RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 CCDC71LQ8N9Z2 235 aa3.97□□□□□ -1.77
CPSF6-206ENST00000550987 MAPK1IP1LQ8NDC0 245 aa3.97□□□□□ -1.77
CPSF6-206ENST00000550987 B3GNT7Q8NFL0 401 aa3.97□□□□□ -1.77
CPSF6-206ENST00000550987 OR2G2Q8NGZ5 317 aa3.97□□□□□ -1.77
CPSF6-206ENST00000550987 CDC26Q8NHZ8 85 aa3.97□□□□□ -1.77
CPSF6-206ENST00000550987 FAM222BQ8WU58 562 aa3.97□□□□□ -1.77
CPSF6-206ENST00000550987 ELMO1Q92556 727 aa3.97□□□□□ -1.77
CPSF6-206ENST00000550987 TNFRSF14Q92956 283 aa3.97□□□□□ -1.77
CPSF6-206ENST00000550987 CCDC126Q96EE4 140 aa3.97□□□□□ -1.77
CPSF6-206ENST00000550987 CEP170P1Q96L14 293 aa3.97□□□□□ -1.77
CPSF6-206ENST00000550987 ZNF184Q99676 751 aaPredicted RBP3.97□□□□□ -1.77
CPSF6-206ENST00000550987 POLR2J2Q9GZM3 115 aaKnown RBP3.97□□□□□ -1.77
CPSF6-206ENST00000550987 POLR2J3Q9H1A7 115 aaKnown RBP3.97□□□□□ -1.77
CPSF6-206ENST00000550987 CYP3A43Q9HB55 503 aa3.97□□□□□ -1.77
CPSF6-206ENST00000550987 INPP5EQ9NRR6 644 aa3.97□□□□□ -1.77
CPSF6-206ENST00000550987 MRPL22Q9NWU5 206 aaKnown RBP3.97□□□□□ -1.77
CPSF6-206ENST00000550987 GIN1Q9NXP7 522 aa3.97□□□□□ -1.77
CPSF6-206ENST00000550987 MMP17Q9ULZ9 603 aa3.97□□□□□ -1.77
CPSF6-206ENST00000550987 IGKV1D-8A0A087WSZ0 117 aa3.96□□□□□ -1.78
CPSF6-206ENST00000550987 IGHV1OR21-1A0A087WYE8 117 aa3.96□□□□□ -1.78
CPSF6-206ENST00000550987 A0A1B0GU03 582 aa3.96□□□□□ -1.78
CPSF6-206ENST00000550987 A0A1W2PPV9 198 aa3.96□□□□□ -1.78
CPSF6-206ENST00000550987 A0A1W2PQ72 361 aa3.96□□□□□ -1.78
CPSF6-206ENST00000550987 TMEM210A6NLX4 147 aa3.96□□□□□ -1.78
CPSF6-206ENST00000550987 C12orf71A8MTZ7 269 aa3.96□□□□□ -1.78
CPSF6-206ENST00000550987 GOLGA8TH3BQL2 631 aa3.96□□□□□ -1.78
CPSF6-206ENST00000550987 C19orf84I3L1E1 186 aa3.96□□□□□ -1.78
CPSF6-206ENST00000550987 I3L4J1 428 aa3.96□□□□□ -1.78
CPSF6-206ENST00000550987 GOSR2O14653 212 aa3.96□□□□□ -1.78
CPSF6-206ENST00000550987 SOX15O60248 233 aa3.96□□□□□ -1.78
CPSF6-206ENST00000550987 SERF1AO75920 110 aa3.96□□□□□ -1.78
CPSF6-206ENST00000550987 SNAPINO95295 136 aa3.96□□□□□ -1.78
CPSF6-206ENST00000550987 SEMG1P04279 462 aa3.96□□□□□ -1.78
CPSF6-206ENST00000550987 GLAP06280 429 aa3.96□□□□□ -1.78
CPSF6-206ENST00000550987 C2P06681 752 aa3.96□□□□□ -1.78
CPSF6-206ENST00000550987 ANXA5P08758 320 aa3.96□□□□□ -1.78
CPSF6-206ENST00000550987 GATA1P15976 413 aaPredicted RBP3.96□□□□□ -1.78
CPSF6-206ENST00000550987 TBPP20226 339 aa3.96□□□□□ -1.78
CPSF6-206ENST00000550987 FASP25445 335 aa3.96□□□□□ -1.78
CPSF6-206ENST00000550987 GLP1RP43220 463 aa3.96□□□□□ -1.78
CPSF6-206ENST00000550987 GDI2P50395 445 aaKnown RBP3.96□□□□□ -1.78
CPSF6-206ENST00000550987 PSMC5P62195 406 aa3.96□□□□□ -1.78
CPSF6-206ENST00000550987 ERVK-25P63136 954 aa3.96□□□□□ -1.78
CPSF6-206ENST00000550987 CSNK1G2P78368 415 aa3.96□□□□□ -1.78
CPSF6-206ENST00000550987 MRPS22P82650 360 aaKnown RBP3.96□□□□□ -1.78
CPSF6-206ENST00000550987 TGFBR3Q03167 851 aa3.96□□□□□ -1.78
CPSF6-206ENST00000550987 TWF1Q12792 350 aa3.96□□□□□ -1.78
CPSF6-206ENST00000550987 ARFRP1Q13795 201 aa3.96□□□□□ -1.78
CPSF6-206ENST00000550987 CASP8Q14790 479 aa3.96□□□□□ -1.78
CPSF6-206ENST00000550987 PLCXD3Q63HM9 321 aa3.96□□□□□ -1.78
CPSF6-206ENST00000550987 SPECC1LQ69YQ0 1117 aa3.96□□□□□ -1.78
CPSF6-206ENST00000550987 TTC23LQ6PF05 361 aa3.96□□□□□ -1.78
CPSF6-206ENST00000550987 UNQ9370/PRO34162Q6UXP9 181 aa3.96□□□□□ -1.78
CPSF6-206ENST00000550987 TMIGD1Q6UXZ0 262 aa3.96□□□□□ -1.78
CPSF6-206ENST00000550987 SCARA5Q6ZMJ2 495 aa3.96□□□□□ -1.78
CPSF6-206ENST00000550987 LINC00523Q86TU6 105 aa3.96□□□□□ -1.78
CPSF6-206ENST00000550987 LRRC6Q86X45 466 aa3.96□□□□□ -1.78
CPSF6-206ENST00000550987 ZNF677Q86XU0 584 aa3.96□□□□□ -1.78
CPSF6-206ENST00000550987 MICU2Q8IYU8 434 aa3.96□□□□□ -1.78
CPSF6-206ENST00000550987 FAM58AQ8N1B3 248 aa3.96□□□□□ -1.78
CPSF6-206ENST00000550987 ASCC1Q8N9N2 400 aaKnown RBP3.96□□□□□ -1.78
CPSF6-206ENST00000550987 TYMSOSQ8TAI1 123 aa3.96□□□□□ -1.78
CPSF6-206ENST00000550987 PLPPR1Q8TBJ4 325 aa3.96□□□□□ -1.78
CPSF6-206ENST00000550987 ENKURQ8TC29 256 aa3.96□□□□□ -1.78
CPSF6-206ENST00000550987 GLYATL2Q8WU03 294 aa3.96□□□□□ -1.78
CPSF6-206ENST00000550987 ITLN2Q8WWU7 325 aaPredicted RBP3.96□□□□□ -1.78
CPSF6-206ENST00000550987 MARC2Q969Z3 335 aa3.96□□□□□ -1.78
CPSF6-206ENST00000550987 FOXN4Q96NZ1 517 aa3.96□□□□□ -1.78
CPSF6-206ENST00000550987 MS4A4EQ96PG1 132 aa3.96□□□□□ -1.78
CPSF6-206ENST00000550987 P2RY13Q9BPV8 354 aa3.96□□□□□ -1.78
CPSF6-206ENST00000550987 PAXXQ9BUH6 204 aa3.96□□□□□ -1.78
CPSF6-206ENST00000550987 C9orf16Q9BUW7 83 aa3.96□□□□□ -1.78
CPSF6-206ENST00000550987 TEKT3Q9BXF9 490 aa3.96□□□□□ -1.78
CPSF6-206ENST00000550987 TMEM59Q9BXS4 323 aa3.96□□□□□ -1.78
CPSF6-206ENST00000550987 FRMD8P1Q9BZ68 369 aaPredicted RBP3.96□□□□□ -1.78
CPSF6-206ENST00000550987 RNF167Q9H6Y7 350 aa3.96□□□□□ -1.78
CPSF6-206ENST00000550987 GEMIN7Q9H840 131 aaKnown RBP3.96□□□□□ -1.78
CPSF6-206ENST00000550987 MRPL47Q9HD33 250 aaKnown RBP3.96□□□□□ -1.78
CPSF6-206ENST00000550987 ZNF275Q9NSD4 429 aaPredicted RBP3.96□□□□□ -1.78
CPSF6-206ENST00000550987 PTTG3PQ9NZH4 202 aa3.96□□□□□ -1.78
CPSF6-206ENST00000550987 CD274Q9NZQ7 290 aa3.96□□□□□ -1.78
CPSF6-206ENST00000550987 HMGXB4Q9UGU5 601 aa3.96□□□□□ -1.78
CPSF6-206ENST00000550987 UGT2A1Q9Y4X1 527 aa3.96□□□□□ -1.78
CPSF6-206ENST00000550987 STAB2Q8WWQ8 2551 aa3.96□□□□□ -1.78
CPSF6-206ENST00000550987 PCNX3Q9H6A9 2034 aa3.95□□□□□ -1.78
CPSF6-206ENST00000550987 MYO18AQ92614 2054 aaKnown RBP3.95□□□□□ -1.78
CPSF6-206ENST00000550987 IGHV1OR15-9A0A0B4J2B8 117 aa3.95□□□□□ -1.78
CPSF6-206ENST00000550987 TRBV11-1A0A0K0K1C0 115 aa3.95□□□□□ -1.78
CPSF6-206ENST00000550987 GABRR3A8MPY1 467 aa3.95□□□□□ -1.78
CPSF6-206ENST00000550987 PDZK1P1A8MUH7 402 aa3.95□□□□□ -1.78
CPSF6-206ENST00000550987 TRAPPC3O43617 180 aa3.95□□□□□ -1.78
CPSF6-206ENST00000550987 CLPXO76031 633 aa3.95□□□□□ -1.78
CPSF6-206ENST00000550987 CGAP01215 116 aa3.95□□□□□ -1.78
CPSF6-206ENST00000550987 SRMP19623 302 aa3.95□□□□□ -1.78
CPSF6-206ENST00000550987 PSMB1P20618 241 aaKnown RBP3.95□□□□□ -1.78
CPSF6-206ENST00000550987 CXCR2P25025 360 aa3.95□□□□□ -1.78
CPSF6-206ENST00000550987 GTF2E2P29084 291 aaKnown RBP3.95□□□□□ -1.78
CPSF6-206ENST00000550987 OTX1P32242 354 aaPredicted RBP3.95□□□□□ -1.78
CPSF6-206ENST00000550987 VHLP40337 213 aa3.95□□□□□ -1.78
CPSF6-206ENST00000550987 ARRB1P49407 418 aaPredicted RBP3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms