RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 ABHD6Q9BV23 337 aa15.29■□□□□ 0.04
SHOX-204ENST00000554971 SRXN1Q9BYN0 137 aa15.29■□□□□ 0.04
SHOX-204ENST00000554971 ZNF436Q9C0F3 470 aaPredicted RBP15.29■□□□□ 0.04
SHOX-204ENST00000554971 NOX3Q9HBY0 568 aa15.29■□□□□ 0.04
SHOX-204ENST00000554971 DLL4Q9NR61 685 aa15.29■□□□□ 0.04
SHOX-204ENST00000554971 B3GNT2Q9NY97 397 aa15.29■□□□□ 0.04
SHOX-204ENST00000554971 DHDHQ9UQ10 334 aa15.29■□□□□ 0.04
SHOX-204ENST00000554971 DOPEY2Q9Y3R5 2298 aa15.28■□□□□ 0.04
SHOX-204ENST00000554971 TRGV8A0A0C4DH27 118 aa15.28■□□□□ 0.04
SHOX-204ENST00000554971 GGT3PA6NGU5 568 aa15.28■□□□□ 0.04
SHOX-204ENST00000554971 SMLR1H3BR10 107 aa15.28■□□□□ 0.04
SHOX-204ENST00000554971 WDR1O75083 606 aa15.28■□□□□ 0.04
SHOX-204ENST00000554971 ZNF823P16415 610 aa15.28■□□□□ 0.04
SHOX-204ENST00000554971 KLK2P20151 261 aa15.28■□□□□ 0.04
SHOX-204ENST00000554971 MYBPHQ13203 477 aa15.28■□□□□ 0.04
SHOX-204ENST00000554971 EIF2B1Q14232 305 aaKnown RBP15.28■□□□□ 0.04
SHOX-204ENST00000554971 C6orf183Q5T699 404 aa15.28■□□□□ 0.04
SHOX-204ENST00000554971 ZNF704Q6ZNC4 412 aaPredicted RBP15.28■□□□□ 0.04
SHOX-204ENST00000554971 SLC25A43Q8WUT9 341 aaPredicted RBP15.28■□□□□ 0.04
SHOX-204ENST00000554971 OR5B2Q96R09 309 aa15.28■□□□□ 0.04
SHOX-204ENST00000554971 B3GALT5Q9Y2C3 310 aa15.28■□□□□ 0.04
SHOX-204ENST00000554971 R4GMQ9 66 aa15.28■□□□□ 0.04
SHOX-204ENST00000554971 FIGNL2A6NMB9 653 aa15.27■□□□□ 0.04
SHOX-204ENST00000554971 MS4A18H0YCH9 400 aa15.27■□□□□ 0.04
SHOX-204ENST00000554971 CTAG2O75638 210 aa15.27■□□□□ 0.04
SHOX-204ENST00000554971 CXCL3P19876 107 aa15.27■□□□□ 0.04
SHOX-204ENST00000554971 HTR2BP41595 481 aa15.27■□□□□ 0.04
SHOX-204ENST00000554971 EIF1AXP47813 144 aaKnown RBP15.27■□□□□ 0.04
SHOX-204ENST00000554971 MS4A18Q3C1V0 323 aa15.27■□□□□ 0.04
SHOX-204ENST00000554971 ZBTB37Q5TC79 503 aa15.27■□□□□ 0.04
SHOX-204ENST00000554971 THOC7Q6I9Y2 204 aaKnown RBP15.27■□□□□ 0.04
SHOX-204ENST00000554971 MEIOBQ8N635 442 aa15.27■□□□□ 0.04
SHOX-204ENST00000554971 OR10AC1Q8NH08 325 aa15.27■□□□□ 0.04
SHOX-204ENST00000554971 OR2V1Q8NHB1 315 aa15.27■□□□□ 0.04
SHOX-204ENST00000554971 ASB10Q8WXI3 467 aa15.27■□□□□ 0.04
SHOX-204ENST00000554971 PTX4Q96A99 478 aa15.27■□□□□ 0.04
SHOX-204ENST00000554971 DACT3Q96B18 629 aaPredicted RBP15.27■□□□□ 0.04
SHOX-204ENST00000554971 FAM3DQ96BQ1 224 aa15.27■□□□□ 0.04
SHOX-204ENST00000554971 SERINC1Q9NRX5 453 aa15.27■□□□□ 0.04
SHOX-204ENST00000554971 CLCF1Q9UBD9 225 aa15.27■□□□□ 0.04
SHOX-204ENST00000554971 HHLA2Q9UM44 414 aa15.27■□□□□ 0.04
SHOX-204ENST00000554971 AHRRA9YTQ3 701 aa15.27■□□□□ 0.03
SHOX-204ENST00000554971 CXCL13O43927 109 aa15.27■□□□□ 0.03
SHOX-204ENST00000554971 TOXO94900 526 aa15.27■□□□□ 0.03
SHOX-204ENST00000554971 PLGP00747 810 aaPredicted RBP15.27■□□□□ 0.03
SHOX-204ENST00000554971 ACHEP22303 614 aa15.27■□□□□ 0.03
SHOX-204ENST00000554971 DNASE1P24855 282 aa15.27■□□□□ 0.03
SHOX-204ENST00000554971 FKBP2P26885 142 aaKnown RBP15.27■□□□□ 0.03
SHOX-204ENST00000554971 DCTDP32321 178 aa15.27■□□□□ 0.03
SHOX-204ENST00000554971 PER3P56645 1201 aa15.27■□□□□ 0.03
SHOX-204ENST00000554971 MTFR2Q6P444 385 aa15.27■□□□□ 0.03
SHOX-204ENST00000554971 SLC26A10Q8NG04 563 aa15.27■□□□□ 0.03
SHOX-204ENST00000554971 OR51A4Q8NGJ6 313 aa15.27■□□□□ 0.03
SHOX-204ENST00000554971 ASB5Q8WWX0 329 aa15.27■□□□□ 0.03
SHOX-204ENST00000554971 FOXRED1Q96CU9 486 aaPredicted RBP15.27■□□□□ 0.03
SHOX-204ENST00000554971 DMRTA2Q96SC8 542 aa15.27■□□□□ 0.03
SHOX-204ENST00000554971 SLCO5A1Q9H2Y9 848 aa15.27■□□□□ 0.03
SHOX-204ENST00000554971 CHST11Q9NPF2 352 aa15.27■□□□□ 0.03
SHOX-204ENST00000554971 ZNF107Q9UII5 783 aaPredicted RBP15.27■□□□□ 0.03
SHOX-204ENST00000554971 ELF5Q9UKW6 265 aaPredicted RBP15.27■□□□□ 0.03
SHOX-204ENST00000554971 SRSF10O75494 262 aaKnown RBP15.26■□□□□ 0.03
SHOX-204ENST00000554971 GABRA1P14867 456 aa15.26■□□□□ 0.03
SHOX-204ENST00000554971 IGFBP3P17936 291 aaPredicted RBP15.26■□□□□ 0.03
SHOX-204ENST00000554971 RBMS2Q15434 407 aaKnown RBP15.26■□□□□ 0.03
SHOX-204ENST00000554971 TMEM244Q5VVB8 128 aa15.26■□□□□ 0.03
SHOX-204ENST00000554971 TMEM225Q6GV28 225 aa15.26■□□□□ 0.03
SHOX-204ENST00000554971 TMPPEQ6ZT21 453 aa15.26■□□□□ 0.03
SHOX-204ENST00000554971 SLC35D2Q76EJ3 337 aa15.26■□□□□ 0.03
SHOX-204ENST00000554971 FJX1Q86VR8 437 aa15.26■□□□□ 0.03
SHOX-204ENST00000554971 ADPRHL1Q8NDY3 354 aa15.26■□□□□ 0.03
SHOX-204ENST00000554971 DNAAF1Q8NEP3 725 aa15.26■□□□□ 0.03
SHOX-204ENST00000554971 FNDC9Q8TBE3 224 aa15.26■□□□□ 0.03
SHOX-204ENST00000554971 UCN2Q96RP3 112 aa15.26■□□□□ 0.03
SHOX-204ENST00000554971 KCNK17Q96T54 332 aa15.26■□□□□ 0.03
SHOX-204ENST00000554971 SCPEP1Q9HB40 452 aa15.26■□□□□ 0.03
SHOX-204ENST00000554971 NKIRAS2Q9NYR9 191 aa15.26■□□□□ 0.03
SHOX-204ENST00000554971 MEMO1Q9Y316 297 aa15.26■□□□□ 0.03
SHOX-204ENST00000554971 LRP12Q9Y561 859 aa15.26■□□□□ 0.03
SHOX-204ENST00000554971 ICE1Q9Y2F5 2266 aa15.26■□□□□ 0.03
SHOX-204ENST00000554971 GJE1A6NN92 205 aa15.25■□□□□ 0.03
SHOX-204ENST00000554971 CREBL2O60519 120 aaPredicted RBP15.25■□□□□ 0.03
SHOX-204ENST00000554971 GPANK1O95872 356 aa15.25■□□□□ 0.03
SHOX-204ENST00000554971 HPXP02790 462 aa15.25■□□□□ 0.03
SHOX-204ENST00000554971 RPS27P42677 84 aaKnown RBP15.25■□□□□ 0.03
SHOX-204ENST00000554971 POU3F4P49335 361 aa15.25■□□□□ 0.03
SHOX-204ENST00000554971 SRSF1Q07955 248 aaKnown RBP eCLIP15.25■□□□□ 0.03
SHOX-204ENST00000554971 C2orf76Q3KRA6 126 aa15.25■□□□□ 0.03
SHOX-204ENST00000554971 C1orf185Q5T7R7 199 aa15.25■□□□□ 0.03
SHOX-204ENST00000554971 OR51D1Q8NGF3 324 aa15.25■□□□□ 0.03
SHOX-204ENST00000554971 OR6M1Q8NGM8 313 aa15.25■□□□□ 0.03
SHOX-204ENST00000554971 ASB13Q8WXK3 278 aa15.25■□□□□ 0.03
SHOX-204ENST00000554971 SORCS2Q96PQ0 1159 aa15.25■□□□□ 0.03
SHOX-204ENST00000554971 TRIB1Q96RU8 372 aa15.25■□□□□ 0.03
SHOX-204ENST00000554971 OR10A4Q9H209 315 aa15.25■□□□□ 0.03
SHOX-204ENST00000554971 ERRFI1Q9UJM3 462 aaPredicted RBP15.25■□□□□ 0.03
SHOX-204ENST00000554971 COA3Q9Y2R0 106 aaPredicted RBP15.25■□□□□ 0.03
SHOX-204ENST00000554971 HDGFL3Q9Y3E1 203 aa15.25■□□□□ 0.03
SHOX-204ENST00000554971 A0A1W2PNV4 684 aa15.25■□□□□ 0.03
SHOX-204ENST00000554971 CIB4A0PJX0 185 aa15.25■□□□□ 0.03
SHOX-204ENST00000554971 ZNF814B7Z6K7 855 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms