ENST00000555351 OTOSQ8NHW6 89 aa9.91□□□□□ -0.82
VRK1-204ENST00000555351 FAM216AQ8WUB2 273 aa9.91□□□□□ -0.82
VRK1-204ENST00000555351 DVL3Q92997 716 aaPredicted RBP9.91□□□□□ -0.82
VRK1-204ENST00000555351 DACT3Q96B18 629 aaPredicted RBP9.91□□□□□ -0.82
VRK1-204ENST00000555351 OR8B2Q96RD0 313 aa9.91□□□□□ -0.82
VRK1-204ENST00000555351 AUP1Q9Y679 476 aa9.91□□□□□ -0.82
VRK1-204ENST00000555351 ACOD1A6NK06 481 aa9.9□□□□□ -0.82
VRK1-204ENST00000555351 FAM183AA6NL82 134 aa9.9□□□□□ -0.82
VRK1-204ENST00000555351 ANKRD30BLA7E2S9 258 aa9.9□□□□□ -0.82
VRK1-204ENST00000555351 TRIM77I1YAP6 450 aa9.9□□□□□ -0.82
VRK1-204ENST00000555351 FAM20BO75063 409 aa9.9□□□□□ -0.82
VRK1-204ENST00000555351 TIPRLO75663 272 aa9.9□□□□□ -0.82
VRK1-204ENST00000555351 LYNP07948 512 aa9.9□□□□□ -0.82
VRK1-204ENST00000555351 POU1F1P28069 291 aa9.9□□□□□ -0.82
VRK1-204ENST00000555351 PSMB10P40306 273 aa9.9□□□□□ -0.82
VRK1-204ENST00000555351 CX3CR1P49238 355 aa9.9□□□□□ -0.82
VRK1-204ENST00000555351 SEC61A1P61619 476 aaKnown RBP9.9□□□□□ -0.82
VRK1-204ENST00000555351 GNB2P62879 340 aa9.9□□□□□ -0.82
VRK1-204ENST00000555351 FAM3AP98173 230 aa9.9□□□□□ -0.82
VRK1-204ENST00000555351 TIGD6Q17RP2 521 aa9.9□□□□□ -0.82
VRK1-204ENST00000555351 PLBD1Q6P4A8 553 aa9.9□□□□□ -0.82
VRK1-204ENST00000555351 FAHD1Q6P587 224 aa9.9□□□□□ -0.82
VRK1-204ENST00000555351 DEGS2Q6QHC5 323 aa9.9□□□□□ -0.82
VRK1-204ENST00000555351 BTNL3Q6UXE8 466 aa9.9□□□□□ -0.82
VRK1-204ENST00000555351 BPIFB2Q8N4F0 458 aa9.9□□□□□ -0.82
VRK1-204ENST00000555351 CSNK2A3Q8NEV1 391 aa9.9□□□□□ -0.82
VRK1-204ENST00000555351 OR56B2PQ8NGI1 322 aa9.9□□□□□ -0.82
VRK1-204ENST00000555351 RAB40AQ8WXH6 277 aa9.9□□□□□ -0.82
VRK1-204ENST00000555351 UTP4Q969X6 686 aaKnown RBP9.9□□□□□ -0.82
VRK1-204ENST00000555351 CADM1Q9BY67 442 aaKnown RBP9.9□□□□□ -0.82
VRK1-204ENST00000555351 OR10A2Q9H208 303 aa9.9□□□□□ -0.82
VRK1-204ENST00000555351 MED20Q9H944 212 aa9.9□□□□□ -0.82
VRK1-204ENST00000555351 ABCB9Q9NP78 766 aa9.9□□□□□ -0.82
VRK1-204ENST00000555351 MMP26Q9NRE1 261 aa9.9□□□□□ -0.82
VRK1-204ENST00000555351 NUP50Q9UKX7 468 aa9.9□□□□□ -0.82
VRK1-204ENST00000555351 TRAV38-1A0A0B4J264 116 aa9.89□□□□□ -0.83
VRK1-204ENST00000555351 IGHV2-70DA0A0C4DH43 119 aa9.89□□□□□ -0.83
VRK1-204ENST00000555351 KIR2DS1A0A191URI9 304 aa9.89□□□□□ -0.83
VRK1-204ENST00000555351 hCG_38984A0A1B0GV85 526 aa9.89□□□□□ -0.83
VRK1-204ENST00000555351 LGALS8O00214 317 aa9.89□□□□□ -0.83
VRK1-204ENST00000555351 ANXA2P07355 339 aaKnown RBP9.89□□□□□ -0.83
VRK1-204ENST00000555351 H2BFMP0C1H6 154 aa9.89□□□□□ -0.83
VRK1-204ENST00000555351 SLC2A5P22732 501 aa9.89□□□□□ -0.83
VRK1-204ENST00000555351 DCTDP32321 178 aa9.89□□□□□ -0.83
VRK1-204ENST00000555351 CFHR2P36980 270 aa9.89□□□□□ -0.83
VRK1-204ENST00000555351 PITPNBP48739 271 aa9.89□□□□□ -0.83
VRK1-204ENST00000555351 COMPP49747 757 aaPredicted RBP9.89□□□□□ -0.83
VRK1-204ENST00000555351 CRISP1P54107 249 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms