RNA–Protein interactions for RNA: ENST00000553011.5

PTCH1-226, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-226ENST00000553011 DHRSXQ8N5I4 330 aa11.98□□□□□ -0.49
PTCH1-226ENST00000553011 OR8B12Q8NGG6 310 aa11.98□□□□□ -0.49
PTCH1-226ENST00000553011 OR56B2PQ8NGI1 322 aa11.98□□□□□ -0.49
PTCH1-226ENST00000553011 OR52H1Q8NGJ2 320 aa11.98□□□□□ -0.49
PTCH1-226ENST00000553011 OR2T27Q8NH04 317 aa11.98□□□□□ -0.49
PTCH1-226ENST00000553011 SPRYD4Q8WW59 207 aaPredicted RBP11.98□□□□□ -0.49
PTCH1-226ENST00000553011 SPSB4Q96A44 273 aa11.98□□□□□ -0.49
PTCH1-226ENST00000553011 REEP6Q96HR9 211 aa11.98□□□□□ -0.49
PTCH1-226ENST00000553011 DIRC2Q96SL1 478 aa11.98□□□□□ -0.49
PTCH1-226ENST00000553011 SLC30A2Q9BRI3 323 aa11.98□□□□□ -0.49
PTCH1-226ENST00000553011 BPESC1Q9GZL8 116 aa11.98□□□□□ -0.49
PTCH1-226ENST00000553011 AMBNQ9NP70 447 aa11.98□□□□□ -0.49
PTCH1-226ENST00000553011 ZNF275Q9NSD4 429 aaPredicted RBP11.98□□□□□ -0.49
PTCH1-226ENST00000553011 FAM206AQ9NX38 181 aa11.98□□□□□ -0.49
PTCH1-226ENST00000553011 TREM2Q9NZC2 230 aa11.98□□□□□ -0.49
PTCH1-226ENST00000553011 MRM2Q9UI43 246 aaKnown RBP11.98□□□□□ -0.49
PTCH1-226ENST00000553011 CACNG2Q9Y698 323 aa11.98□□□□□ -0.49
PTCH1-226ENST00000553011 HIVEP2P31629 2446 aa11.98□□□□□ -0.49
PTCH1-226ENST00000553011 WNK2Q9Y3S1 2297 aa11.98□□□□□ -0.49
PTCH1-226ENST00000553011 IGHV1-69-2A0A0G2JMI3 117 aa11.97□□□□□ -0.49
PTCH1-226ENST00000553011 hCG_38984A0A1B0GV85 526 aa11.97□□□□□ -0.49
PTCH1-226ENST00000553011 TMEM269A0A1B0GVZ9 245 aa11.97□□□□□ -0.49
PTCH1-226ENST00000553011 WBP4O75554 376 aaKnown RBP11.97□□□□□ -0.49
PTCH1-226ENST00000553011 PNPP00491 289 aa11.97□□□□□ -0.49
PTCH1-226ENST00000553011 HLA-DPB1P04440 258 aa11.97□□□□□ -0.49
PTCH1-226ENST00000553011 ACHEP22303 614 aa11.97□□□□□ -0.49
PTCH1-226ENST00000553011 GIFP27352 417 aa11.97□□□□□ -0.49
PTCH1-226ENST00000553011 RBMXP38159 391 aaKnown RBP11.97□□□□□ -0.49
PTCH1-226ENST00000553011 CRYBB2P43320 205 aa11.97□□□□□ -0.49
PTCH1-226ENST00000553011 NR4A2P43354 598 aa11.97□□□□□ -0.49
PTCH1-226ENST00000553011 MRPS11P82912 194 aaKnown RBP11.97□□□□□ -0.49
PTCH1-226ENST00000553011 FAM3AP98173 230 aa11.97□□□□□ -0.49
PTCH1-226ENST00000553011 IL5RAQ01344 420 aa11.97□□□□□ -0.49
PTCH1-226ENST00000553011 ZNF85Q03923 595 aa11.97□□□□□ -0.49
PTCH1-226ENST00000553011 EGR3Q06889 387 aa11.97□□□□□ -0.49
PTCH1-226ENST00000553011 SMN1Q16637 294 aaKnown RBP11.97□□□□□ -0.49
PTCH1-226ENST00000553011 TTC23Q5W5X9 447 aa11.97□□□□□ -0.49
PTCH1-226ENST00000553011 ZNF771Q7L3S4 317 aaPredicted RBP11.97□□□□□ -0.49
PTCH1-226ENST00000553011 OR13G1Q8NGZ3 307 aa11.97□□□□□ -0.49
PTCH1-226ENST00000553011 CNIH3Q8TBE1 160 aa11.97□□□□□ -0.49
PTCH1-226ENST00000553011 ITLN1Q8WWA0 313 aa11.97□□□□□ -0.49
PTCH1-226ENST00000553011 PPP1R14AQ96A00 147 aa11.97□□□□□ -0.49
PTCH1-226ENST00000553011 LGALS12Q96DT0 336 aa11.97□□□□□ -0.49
PTCH1-226ENST00000553011 Q96MT0 163 aa11.97□□□□□ -0.49
PTCH1-226ENST00000553011 SOX7Q9BT81 388 aa11.97□□□□□ -0.49
PTCH1-226ENST00000553011 ADI1Q9BV57 179 aa11.97□□□□□ -0.49
PTCH1-226ENST00000553011 EGLN1Q9GZT9 426 aa11.97□□□□□ -0.49
PTCH1-226ENST00000553011 GSX1Q9H4S2 264 aaPredicted RBP11.97□□□□□ -0.49
PTCH1-226ENST00000553011 CHODLQ9H9P2 273 aa11.97□□□□□ -0.49
PTCH1-226ENST00000553011 TMEM100Q9NV29 134 aa11.97□□□□□ -0.49
PTCH1-226ENST00000553011 IGHV4-61A0A0C4DH41 118 aa11.96□□□□□ -0.49
PTCH1-226ENST00000553011 IGHV3-64DA0A0J9YX35 117 aa11.96□□□□□ -0.49
PTCH1-226ENST00000553011 SNTNA6NMZ2 147 aa11.96□□□□□ -0.49
PTCH1-226ENST00000553011 F5H5P2 479 aa11.96□□□□□ -0.49
PTCH1-226ENST00000553011 J3QRE1 110 aa11.96□□□□□ -0.49
PTCH1-226ENST00000553011 SRSF10O75494 262 aaKnown RBP11.96□□□□□ -0.49
PTCH1-226ENST00000553011 KRT8P05787 483 aa11.96□□□□□ -0.49
PTCH1-226ENST00000553011 DBTP11182 482 aaKnown RBP11.96□□□□□ -0.49
PTCH1-226ENST00000553011 TNFSF4P23510 183 aa11.96□□□□□ -0.49
PTCH1-226ENST00000553011 DCTDP32321 178 aa11.96□□□□□ -0.49
PTCH1-226ENST00000553011 CAPGP40121 348 aa11.96□□□□□ -0.49
PTCH1-226ENST00000553011 ZNF829Q3KNS6 432 aaPredicted RBP11.96□□□□□ -0.49
PTCH1-226ENST00000553011 ZNF684Q5T5D7 378 aa11.96□□□□□ -0.49
PTCH1-226ENST00000553011 YIPF7Q8N8F6 280 aa11.96□□□□□ -0.49
PTCH1-226ENST00000553011 DVL3Q92997 716 aaPredicted RBP11.96□□□□□ -0.49
PTCH1-226ENST00000553011 LYZL4Q96KX0 146 aa11.96□□□□□ -0.49
PTCH1-226ENST00000553011 OR2V2Q96R30 315 aa11.96□□□□□ -0.49
PTCH1-226ENST00000553011 VCXQ9H320 206 aa11.96□□□□□ -0.49
PTCH1-226ENST00000553011 OPA3Q9H6K4 179 aa11.96□□□□□ -0.49
PTCH1-226ENST00000553011 DOCK11Q5JSL3 2073 aa11.95□□□□□ -0.5
PTCH1-226ENST00000553011 FN1P02751 2386 aaKnown RBP11.95□□□□□ -0.5
PTCH1-226ENST00000553011 A0A1B0GWJ7 208 aa11.95□□□□□ -0.5
PTCH1-226ENST00000553011 METTL15A6NJ78 407 aa11.95□□□□□ -0.5
PTCH1-226ENST00000553011 PPIHO43447 177 aaKnown RBP11.95□□□□□ -0.5
PTCH1-226ENST00000553011 RPP14O95059 124 aaKnown RBP11.95□□□□□ -0.5
PTCH1-226ENST00000553011 GNAO1P09471 354 aa11.95□□□□□ -0.5
PTCH1-226ENST00000553011 USF1P22415 310 aaPredicted RBP11.95□□□□□ -0.5
PTCH1-226ENST00000553011 CA6P23280 308 aa11.95□□□□□ -0.5
PTCH1-226ENST00000553011 GPR6P46095 362 aaPredicted RBP11.95□□□□□ -0.5
PTCH1-226ENST00000553011 GSK3AP49840 483 aa11.95□□□□□ -0.5
PTCH1-226ENST00000553011 MMP16P51512 607 aa11.95□□□□□ -0.5
PTCH1-226ENST00000553011 ISL1P61371 349 aa11.95□□□□□ -0.5
PTCH1-226ENST00000553011 LOXL1Q08397 574 aaPredicted RBP11.95□□□□□ -0.5
PTCH1-226ENST00000553011 TP53I3Q53FA7 332 aa11.95□□□□□ -0.5
PTCH1-226ENST00000553011 BIVMQ86UB2 503 aa11.95□□□□□ -0.5
PTCH1-226ENST00000553011 SETD9Q8NE22 299 aa11.95□□□□□ -0.5
PTCH1-226ENST00000553011 CCL17Q92583 94 aa11.95□□□□□ -0.5
PTCH1-226ENST00000553011 MEGF10Q96KG7 1140 aa11.95□□□□□ -0.5
PTCH1-226ENST00000553011 SIGLEC11Q96RL6 698 aa11.95□□□□□ -0.5
PTCH1-226ENST00000553011 PBOV1Q9GZY1 135 aa11.95□□□□□ -0.5
PTCH1-226ENST00000553011 RGCCQ9H4X1 137 aa11.95□□□□□ -0.5
PTCH1-226ENST00000553011 DCAF16Q9NXF7 216 aa11.95□□□□□ -0.5
PTCH1-226ENST00000553011 IL19Q9UHD0 177 aa11.95□□□□□ -0.5
PTCH1-226ENST00000553011 NUFIP1Q9UHK0 495 aaKnown RBP11.95□□□□□ -0.5
PTCH1-226ENST00000553011 GTF2A1LQ9UNN4 478 aa11.95□□□□□ -0.5
PTCH1-226ENST00000553011 EXOGQ9Y2C4 368 aaKnown RBP11.95□□□□□ -0.5
PTCH1-226ENST00000553011 R4GMQ9 66 aa11.95□□□□□ -0.5
PTCH1-226ENST00000553011 ARHGAP32A7KAX9 2087 aa11.95□□□□□ -0.5
PTCH1-226ENST00000553011 DAPL1A0PJW8 107 aa11.94□□□□□ -0.5
PTCH1-226ENST00000553011 ACOD1A6NK06 481 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms