RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 GAGE12GP0CL81 117 aa4.09□□□□□ -1.75
SCAF11-214ENST00000550893 GAGE12IP0CL82 117 aa4.09□□□□□ -1.75
SCAF11-214ENST00000550893 ADORA3P0DMS8 318 aa4.09□□□□□ -1.75
SCAF11-214ENST00000550893 LYNX1P0DP58 116 aa4.09□□□□□ -1.75
SCAF11-214ENST00000550893 TROVE2P10155 538 aaKnown RBP eCLIP4.09□□□□□ -1.75
SCAF11-214ENST00000550893 CCL2P13500 99 aa4.09□□□□□ -1.75
SCAF11-214ENST00000550893 HSD17B1P14061 328 aa4.09□□□□□ -1.75
SCAF11-214ENST00000550893 UQCRBP14927 111 aa4.09□□□□□ -1.75
SCAF11-214ENST00000550893 CTLA4P16410 223 aa4.09□□□□□ -1.75
SCAF11-214ENST00000550893 ZNF43P17038 809 aa4.09□□□□□ -1.75
SCAF11-214ENST00000550893 EDN2P20800 178 aa4.09□□□□□ -1.75
SCAF11-214ENST00000550893 IGFBP5P24593 272 aa4.09□□□□□ -1.75
SCAF11-214ENST00000550893 GIFP27352 417 aa4.09□□□□□ -1.75
SCAF11-214ENST00000550893 MPV17P39210 176 aa4.09□□□□□ -1.75
SCAF11-214ENST00000550893 RBM34P42696 430 aaKnown RBP4.09□□□□□ -1.75
SCAF11-214ENST00000550893 MAGEA2P43356 314 aa4.09□□□□□ -1.75
SCAF11-214ENST00000550893 GPR4P46093 362 aa4.09□□□□□ -1.75
SCAF11-214ENST00000550893 PPOXP50336 477 aa4.09□□□□□ -1.75
SCAF11-214ENST00000550893 NUDT2P50583 147 aa4.09□□□□□ -1.75
SCAF11-214ENST00000550893 BRWD1-AS2P59051 145 aa4.09□□□□□ -1.75
SCAF11-214ENST00000550893 PSME3P61289 254 aa4.09□□□□□ -1.75
SCAF11-214ENST00000550893 COPZ1P61923 177 aa4.09□□□□□ -1.75
SCAF11-214ENST00000550893 SELENOWP63302 87 aa4.09□□□□□ -1.75
SCAF11-214ENST00000550893 MS4A2Q01362 244 aa4.09□□□□□ -1.75
SCAF11-214ENST00000550893 PRKCDQ05655 676 aa4.09□□□□□ -1.75
SCAF11-214ENST00000550893 GAGE1Q13065 139 aa4.09□□□□□ -1.75
SCAF11-214ENST00000550893 GAGE4Q13068 117 aa4.09□□□□□ -1.75
SCAF11-214ENST00000550893 PMS2P3Q13401 168 aa4.09□□□□□ -1.75
SCAF11-214ENST00000550893 CYLC2Q14093 348 aaPredicted RBP4.09□□□□□ -1.75
SCAF11-214ENST00000550893 MAD2L1BPQ15013 274 aaPredicted RBP4.09□□□□□ -1.75
SCAF11-214ENST00000550893 TRIP10Q15642 601 aa4.09□□□□□ -1.75
SCAF11-214ENST00000550893 TMEM249Q2WGJ8 235 aa4.09□□□□□ -1.75
SCAF11-214ENST00000550893 C6orf52Q5T4I8 152 aa4.09□□□□□ -1.75
SCAF11-214ENST00000550893 TMEM225Q6GV28 225 aa4.09□□□□□ -1.75
SCAF11-214ENST00000550893 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.09□□□□□ -1.75
SCAF11-214ENST00000550893 RANBP3LQ86VV4 465 aaPredicted RBP4.09□□□□□ -1.75
SCAF11-214ENST00000550893 SLC30A8Q8IWU4 369 aa4.09□□□□□ -1.75
SCAF11-214ENST00000550893 SVOPLQ8N434 492 aa4.09□□□□□ -1.75
SCAF11-214ENST00000550893 SLC22A24Q8N4F4 322 aa4.09□□□□□ -1.75
SCAF11-214ENST00000550893 ARIH2OSQ8N7S6 290 aa4.09□□□□□ -1.75
SCAF11-214ENST00000550893 ZBTB8BQ8NAP8 495 aaPredicted RBP4.09□□□□□ -1.75
SCAF11-214ENST00000550893 POC1AQ8NBT0 407 aa4.09□□□□□ -1.75
SCAF11-214ENST00000550893 OR4C15Q8NGM1 316 aa4.09□□□□□ -1.75
SCAF11-214ENST00000550893 OR10S1Q8NGN2 331 aa4.09□□□□□ -1.75
SCAF11-214ENST00000550893 TMEM239Q8WW34 195 aa4.09□□□□□ -1.75
SCAF11-214ENST00000550893 SLC25A44Q96H78 314 aaPredicted RBP4.09□□□□□ -1.75
SCAF11-214ENST00000550893 POM121L2Q96KW2 1035 aa4.09□□□□□ -1.75
SCAF11-214ENST00000550893 Q96M85 177 aa4.09□□□□□ -1.75
SCAF11-214ENST00000550893 GPX7Q96SL4 187 aaPredicted RBP4.09□□□□□ -1.75
SCAF11-214ENST00000550893 BTBD10Q9BSF8 475 aa4.09□□□□□ -1.75
SCAF11-214ENST00000550893 ZNF416Q9BWM5 594 aa4.09□□□□□ -1.75
SCAF11-214ENST00000550893 TAPBPLQ9BX59 468 aa4.09□□□□□ -1.75
SCAF11-214ENST00000550893 PLA2G12AQ9BZM1 189 aa4.09□□□□□ -1.75
SCAF11-214ENST00000550893 POLR2J2Q9GZM3 115 aaKnown RBP4.09□□□□□ -1.75
SCAF11-214ENST00000550893 POLR2J3Q9H1A7 115 aaKnown RBP4.09□□□□□ -1.75
SCAF11-214ENST00000550893 DCAF13Q9NV06 445 aaKnown RBP4.09□□□□□ -1.75
SCAF11-214ENST00000550893 ARGLU1Q9NWB6 273 aaPredicted RBP4.09□□□□□ -1.75
SCAF11-214ENST00000550893 PEMTQ9UBM1 199 aa4.09□□□□□ -1.75
SCAF11-214ENST00000550893 CACNG2Q9Y698 323 aa4.09□□□□□ -1.75
SCAF11-214ENST00000550893 ENPP4Q9Y6X5 453 aa4.09□□□□□ -1.75
SCAF11-214ENST00000550893 IGLV1-36A0A0B4J1U3 117 aa4.08□□□□□ -1.76
SCAF11-214ENST00000550893 A0A0B4J293 547 aa4.08□□□□□ -1.76
SCAF11-214ENST00000550893 A0A1B0GWJ7 208 aa4.08□□□□□ -1.76
SCAF11-214ENST00000550893 ZSCAN5BA6NJL1 495 aa4.08□□□□□ -1.76
SCAF11-214ENST00000550893 BMPR1BO00238 502 aa4.08□□□□□ -1.76
SCAF11-214ENST00000550893 SSX4O60224 188 aa4.08□□□□□ -1.76
SCAF11-214ENST00000550893 PEX14O75381 377 aa4.08□□□□□ -1.76
SCAF11-214ENST00000550893 CRLF1O75462 422 aa4.08□□□□□ -1.76
SCAF11-214ENST00000550893 SERPINB7O75635 380 aa4.08□□□□□ -1.76
SCAF11-214ENST00000550893 NDUFB4O95168 129 aa4.08□□□□□ -1.76
SCAF11-214ENST00000550893 MPZL1O95297 269 aa4.08□□□□□ -1.76
SCAF11-214ENST00000550893 SNAP29O95721 258 aa4.08□□□□□ -1.76
SCAF11-214ENST00000550893 NGFP01138 241 aa4.08□□□□□ -1.76
SCAF11-214ENST00000550893 QDPRP09417 244 aa4.08□□□□□ -1.76
SCAF11-214ENST00000550893 TACSTD2P09758 323 aa4.08□□□□□ -1.76
SCAF11-214ENST00000550893 THRBP10828 461 aa4.08□□□□□ -1.76
SCAF11-214ENST00000550893 ZNF250P15622 560 aa4.08□□□□□ -1.76
SCAF11-214ENST00000550893 ACADSP16219 412 aa4.08□□□□□ -1.76
SCAF11-214ENST00000550893 ZNF32P17041 273 aa4.08□□□□□ -1.76
SCAF11-214ENST00000550893 PRDX6P30041 224 aa4.08□□□□□ -1.76
SCAF11-214ENST00000550893 GSSP48637 474 aa4.08□□□□□ -1.76
SCAF11-214ENST00000550893 CSNK1A1P48729 337 aa4.08□□□□□ -1.76
SCAF11-214ENST00000550893 FABP6P51161 128 aa4.08□□□□□ -1.76
SCAF11-214ENST00000550893 PRPS1P60891 318 aa4.08□□□□□ -1.76
SCAF11-214ENST00000550893 HIST1H3AP68431 136 aa4.08□□□□□ -1.76
SCAF11-214ENST00000550893 MRPS34P82930 218 aaKnown RBP4.08□□□□□ -1.76
SCAF11-214ENST00000550893 LOXL1Q08397 574 aaPredicted RBP4.08□□□□□ -1.76
SCAF11-214ENST00000550893 NPRL3Q12980 569 aa4.08□□□□□ -1.76
SCAF11-214ENST00000550893 SNTB2Q13425 540 aaKnown RBP4.08□□□□□ -1.76
SCAF11-214ENST00000550893 C1QTNF12Q5T7M4 302 aa4.08□□□□□ -1.76
SCAF11-214ENST00000550893 HIST2H3PS2Q5TEC6 136 aa4.08□□□□□ -1.76
SCAF11-214ENST00000550893 KRT80Q6KB66 452 aa4.08□□□□□ -1.76
SCAF11-214ENST00000550893 ERICH5Q6P6B1 374 aa4.08□□□□□ -1.76
SCAF11-214ENST00000550893 PODNL1Q6PEZ8 512 aa4.08□□□□□ -1.76
SCAF11-214ENST00000550893 SLC22A25Q6T423 547 aa4.08□□□□□ -1.76
SCAF11-214ENST00000550893 UNQ6126/PRO20091Q6UXV3 157 aa4.08□□□□□ -1.76
SCAF11-214ENST00000550893 Q6ZR03 302 aa4.08□□□□□ -1.76
SCAF11-214ENST00000550893 TMPRSS11FQ6ZWK6 438 aa4.08□□□□□ -1.76
SCAF11-214ENST00000550893 MBOAT2Q6ZWT7 520 aa4.08□□□□□ -1.76
SCAF11-214ENST00000550893 HIST2H3AQ71DI3 136 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms