RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 PTP4A1Q93096 173 aa11.1□□□□□ -0.63
SHMT2-211ENST00000554310 HAVCR1Q96D42 359 aa11.1□□□□□ -0.63
SHMT2-211ENST00000554310 CMBLQ96DG6 245 aa11.1□□□□□ -0.63
SHMT2-211ENST00000554310 YIPF6Q96EC8 236 aa11.1□□□□□ -0.63
SHMT2-211ENST00000554310 C1orf159Q96HA4 380 aa11.1□□□□□ -0.63
SHMT2-211ENST00000554310 MAP6Q96JE9 813 aa11.1□□□□□ -0.63
SHMT2-211ENST00000554310 Q96MT0 163 aa11.1□□□□□ -0.63
SHMT2-211ENST00000554310 FUNDC2Q9BWH2 189 aa11.1□□□□□ -0.63
SHMT2-211ENST00000554310 C1QTNF5Q9BXJ0 243 aa11.1□□□□□ -0.63
SHMT2-211ENST00000554310 NAA50Q9GZZ1 169 aaKnown RBP11.1□□□□□ -0.63
SHMT2-211ENST00000554310 MSL2Q9HCI7 577 aa11.1□□□□□ -0.63
SHMT2-211ENST00000554310 DDX28Q9NUL7 540 aaKnown RBP11.1□□□□□ -0.63
SHMT2-211ENST00000554310 ENPP5Q9UJA9 477 aa11.1□□□□□ -0.63
SHMT2-211ENST00000554310 TVP23AA6NH52 213 aa11.09□□□□□ -0.63
SHMT2-211ENST00000554310 LMX1BO60663 402 aa11.09□□□□□ -0.63
SHMT2-211ENST00000554310 GABARAPO95166 117 aa11.09□□□□□ -0.63
SHMT2-211ENST00000554310 FADS2O95864 444 aaKnown RBP11.09□□□□□ -0.63
SHMT2-211ENST00000554310 ACSM4P0C7M7 580 aa11.09□□□□□ -0.63
SHMT2-211ENST00000554310 PAICSP22234 425 aaKnown RBP11.09□□□□□ -0.63
SHMT2-211ENST00000554310 IL2RGP31785 369 aa11.09□□□□□ -0.63
SHMT2-211ENST00000554310 MAP2K4P45985 399 aa11.09□□□□□ -0.63
SHMT2-211ENST00000554310 ENTPD1P49961 510 aa11.09□□□□□ -0.63
SHMT2-211ENST00000554310 TNFAIP6P98066 277 aaPredicted RBP11.09□□□□□ -0.63
SHMT2-211ENST00000554310 CDK5Q00535 292 aa11.09□□□□□ -0.63
SHMT2-211ENST00000554310 SLC3A1Q07837 685 aa11.09□□□□□ -0.63
SHMT2-211ENST00000554310 IRF3Q14653 427 aa11.09□□□□□ -0.63
SHMT2-211ENST00000554310 OCLNQ16625 522 aa11.09□□□□□ -0.63
SHMT2-211ENST00000554310 PCK2Q16822 640 aa11.09□□□□□ -0.63
SHMT2-211ENST00000554310 TEX30Q5JUR7 227 aa11.09□□□□□ -0.63
SHMT2-211ENST00000554310 SLC25A30Q5SVS4 291 aa11.09□□□□□ -0.63
SHMT2-211ENST00000554310 SLC16A12Q6ZSM3 486 aa11.09□□□□□ -0.63
SHMT2-211ENST00000554310 IQCF1Q8N6M8 205 aa11.09□□□□□ -0.63
SHMT2-211ENST00000554310 LINC01356Q8N9X3 169 aa11.09□□□□□ -0.63
SHMT2-211ENST00000554310 OR51L1Q8NGJ5 315 aa11.09□□□□□ -0.63
SHMT2-211ENST00000554310 OR8J1Q8NGP2 316 aa11.09□□□□□ -0.63
SHMT2-211ENST00000554310 CLDND2Q8NHS1 167 aa11.09□□□□□ -0.63
SHMT2-211ENST00000554310 ZNRF4Q8WWF5 429 aa11.09□□□□□ -0.63
SHMT2-211ENST00000554310 SPTSSAQ969W0 71 aa11.09□□□□□ -0.63
SHMT2-211ENST00000554310 TIMD4Q96H15 378 aa11.09□□□□□ -0.63
SHMT2-211ENST00000554310 PTTG3PQ9NZH4 202 aa11.09□□□□□ -0.63
SHMT2-211ENST00000554310 WARS2Q9UGM6 360 aaKnown RBP11.09□□□□□ -0.63
SHMT2-211ENST00000554310 MXRA5Q9NR99 2828 aa11.08□□□□□ -0.63
SHMT2-211ENST00000554310 COL6A5A8TX70 2615 aa11.08□□□□□ -0.64
SHMT2-211ENST00000554310 M0R135 149 aa11.08□□□□□ -0.64
SHMT2-211ENST00000554310 SURF4O15260 269 aa11.08□□□□□ -0.64
SHMT2-211ENST00000554310 TGFAP01135 160 aa11.08□□□□□ -0.64
SHMT2-211ENST00000554310 GYPBP06028 91 aa11.08□□□□□ -0.64
SHMT2-211ENST00000554310 SPARCP09486 303 aa11.08□□□□□ -0.64
SHMT2-211ENST00000554310 SELEP16581 610 aa11.08□□□□□ -0.64
SHMT2-211ENST00000554310 HNF1AP20823 631 aa11.08□□□□□ -0.64
SHMT2-211ENST00000554310 OTX1P32242 354 aaPredicted RBP11.08□□□□□ -0.64
SHMT2-211ENST00000554310 SLC15A1P46059 708 aa11.08□□□□□ -0.64
SHMT2-211ENST00000554310 TPTEP56180 551 aa11.08□□□□□ -0.64
SHMT2-211ENST00000554310 MALLQ13021 153 aa11.08□□□□□ -0.64
SHMT2-211ENST00000554310 RSPO1Q2MKA7 263 aaPredicted RBP11.08□□□□□ -0.64
SHMT2-211ENST00000554310 LINC01590Q5TEZ4 76 aa11.08□□□□□ -0.64
SHMT2-211ENST00000554310 MEDAGQ5VYS4 303 aa11.08□□□□□ -0.64
SHMT2-211ENST00000554310 LYPD4Q6UWN0 246 aa11.08□□□□□ -0.64
SHMT2-211ENST00000554310 PRIMA1Q86XR5 153 aa11.08□□□□□ -0.64
SHMT2-211ENST00000554310 STX19Q8N4C7 294 aa11.08□□□□□ -0.64
SHMT2-211ENST00000554310 OR10S1Q8NGN2 331 aa11.08□□□□□ -0.64
SHMT2-211ENST00000554310 OR6K6Q8NGW6 343 aa11.08□□□□□ -0.64
SHMT2-211ENST00000554310 ZNF799Q96GE5 643 aa11.08□□□□□ -0.64
SHMT2-211ENST00000554310 SOX7Q9BT81 388 aa11.08□□□□□ -0.64
SHMT2-211ENST00000554310 HCAR1Q9BXC0 346 aa11.08□□□□□ -0.64
SHMT2-211ENST00000554310 CDCA4Q9BXL8 241 aa11.08□□□□□ -0.64
SHMT2-211ENST00000554310 TEX12Q9BXU0 123 aa11.08□□□□□ -0.64
SHMT2-211ENST00000554310 SHARPINQ9H0F6 387 aa11.08□□□□□ -0.64
SHMT2-211ENST00000554310 WDR76Q9H967 626 aa11.08□□□□□ -0.64
SHMT2-211ENST00000554310 FAM183AA6NL82 134 aa11.07□□□□□ -0.64
SHMT2-211ENST00000554310 B4DSR2 109 aa11.07□□□□□ -0.64
SHMT2-211ENST00000554310 F5H5K5 113 aa11.07□□□□□ -0.64
SHMT2-211ENST00000554310 LCATP04180 440 aa11.07□□□□□ -0.64
SHMT2-211ENST00000554310 HMGN1P05114 100 aa11.07□□□□□ -0.64
SHMT2-211ENST00000554310 FAM157CP0CG43 387 aa11.07□□□□□ -0.64
SHMT2-211ENST00000554310 CLUP10909 449 aa11.07□□□□□ -0.64
SHMT2-211ENST00000554310 TNFRSF1AP19438 455 aa11.07□□□□□ -0.64
SHMT2-211ENST00000554310 RPS27P42677 84 aaKnown RBP11.07□□□□□ -0.64
SHMT2-211ENST00000554310 EFNB1P98172 346 aa11.07□□□□□ -0.64
SHMT2-211ENST00000554310 GINS1Q14691 196 aa11.07□□□□□ -0.64
SHMT2-211ENST00000554310 HLXQ14774 488 aaPredicted RBP11.07□□□□□ -0.64
SHMT2-211ENST00000554310 DRAM2Q6UX65 266 aa11.07□□□□□ -0.64
SHMT2-211ENST00000554310 Q6ZR03 302 aa11.07□□□□□ -0.64
SHMT2-211ENST00000554310 DCXRQ7Z4W1 244 aa11.07□□□□□ -0.64
SHMT2-211ENST00000554310 ZNF511Q8NB15 262 aa11.07□□□□□ -0.64
SHMT2-211ENST00000554310 OR2Z1Q8NG97 314 aa11.07□□□□□ -0.64
SHMT2-211ENST00000554310 RAB1CQ92928 201 aa11.07□□□□□ -0.64
SHMT2-211ENST00000554310 SLAMF6Q96DU3 332 aa11.07□□□□□ -0.64
SHMT2-211ENST00000554310 INTS14Q96SY0 518 aa11.07□□□□□ -0.64
SHMT2-211ENST00000554310 BEX2Q9BXY8 128 aa11.07□□□□□ -0.64
SHMT2-211ENST00000554310 PRRG3Q9BZD7 231 aa11.07□□□□□ -0.64
SHMT2-211ENST00000554310 NARFLQ9H6Q4 476 aa11.07□□□□□ -0.64
SHMT2-211ENST00000554310 RPL36Q9Y3U8 105 aaKnown RBP11.07□□□□□ -0.64
SHMT2-211ENST00000554310 WIPI2Q9Y4P8 454 aa11.07□□□□□ -0.64
SHMT2-211ENST00000554310 CACNG2Q9Y698 323 aa11.07□□□□□ -0.64
SHMT2-211ENST00000554310 DYSFO75923 2080 aa11.06□□□□□ -0.64
SHMT2-211ENST00000554310 IQCF6A8MYZ5 107 aa11.06□□□□□ -0.64
SHMT2-211ENST00000554310 ZNF878C9JN71 531 aa11.06□□□□□ -0.64
SHMT2-211ENST00000554310 PRR23D1E9PI22 279 aaPredicted RBP11.06□□□□□ -0.64
SHMT2-211ENST00000554310 M0R129 80 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms