RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 GABRB1P18505 474 aa19.34■□□□□ 0.69
TDP1-206ENST00000553569 MTNR1AP48039 350 aa19.34■□□□□ 0.69
TDP1-206ENST00000553569 HFEQ30201 348 aa19.34■□□□□ 0.69
TDP1-206ENST00000553569 SLC25A30Q5SVS4 291 aa19.34■□□□□ 0.69
TDP1-206ENST00000553569 OGFRL1Q5TC84 451 aaPredicted RBP19.34■□□□□ 0.69
TDP1-206ENST00000553569 OR8B12Q8NGG6 310 aa19.34■□□□□ 0.69
TDP1-206ENST00000553569 CCL17Q92583 94 aa19.34■□□□□ 0.69
TDP1-206ENST00000553569 SPSB4Q96A44 273 aa19.34■□□□□ 0.69
TDP1-206ENST00000553569 RNFT2Q96EX2 444 aa19.34■□□□□ 0.69
TDP1-206ENST00000553569 NARFLQ9H6Q4 476 aa19.34■□□□□ 0.69
TDP1-206ENST00000553569 NKX1-2Q9UD57 310 aaPredicted RBP19.34■□□□□ 0.69
TDP1-206ENST00000553569 TMEM269A0A1B0GVZ9 245 aa19.33■□□□□ 0.68
TDP1-206ENST00000553569 A0A1W2PQL4 384 aaPredicted RBP19.33■□□□□ 0.68
TDP1-206ENST00000553569 LRP5LA4QPB2 252 aa19.33■□□□□ 0.68
TDP1-206ENST00000553569 F5H5P2 479 aa19.33■□□□□ 0.68
TDP1-206ENST00000553569 CASQ2O14958 399 aaPredicted RBP19.33■□□□□ 0.68
TDP1-206ENST00000553569 MPZL2O60487 215 aa19.33■□□□□ 0.68
TDP1-206ENST00000553569 ZNF254O75437 659 aa19.33■□□□□ 0.68
TDP1-206ENST00000553569 OR2T7P0C7T2 308 aa19.33■□□□□ 0.68
TDP1-206ENST00000553569 ZNF829Q3KNS6 432 aaPredicted RBP19.33■□□□□ 0.68
TDP1-206ENST00000553569 PLEKHG7Q6ZR37 379 aa19.33■□□□□ 0.68
TDP1-206ENST00000553569 OR2T27Q8NH04 317 aa19.33■□□□□ 0.68
TDP1-206ENST00000553569 FAM206AQ9NX38 181 aa19.33■□□□□ 0.68
TDP1-206ENST00000553569 IL19Q9UHD0 177 aa19.33■□□□□ 0.68
TDP1-206ENST00000553569 GTF2A1LQ9UNN4 478 aa19.33■□□□□ 0.68
TDP1-206ENST00000553569 IGHV3-64DA0A0J9YX35 117 aa19.32■□□□□ 0.68
TDP1-206ENST00000553569 hCG_38984A0A1B0GV85 526 aa19.32■□□□□ 0.68
TDP1-206ENST00000553569 SNTNA6NMZ2 147 aa19.32■□□□□ 0.68
TDP1-206ENST00000553569 CLDN25C9JDP6 229 aa19.32■□□□□ 0.68
TDP1-206ENST00000553569 CLIC3O95833 236 aa19.32■□□□□ 0.68
TDP1-206ENST00000553569 HEXAP06865 529 aa19.32■□□□□ 0.68
TDP1-206ENST00000553569 TNFRSF1AP19438 455 aa19.32■□□□□ 0.68
TDP1-206ENST00000553569 CA6P23280 308 aa19.32■□□□□ 0.68
TDP1-206ENST00000553569 CFL1P23528 166 aaKnown RBP19.32■□□□□ 0.68
TDP1-206ENST00000553569 RBMXP38159 391 aaKnown RBP19.32■□□□□ 0.68
TDP1-206ENST00000553569 TMEM33P57088 247 aa19.32■□□□□ 0.68
TDP1-206ENST00000553569 FAM3AP98173 230 aa19.32■□□□□ 0.68
TDP1-206ENST00000553569 IL5RAQ01344 420 aa19.32■□□□□ 0.68
TDP1-206ENST00000553569 EGR3Q06889 387 aa19.32■□□□□ 0.68
TDP1-206ENST00000553569 MFGE8Q08431 387 aaPredicted RBP19.32■□□□□ 0.68
TDP1-206ENST00000553569 OR8G1Q15617 311 aa19.32■□□□□ 0.68
TDP1-206ENST00000553569 TMEM249Q2WGJ8 235 aa19.32■□□□□ 0.68
TDP1-206ENST00000553569 AVPI1Q5T686 147 aa19.32■□□□□ 0.68
TDP1-206ENST00000553569 RHOXF1Q8NHV9 184 aa19.32■□□□□ 0.68
TDP1-206ENST00000553569 DVL3Q92997 716 aaPredicted RBP19.32■□□□□ 0.68
TDP1-206ENST00000553569 MEGF10Q96KG7 1140 aa19.32■□□□□ 0.68
TDP1-206ENST00000553569 ADAT1Q9BUB4 502 aaKnown RBP19.32■□□□□ 0.68
TDP1-206ENST00000553569 MRM2Q9UI43 246 aaKnown RBP19.32■□□□□ 0.68
TDP1-206ENST00000553569 DYSFO75923 2080 aa19.32■□□□□ 0.68
TDP1-206ENST00000553569 KRT8P05787 483 aa19.31■□□□□ 0.68
TDP1-206ENST00000553569 MVKQ03426 396 aa19.31■□□□□ 0.68
TDP1-206ENST00000553569 ZNF91Q05481 1191 aa19.31■□□□□ 0.68
TDP1-206ENST00000553569 KRTAP1-1Q07627 177 aa19.31■□□□□ 0.68
TDP1-206ENST00000553569 YIPF7Q8N8F6 280 aa19.31■□□□□ 0.68
TDP1-206ENST00000553569 PBOV1Q9GZY1 135 aa19.31■□□□□ 0.68
TDP1-206ENST00000553569 RGCCQ9H4X1 137 aa19.31■□□□□ 0.68
TDP1-206ENST00000553569 DCAF16Q9NXF7 216 aa19.31■□□□□ 0.68
TDP1-206ENST00000553569 YLPM1P49750 1951 aaKnown RBP19.31■□□□□ 0.68
TDP1-206ENST00000553569 LOC110117498-PIK3R3F6TDL0 507 aa19.3■□□□□ 0.68
TDP1-206ENST00000553569 H0YHG0 523 aa19.3■□□□□ 0.68
TDP1-206ENST00000553569 RPP14O95059 124 aaKnown RBP19.3■□□□□ 0.68
TDP1-206ENST00000553569 TACSTD2P09758 323 aa19.3■□□□□ 0.68
TDP1-206ENST00000553569 DCTDP32321 178 aa19.3■□□□□ 0.68
TDP1-206ENST00000553569 SRP9P49458 86 aaKnown RBP19.3■□□□□ 0.68
TDP1-206ENST00000553569 GSK3AP49840 483 aa19.3■□□□□ 0.68
TDP1-206ENST00000553569 CHN2P52757 468 aa19.3■□□□□ 0.68
TDP1-206ENST00000553569 SLC34A1Q06495 639 aa19.3■□□□□ 0.68
TDP1-206ENST00000553569 COMMD2Q86X83 199 aa19.3■□□□□ 0.68
TDP1-206ENST00000553569 DHRSXQ8N5I4 330 aa19.3■□□□□ 0.68
TDP1-206ENST00000553569 APH1BQ8WW43 257 aa19.3■□□□□ 0.68
TDP1-206ENST00000553569 LYZL4Q96KX0 146 aa19.3■□□□□ 0.68
TDP1-206ENST00000553569 Q96MT0 163 aa19.3■□□□□ 0.68
TDP1-206ENST00000553569 VCXQ9H320 206 aa19.3■□□□□ 0.68
TDP1-206ENST00000553569 AMBNQ9NP70 447 aa19.3■□□□□ 0.68
TDP1-206ENST00000553569 MRPL15Q9P015 296 aaKnown RBP19.3■□□□□ 0.68
TDP1-206ENST00000553569 PPP1R3CQ9UQK1 317 aa19.3■□□□□ 0.68
TDP1-206ENST00000553569 CSPG4Q6UVK1 2322 aa19.29■□□□□ 0.68
TDP1-206ENST00000553569 A0A1B0GWJ7 208 aa19.29■□□□□ 0.68
TDP1-206ENST00000553569 ANKRD30BLA7E2S9 258 aa19.29■□□□□ 0.68
TDP1-206ENST00000553569 PNPP00491 289 aa19.29■□□□□ 0.68
TDP1-206ENST00000553569 DBTP11182 482 aaKnown RBP19.29■□□□□ 0.68
TDP1-206ENST00000553569 DDOSTP39656 456 aa19.29■□□□□ 0.68
TDP1-206ENST00000553569 ZNF85Q03923 595 aa19.29■□□□□ 0.68
TDP1-206ENST00000553569 ZNF691Q5VV52 312 aa19.29■□□□□ 0.68
TDP1-206ENST00000553569 TTC23Q5W5X9 447 aa19.29■□□□□ 0.68
TDP1-206ENST00000553569 LGALS12Q96DT0 336 aa19.29■□□□□ 0.68
TDP1-206ENST00000553569 TIMD4Q96H15 378 aa19.29■□□□□ 0.68
TDP1-206ENST00000553569 SOX7Q9BT81 388 aa19.29■□□□□ 0.68
TDP1-206ENST00000553569 SLC22A4Q9H015 551 aa19.29■□□□□ 0.68
TDP1-206ENST00000553569 RNPEPL1Q9HAU8 725 aa19.29■□□□□ 0.68
TDP1-206ENST00000553569 NOP16Q9Y3C1 178 aaKnown RBP19.29■□□□□ 0.68
TDP1-206ENST00000553569 R4GMQ9 66 aa19.29■□□□□ 0.68
TDP1-206ENST00000553569 METTL15A6NJ78 407 aa19.28■□□□□ 0.68
TDP1-206ENST00000553569 ACOD1A6NK06 481 aa19.28■□□□□ 0.68
TDP1-206ENST00000553569 WNT9BO14905 357 aa19.28■□□□□ 0.68
TDP1-206ENST00000553569 SRSF10O75494 262 aaKnown RBP19.28■□□□□ 0.68
TDP1-206ENST00000553569 IGHV4-31P0DP07 118 aa19.28■□□□□ 0.68
TDP1-206ENST00000553569 IL2RGP31785 369 aa19.28■□□□□ 0.68
TDP1-206ENST00000553569 ACTC1P68032 377 aa19.28■□□□□ 0.68
TDP1-206ENST00000553569 ACTA1P68133 377 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms