RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 GABRA5P31644 462 aa11.67□□□□□ -0.54
CHMP1A-210ENST00000551981 KLF10Q13118 480 aa11.67□□□□□ -0.54
CHMP1A-210ENST00000551981 DGCR6Q14129 220 aa11.67□□□□□ -0.54
CHMP1A-210ENST00000551981 HERPUD1Q15011 391 aa11.67□□□□□ -0.54
CHMP1A-210ENST00000551981 MICBQ29980 383 aa11.67□□□□□ -0.54
CHMP1A-210ENST00000551981 TEX36Q5VZQ5 186 aa11.67□□□□□ -0.54
CHMP1A-210ENST00000551981 CBLL1Q75N03 491 aa11.67□□□□□ -0.54
CHMP1A-210ENST00000551981 ARPINQ7Z6K5 226 aa11.67□□□□□ -0.54
CHMP1A-210ENST00000551981 NAA40Q86UY6 237 aa11.67□□□□□ -0.54
CHMP1A-210ENST00000551981 GCSAMQ8N6F7 178 aa11.67□□□□□ -0.54
CHMP1A-210ENST00000551981 ZNF799Q96GE5 643 aa11.67□□□□□ -0.54
CHMP1A-210ENST00000551981 DMRTB1Q96MA1 342 aa11.67□□□□□ -0.54
CHMP1A-210ENST00000551981 ERMAPQ96PL5 475 aaPredicted RBP11.67□□□□□ -0.54
CHMP1A-210ENST00000551981 SEMA6AQ9H2E6 1030 aa11.67□□□□□ -0.54
CHMP1A-210ENST00000551981 FBLN5Q9UBX5 448 aa11.67□□□□□ -0.54
CHMP1A-210ENST00000551981 FAM32AQ9Y421 112 aaKnown RBP11.67□□□□□ -0.54
CHMP1A-210ENST00000551981 ENPP4Q9Y6X5 453 aa11.67□□□□□ -0.54
CHMP1A-210ENST00000551981 KMT2CQ8NEZ4 4911 aaKnown RBP11.66□□□□□ -0.54
CHMP1A-210ENST00000551981 LOC100653049A0A140TA62 436 aa11.66□□□□□ -0.54
CHMP1A-210ENST00000551981 NPFFO15130 113 aa11.66□□□□□ -0.54
CHMP1A-210ENST00000551981 GPR37O15354 613 aa11.66□□□□□ -0.54
CHMP1A-210ENST00000551981 KRT34O76011 436 aa11.66□□□□□ -0.54
CHMP1A-210ENST00000551981 SERPINA1P01009 418 aa11.66□□□□□ -0.54
CHMP1A-210ENST00000551981 LHBP01229 141 aa11.66□□□□□ -0.54
CHMP1A-210ENST00000551981 TROVE2P10155 538 aaKnown RBP eCLIP11.66□□□□□ -0.54
CHMP1A-210ENST00000551981 MUC1P15941 1255 aaPredicted RBP11.66□□□□□ -0.54
CHMP1A-210ENST00000551981 GRK5P34947 590 aa11.66□□□□□ -0.54
CHMP1A-210ENST00000551981 OMPP47874 163 aa11.66□□□□□ -0.54
CHMP1A-210ENST00000551981 ZNF92Q03936 586 aa11.66□□□□□ -0.54
CHMP1A-210ENST00000551981 FAM189A2Q15884 450 aa11.66□□□□□ -0.54
CHMP1A-210ENST00000551981 RFX4Q33E94 735 aa11.66□□□□□ -0.54
CHMP1A-210ENST00000551981 SAMD5Q5TGI4 173 aa11.66□□□□□ -0.54
CHMP1A-210ENST00000551981 SLC35E4Q6ICL7 350 aa11.66□□□□□ -0.54
CHMP1A-210ENST00000551981 C11orf88Q6PI97 169 aa11.66□□□□□ -0.54
CHMP1A-210ENST00000551981 Q6ZPA2 131 aa11.66□□□□□ -0.54
CHMP1A-210ENST00000551981 ZNF826PQ6ZT77 177 aa11.66□□□□□ -0.54
CHMP1A-210ENST00000551981 SLC36A1Q7Z2H8 476 aa11.66□□□□□ -0.54
CHMP1A-210ENST00000551981 LY6G5BQ8NDX9 201 aa11.66□□□□□ -0.54
CHMP1A-210ENST00000551981 OR2AE1Q8NHA4 323 aa11.66□□□□□ -0.54
CHMP1A-210ENST00000551981 FANK1Q8TC84 345 aa11.66□□□□□ -0.54
CHMP1A-210ENST00000551981 NMNAT3Q96T66 252 aa11.66□□□□□ -0.54
CHMP1A-210ENST00000551981 PNRC2Q9NPJ4 139 aaKnown RBP11.66□□□□□ -0.54
CHMP1A-210ENST00000551981 RPRD1BQ9NQG5 326 aaKnown RBP11.66□□□□□ -0.54
CHMP1A-210ENST00000551981 SIRT7Q9NRC8 400 aa11.66□□□□□ -0.54
CHMP1A-210ENST00000551981 KCNG2Q9UJ96 466 aa11.66□□□□□ -0.54
CHMP1A-210ENST00000551981 IGHV3OR15-7A0A075B7D8 119 aa11.65□□□□□ -0.54
CHMP1A-210ENST00000551981 RNASEK-C17orf49H0YIS7 233 aa11.65□□□□□ -0.54
CHMP1A-210ENST00000551981 BHLHE40O14503 412 aa11.65□□□□□ -0.54
CHMP1A-210ENST00000551981 NDUFB3O43676 98 aa11.65□□□□□ -0.54
CHMP1A-210ENST00000551981 FCN3O75636 299 aa11.65□□□□□ -0.54
CHMP1A-210ENST00000551981 NOS3P29474 1203 aa11.65□□□□□ -0.54
CHMP1A-210ENST00000551981 SLC6A6P31641 620 aa11.65□□□□□ -0.54
CHMP1A-210ENST00000551981 FXYD6P3P58550 94 aa11.65□□□□□ -0.54
CHMP1A-210ENST00000551981 LIPEQ05469 1076 aa11.65□□□□□ -0.54
CHMP1A-210ENST00000551981 POU4F2Q12837 409 aa11.65□□□□□ -0.54
CHMP1A-210ENST00000551981 SNAI3Q3KNW1 292 aa11.65□□□□□ -0.54
CHMP1A-210ENST00000551981 ZBTB46Q86UZ6 589 aa11.65□□□□□ -0.54
CHMP1A-210ENST00000551981 OR4C15Q8NGM1 316 aa11.65□□□□□ -0.54
CHMP1A-210ENST00000551981 OR8S1Q8NH09 359 aa11.65□□□□□ -0.54
CHMP1A-210ENST00000551981 OR4K13Q8NH42 304 aa11.65□□□□□ -0.54
CHMP1A-210ENST00000551981 PPP1R14AQ96A00 147 aa11.65□□□□□ -0.54
CHMP1A-210ENST00000551981 CCL13Q99616 98 aa11.65□□□□□ -0.54
CHMP1A-210ENST00000551981 NSRP1Q9H0G5 558 aaKnown RBP11.65□□□□□ -0.54
CHMP1A-210ENST00000551981 PPA2Q9H2U2 334 aa11.65□□□□□ -0.54
CHMP1A-210ENST00000551981 OPA3Q9H6K4 179 aa11.65□□□□□ -0.54
CHMP1A-210ENST00000551981 RNPEPL1Q9HAU8 725 aa11.65□□□□□ -0.54
CHMP1A-210ENST00000551981 SAR1AQ9NR31 198 aa11.65□□□□□ -0.54
CHMP1A-210ENST00000551981 CMTM6Q9NX76 183 aa11.65□□□□□ -0.54
CHMP1A-210ENST00000551981 ANKRD30BLA7E2S9 258 aa11.64□□□□□ -0.55
CHMP1A-210ENST00000551981 HMGB1P1B2RPK0 211 aaPredicted RBP11.64□□□□□ -0.55
CHMP1A-210ENST00000551981 ARPC3O15145 178 aa11.64□□□□□ -0.55
CHMP1A-210ENST00000551981 PRB2P02812 416 aaPredicted RBP11.64□□□□□ -0.55
CHMP1A-210ENST00000551981 HIST1H1CP16403 213 aaKnown RBP11.64□□□□□ -0.55
CHMP1A-210ENST00000551981 ZNF823P16415 610 aa11.64□□□□□ -0.55
CHMP1A-210ENST00000551981 RHCEP18577 417 aa11.64□□□□□ -0.55
CHMP1A-210ENST00000551981 PCK2Q16822 640 aa11.64□□□□□ -0.55
CHMP1A-210ENST00000551981 WDR38Q5JTN6 314 aa11.64□□□□□ -0.55
CHMP1A-210ENST00000551981 GLYATL3Q5SZD4 288 aa11.64□□□□□ -0.55
CHMP1A-210ENST00000551981 DRAM2Q6UX65 266 aa11.64□□□□□ -0.55
CHMP1A-210ENST00000551981 LNX2Q8N448 690 aa11.64□□□□□ -0.55
CHMP1A-210ENST00000551981 OR4C13Q8NGP0 309 aa11.64□□□□□ -0.55
CHMP1A-210ENST00000551981 LRRC29Q8WV35 223 aa11.64□□□□□ -0.55
CHMP1A-210ENST00000551981 FAM162AQ96A26 154 aa11.64□□□□□ -0.55
CHMP1A-210ENST00000551981 C12orf43Q96C57 262 aaKnown RBP11.64□□□□□ -0.55
CHMP1A-210ENST00000551981 RCN3Q96D15 328 aa11.64□□□□□ -0.55
CHMP1A-210ENST00000551981 MAP6Q96JE9 813 aa11.64□□□□□ -0.55
CHMP1A-210ENST00000551981 IFT27Q9BW83 186 aa11.64□□□□□ -0.55
CHMP1A-210ENST00000551981 GMPR2Q9P2T1 348 aaKnown RBP11.64□□□□□ -0.55
CHMP1A-210ENST00000551981 DNAH3Q8TD57 4116 aa11.63□□□□□ -0.55
CHMP1A-210ENST00000551981 TRBV4-1A0A0J9YWV2 114 aa11.63□□□□□ -0.55
CHMP1A-210ENST00000551981 A0A1W2PRD5 423 aa11.63□□□□□ -0.55
CHMP1A-210ENST00000551981 A0A1W2PRF3 423 aa11.63□□□□□ -0.55
CHMP1A-210ENST00000551981 A0A1W2PRM7 423 aa11.63□□□□□ -0.55
CHMP1A-210ENST00000551981 MEIOCA2RUB1 952 aa11.63□□□□□ -0.55
CHMP1A-210ENST00000551981 DDOSTP39656 456 aa11.63□□□□□ -0.55
CHMP1A-210ENST00000551981 NAA10P41227 235 aaPredicted RBP11.63□□□□□ -0.55
CHMP1A-210ENST00000551981 KRT72Q14CN4 511 aa11.63□□□□□ -0.55
CHMP1A-210ENST00000551981 SEC23BQ15437 767 aa11.63□□□□□ -0.55
CHMP1A-210ENST00000551981 LRRC10Q5BKY1 277 aa11.63□□□□□ -0.55
CHMP1A-210ENST00000551981 NCR3LG1Q68D85 454 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms