RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 PPP1R35Q8TAP8 253 aa7.44□□□□□ -1.22
SYNE2-209ENST00000553308 SLC7A13Q8TCU3 470 aa7.44□□□□□ -1.22
SYNE2-209ENST00000553308 NPRL2Q8WTW4 380 aa7.44□□□□□ -1.22
SYNE2-209ENST00000553308 DYDC1Q8WWB3 177 aa7.44□□□□□ -1.22
SYNE2-209ENST00000553308 CFHR4Q92496 578 aa7.44□□□□□ -1.22
SYNE2-209ENST00000553308 ITPKCQ96DU7 683 aa7.44□□□□□ -1.22
SYNE2-209ENST00000553308 RSRC1Q96IZ7 334 aaKnown RBP7.44□□□□□ -1.22
SYNE2-209ENST00000553308 CCL13Q99616 98 aa7.44□□□□□ -1.22
SYNE2-209ENST00000553308 SRA1Q9HD15 236 aaKnown RBP7.44□□□□□ -1.22
SYNE2-209ENST00000553308 AURKAIP1Q9NWT8 199 aaPredicted RBP7.44□□□□□ -1.22
SYNE2-209ENST00000553308 KAAG1Q9UBP8 84 aa7.44□□□□□ -1.22
SYNE2-209ENST00000553308 TMEM5Q9Y2B1 443 aa7.44□□□□□ -1.22
SYNE2-209ENST00000553308 NOP16Q9Y3C1 178 aaKnown RBP7.44□□□□□ -1.22
SYNE2-209ENST00000553308 A0A0G2JND7 137 aa7.43□□□□□ -1.22
SYNE2-209ENST00000553308 GGT3PA6NGU5 568 aa7.43□□□□□ -1.22
SYNE2-209ENST00000553308 H3BUX3 64 aa7.43□□□□□ -1.22
SYNE2-209ENST00000553308 M0R135 149 aa7.43□□□□□ -1.22
SYNE2-209ENST00000553308 ZNF682O95780 498 aa7.43□□□□□ -1.22
SYNE2-209ENST00000553308 TXNDC12O95881 172 aa7.43□□□□□ -1.22
SYNE2-209ENST00000553308 PAHP00439 452 aa7.43□□□□□ -1.22
SYNE2-209ENST00000553308 LHBP01229 141 aa7.43□□□□□ -1.22
SYNE2-209ENST00000553308 SELLP14151 372 aa7.43□□□□□ -1.22
SYNE2-209ENST00000553308 EEF1B2P24534 225 aaKnown RBP7.43□□□□□ -1.22
SYNE2-209ENST00000553308 OMPP47874 163 aa7.43□□□□□ -1.22
SYNE2-209ENST00000553308 RPS6KA3P51812 740 aa7.43□□□□□ -1.22
SYNE2-209ENST00000553308 TPTEP56180 551 aa7.43□□□□□ -1.22
SYNE2-209ENST00000553308 GUCA2AQ02747 115 aa7.43□□□□□ -1.22
SYNE2-209ENST00000553308 ECH1Q13011 328 aa7.43□□□□□ -1.22
SYNE2-209ENST00000553308 RFX4Q33E94 735 aa7.43□□□□□ -1.22
SYNE2-209ENST00000553308 C11orf91Q3C1V1 193 aa7.43□□□□□ -1.22
SYNE2-209ENST00000553308 IFI44LQ53G44 452 aa7.43□□□□□ -1.22
SYNE2-209ENST00000553308 COQ5Q5HYK3 327 aa7.43□□□□□ -1.22
SYNE2-209ENST00000553308 WDR38Q5JTN6 314 aa7.43□□□□□ -1.22
SYNE2-209ENST00000553308 GLYATL3Q5SZD4 288 aa7.43□□□□□ -1.22
SYNE2-209ENST00000553308 DPY19L2P2Q6ZN68 376 aa7.43□□□□□ -1.22
SYNE2-209ENST00000553308 RRM2BQ7LG56 351 aa7.43□□□□□ -1.22
SYNE2-209ENST00000553308 TSEN54Q7Z6J9 526 aaKnown RBP7.43□□□□□ -1.22
SYNE2-209ENST00000553308 WDR86Q86TI4 376 aa7.43□□□□□ -1.22
SYNE2-209ENST00000553308 KLHDC1Q8N7A1 406 aa7.43□□□□□ -1.22
SYNE2-209ENST00000553308 OR56B2PQ8NGI1 322 aa7.43□□□□□ -1.22
SYNE2-209ENST00000553308 OR2AJ1Q8NGZ0 328 aa7.43□□□□□ -1.22
SYNE2-209ENST00000553308 OR5R1Q8NH85 324 aa7.43□□□□□ -1.22
SYNE2-209ENST00000553308 LRRC29Q8WV35 223 aa7.43□□□□□ -1.22
SYNE2-209ENST00000553308 C17orf50Q8WW18 174 aa7.43□□□□□ -1.22
SYNE2-209ENST00000553308 TNFRSF14Q92956 283 aa7.43□□□□□ -1.22
SYNE2-209ENST00000553308 PPP1R14AQ96A00 147 aa7.43□□□□□ -1.22
SYNE2-209ENST00000553308 SEH1LQ96EE3 360 aa7.43□□□□□ -1.22
SYNE2-209ENST00000553308 ZNF799Q96GE5 643 aa7.43□□□□□ -1.22
SYNE2-209ENST00000553308 MAP6Q96JE9 813 aa7.43□□□□□ -1.22
SYNE2-209ENST00000553308 HSH2DQ96JZ2 352 aa7.43□□□□□ -1.22
SYNE2-209ENST00000553308 ERMAPQ96PL5 475 aaPredicted RBP7.43□□□□□ -1.22
SYNE2-209ENST00000553308 NMNAT3Q96T66 252 aa7.43□□□□□ -1.22
SYNE2-209ENST00000553308 TMEM120AQ9BXJ8 343 aa7.43□□□□□ -1.22
SYNE2-209ENST00000553308 FN3KQ9H479 309 aa7.43□□□□□ -1.22
SYNE2-209ENST00000553308 CYB5R1Q9UHQ9 305 aa7.43□□□□□ -1.22
SYNE2-209ENST00000553308 B9D1Q9UPM9 204 aa7.43□□□□□ -1.22
SYNE2-209ENST00000553308 AURKCQ9UQB9 309 aa7.43□□□□□ -1.22
SYNE2-209ENST00000553308 MEIOCA2RUB1 952 aa7.42□□□□□ -1.22
SYNE2-209ENST00000553308 UNC119BA6NIH7 251 aa7.42□□□□□ -1.22
SYNE2-209ENST00000553308 BBIP1A8MTZ0 92 aa7.42□□□□□ -1.22
SYNE2-209ENST00000553308 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.42□□□□□ -1.22
SYNE2-209ENST00000553308 BHLHE40O14503 412 aa7.42□□□□□ -1.22
SYNE2-209ENST00000553308 ACOT8O14734 319 aa7.42□□□□□ -1.22
SYNE2-209ENST00000553308 NPPAP01160 153 aa7.42□□□□□ -1.22
SYNE2-209ENST00000553308 VSIG10L2P0DP72 767 aa7.42□□□□□ -1.22
SYNE2-209ENST00000553308 PSKH1P11801 424 aa7.42□□□□□ -1.22
SYNE2-209ENST00000553308 AMY2BP19961 511 aa7.42□□□□□ -1.22
SYNE2-209ENST00000553308 RPS27P42677 84 aaKnown RBP7.42□□□□□ -1.22
SYNE2-209ENST00000553308 CSNK2BP67870 215 aa7.42□□□□□ -1.22
SYNE2-209ENST00000553308 IKZF1Q13422 519 aa7.42□□□□□ -1.22
SYNE2-209ENST00000553308 SEC23BQ15437 767 aa7.42□□□□□ -1.22
SYNE2-209ENST00000553308 LY6EQ16553 131 aa7.42□□□□□ -1.22
SYNE2-209ENST00000553308 MICBQ29980 383 aa7.42□□□□□ -1.22
SYNE2-209ENST00000553308 FGD3Q5JSP0 725 aa7.42□□□□□ -1.22
SYNE2-209ENST00000553308 METTL21CQ5VZV1 264 aa7.42□□□□□ -1.22
SYNE2-209ENST00000553308 FKBP9P1Q75LS8 142 aa7.42□□□□□ -1.22
SYNE2-209ENST00000553308 C11orf53Q8IXP5 236 aa7.42□□□□□ -1.22
SYNE2-209ENST00000553308 CMTM4Q8IZR5 234 aa7.42□□□□□ -1.22
SYNE2-209ENST00000553308 OR4K13Q8NH42 304 aa7.42□□□□□ -1.22
SYNE2-209ENST00000553308 SGCDQ92629 289 aa7.42□□□□□ -1.22
SYNE2-209ENST00000553308 PHF21AQ96BD5 680 aa7.42□□□□□ -1.22
SYNE2-209ENST00000553308 DCTN5Q9BTE1 182 aa7.42□□□□□ -1.22
SYNE2-209ENST00000553308 ANKRD19PQ9H560 264 aa7.42□□□□□ -1.22
SYNE2-209ENST00000553308 RPRD1BQ9NQG5 326 aaKnown RBP7.42□□□□□ -1.22
SYNE2-209ENST00000553308 NECAP2Q9NVZ3 263 aa7.42□□□□□ -1.22
SYNE2-209ENST00000553308 MRPL22Q9NWU5 206 aaKnown RBP7.42□□□□□ -1.22
SYNE2-209ENST00000553308 CMTM6Q9NX76 183 aa7.42□□□□□ -1.22
SYNE2-209ENST00000553308 MRPL15Q9P015 296 aaKnown RBP7.42□□□□□ -1.22
SYNE2-209ENST00000553308 PRPF19Q9UMS4 504 aaKnown RBP7.42□□□□□ -1.22
SYNE2-209ENST00000553308 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.41□□□□□ -1.22
SYNE2-209ENST00000553308 TRBV4-1A0A0J9YWV2 114 aa7.41□□□□□ -1.22
SYNE2-209ENST00000553308 LOC100653049A0A140TA62 436 aa7.41□□□□□ -1.22
SYNE2-209ENST00000553308 CXCR6O00574 342 aa7.41□□□□□ -1.22
SYNE2-209ENST00000553308 EDF1O60869 148 aaKnown RBP7.41□□□□□ -1.22
SYNE2-209ENST00000553308 KRT34O76011 436 aa7.41□□□□□ -1.22
SYNE2-209ENST00000553308 RENP00797 406 aa7.41□□□□□ -1.22
SYNE2-209ENST00000553308 SERPINA1P01009 418 aa7.41□□□□□ -1.22
SYNE2-209ENST00000553308 HLA-DQA2P01906 255 aa7.41□□□□□ -1.22
SYNE2-209ENST00000553308 TFF1P04155 84 aa7.41□□□□□ -1.22
SYNE2-209ENST00000553308 H1F0P07305 194 aaKnown RBP7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms