RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 LRRN1Q6UXK5 716 aa4.36□□□□□ -1.71
VTI1B-202ENST00000553619 SEM1Q6ZVN7 128 aa4.36□□□□□ -1.71
VTI1B-202ENST00000553619 USP43Q70EL4 1123 aa4.36□□□□□ -1.71
VTI1B-202ENST00000553619 BHLHA15Q7RTS1 189 aaPredicted RBP4.36□□□□□ -1.71
VTI1B-202ENST00000553619 SSX6Q7RTT6 188 aa4.36□□□□□ -1.71
VTI1B-202ENST00000553619 TPRA1Q86W33 373 aa4.36□□□□□ -1.71
VTI1B-202ENST00000553619 WDFY1Q8IWB7 410 aa4.36□□□□□ -1.71
VTI1B-202ENST00000553619 ELMOD2Q8IZ81 293 aa4.36□□□□□ -1.71
VTI1B-202ENST00000553619 ZNF485Q8NCK3 441 aa4.36□□□□□ -1.71
VTI1B-202ENST00000553619 OR52H1Q8NGJ2 320 aa4.36□□□□□ -1.71
VTI1B-202ENST00000553619 OR2G2Q8NGZ5 317 aa4.36□□□□□ -1.71
VTI1B-202ENST00000553619 GPR148Q8TDV2 347 aa4.36□□□□□ -1.71
VTI1B-202ENST00000553619 SMAP2Q8WU79 429 aaPredicted RBP4.36□□□□□ -1.71
VTI1B-202ENST00000553619 HSD17B8Q92506 261 aa4.36□□□□□ -1.71
VTI1B-202ENST00000553619 SMIM19Q96E16 107 aa4.36□□□□□ -1.71
VTI1B-202ENST00000553619 FBXO17Q96EF6 278 aa4.36□□□□□ -1.71
VTI1B-202ENST00000553619 PGAM5Q96HS1 289 aa4.36□□□□□ -1.71
VTI1B-202ENST00000553619 KCTD7Q96MP8 289 aa4.36□□□□□ -1.71
VTI1B-202ENST00000553619 OPALINQ96PE5 141 aa4.36□□□□□ -1.71
VTI1B-202ENST00000553619 DMRTA2Q96SC8 542 aa4.36□□□□□ -1.71
VTI1B-202ENST00000553619 OR2H1Q9GZK4 316 aa4.36□□□□□ -1.71
VTI1B-202ENST00000553619 SLITRK2Q9H156 845 aa4.36□□□□□ -1.71
VTI1B-202ENST00000553619 RGCCQ9H4X1 137 aa4.36□□□□□ -1.71
VTI1B-202ENST00000553619 EXOSC4Q9NPD3 245 aaKnown RBP4.36□□□□□ -1.71
VTI1B-202ENST00000553619 SLC17A5Q9NRA2 495 aa4.36□□□□□ -1.71
VTI1B-202ENST00000553619 DDX28Q9NUL7 540 aaKnown RBP4.36□□□□□ -1.71
VTI1B-202ENST00000553619 NDUFB11Q9NX14 153 aa4.36□□□□□ -1.71
VTI1B-202ENST00000553619 MRM2Q9UI43 246 aaKnown RBP4.36□□□□□ -1.71
VTI1B-202ENST00000553619 ENPP5Q9UJA9 477 aa4.36□□□□□ -1.71
VTI1B-202ENST00000553619 SH3BGRL2Q9UJC5 107 aa4.36□□□□□ -1.71
VTI1B-202ENST00000553619 ERRFI1Q9UJM3 462 aaPredicted RBP4.36□□□□□ -1.71
VTI1B-202ENST00000553619 TINAGQ9UJW2 476 aa4.36□□□□□ -1.71
VTI1B-202ENST00000553619 OR52A1Q9UKL2 312 aa4.36□□□□□ -1.71
VTI1B-202ENST00000553619 GTF2A1LQ9UNN4 478 aa4.36□□□□□ -1.71
VTI1B-202ENST00000553619 LRP12Q9Y561 859 aa4.36□□□□□ -1.71
VTI1B-202ENST00000553619 LHFPL6Q9Y693 200 aa4.36□□□□□ -1.71
VTI1B-202ENST00000553619 CEPT1Q9Y6K0 416 aa4.36□□□□□ -1.71
VTI1B-202ENST00000553619 HEATR1Q9H583 2144 aaKnown RBP4.36□□□□□ -1.71
VTI1B-202ENST00000553619 A0A1B0GVI7 797 aa4.35□□□□□ -1.71
VTI1B-202ENST00000553619 OR5H1A6NKK0 313 aa4.35□□□□□ -1.71
VTI1B-202ENST00000553619 ZNF879B4DU55 563 aa4.35□□□□□ -1.71
VTI1B-202ENST00000553619 EEF1E1-BLOC1S5C9J1V9 151 aa4.35□□□□□ -1.71
VTI1B-202ENST00000553619 F5H5K5 113 aa4.35□□□□□ -1.71
VTI1B-202ENST00000553619 C16orf97H3BN30 126 aa4.35□□□□□ -1.71
VTI1B-202ENST00000553619 M0R135 149 aa4.35□□□□□ -1.71
VTI1B-202ENST00000553619 PSMD9O00233 223 aa4.35□□□□□ -1.71
VTI1B-202ENST00000553619 EEF1E1O43324 174 aaKnown RBP4.35□□□□□ -1.71
VTI1B-202ENST00000553619 XRCC2O43543 280 aa4.35□□□□□ -1.71
VTI1B-202ENST00000553619 SYNGR3O43761 229 aa4.35□□□□□ -1.71
VTI1B-202ENST00000553619 TMEM127O75204 238 aa4.35□□□□□ -1.71
VTI1B-202ENST00000553619 RAD51DO75771 328 aa4.35□□□□□ -1.71
VTI1B-202ENST00000553619 LYZL6O75951 148 aa4.35□□□□□ -1.71
VTI1B-202ENST00000553619 MPIG6BO95866 241 aa4.35□□□□□ -1.71
VTI1B-202ENST00000553619 ABHD16AO95870 558 aa4.35□□□□□ -1.71
VTI1B-202ENST00000553619 LCATP04180 440 aa4.35□□□□□ -1.71
VTI1B-202ENST00000553619 ISG15P05161 165 aa4.35□□□□□ -1.71
VTI1B-202ENST00000553619 ANXA2P07355 339 aaKnown RBP4.35□□□□□ -1.71
VTI1B-202ENST00000553619 ADRA2AP08913 450 aa4.35□□□□□ -1.71
VTI1B-202ENST00000553619 MMP7P09237 267 aaPredicted RBP4.35□□□□□ -1.71
VTI1B-202ENST00000553619 UBCP0CG48 685 aaKnown RBP4.35□□□□□ -1.71
VTI1B-202ENST00000553619 COX5AP20674 150 aa4.35□□□□□ -1.71
VTI1B-202ENST00000553619 AGAP20933 346 aa4.35□□□□□ -1.71
VTI1B-202ENST00000553619 ACHEP22303 614 aa4.35□□□□□ -1.71
VTI1B-202ENST00000553619 MYL9P24844 172 aa4.35□□□□□ -1.71
VTI1B-202ENST00000553619 STOMP27105 288 aa4.35□□□□□ -1.71
VTI1B-202ENST00000553619 OTX1P32242 354 aaPredicted RBP4.35□□□□□ -1.71
VTI1B-202ENST00000553619 SOX6P35712 828 aa4.35□□□□□ -1.71
VTI1B-202ENST00000553619 CD79BP40259 229 aa4.35□□□□□ -1.71
VTI1B-202ENST00000553619 PSMB10P40306 273 aa4.35□□□□□ -1.71
VTI1B-202ENST00000553619 RPS27P42677 84 aaKnown RBP4.35□□□□□ -1.71
VTI1B-202ENST00000553619 RAD52P43351 418 aa4.35□□□□□ -1.71
VTI1B-202ENST00000553619 HTR5AP47898 357 aa4.35□□□□□ -1.71
VTI1B-202ENST00000553619 SLC6A9P48067 706 aa4.35□□□□□ -1.71
VTI1B-202ENST00000553619 PRKXP51817 358 aa4.35□□□□□ -1.71
VTI1B-202ENST00000553619 SLC3A1Q07837 685 aa4.35□□□□□ -1.71
VTI1B-202ENST00000553619 FHL2Q14192 279 aa4.35□□□□□ -1.71
VTI1B-202ENST00000553619 ESPL1Q14674 2120 aa4.35□□□□□ -1.71
VTI1B-202ENST00000553619 DGUOKQ16854 277 aa4.35□□□□□ -1.71
VTI1B-202ENST00000553619 TBC1D28Q2M2D7 210 aa4.35□□□□□ -1.71
VTI1B-202ENST00000553619 Q499Y3 187 aa4.35□□□□□ -1.71
VTI1B-202ENST00000553619 ACSM3Q53FZ2 586 aa4.35□□□□□ -1.71
VTI1B-202ENST00000553619 PRR30Q53SZ7 412 aaPredicted RBP4.35□□□□□ -1.71
VTI1B-202ENST00000553619 PABPC1L2AQ5JQF8 200 aa4.35□□□□□ -1.71
VTI1B-202ENST00000553619 BCL2L15Q5TBC7 163 aa4.35□□□□□ -1.71
VTI1B-202ENST00000553619 ZNF774Q6NX45 483 aa4.35□□□□□ -1.71
VTI1B-202ENST00000553619 XKRXQ6PP77 449 aa4.35□□□□□ -1.71
VTI1B-202ENST00000553619 PCSK4Q6UW60 755 aa4.35□□□□□ -1.71
VTI1B-202ENST00000553619 UNQ9370/PRO34162Q6UXP9 181 aa4.35□□□□□ -1.71
VTI1B-202ENST00000553619 C3P1Q6ZMU1 363 aa4.35□□□□□ -1.71
VTI1B-202ENST00000553619 LINGO2Q7L985 606 aa4.35□□□□□ -1.71
VTI1B-202ENST00000553619 CEACAM19Q7Z692 300 aa4.35□□□□□ -1.71
VTI1B-202ENST00000553619 CXorf67Q86X51 503 aaPredicted RBP4.35□□□□□ -1.71
VTI1B-202ENST00000553619 CATSPERDQ86XM0 798 aa4.35□□□□□ -1.71
VTI1B-202ENST00000553619 CROCCP3Q8IVE0 287 aa4.35□□□□□ -1.71
VTI1B-202ENST00000553619 GABRG1Q8N1C3 465 aa4.35□□□□□ -1.71
VTI1B-202ENST00000553619 ZNF808Q8N4W9 903 aaPredicted RBP4.35□□□□□ -1.71
VTI1B-202ENST00000553619 KBTBD8Q8NFY9 601 aa4.35□□□□□ -1.71
VTI1B-202ENST00000553619 LILRB4Q8NHJ6 448 aa4.35□□□□□ -1.71
VTI1B-202ENST00000553619 AKAP1Q92667 903 aaKnown RBP eCLIP4.35□□□□□ -1.71
VTI1B-202ENST00000553619 GHSRQ92847 366 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 142.8 ms