RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 CDCA4Q9BXL8 241 aa11.14□□□□□ -0.63
RAB5C-206ENST00000550406 CACNG6Q9BXT2 260 aa11.14□□□□□ -0.63
RAB5C-206ENST00000550406 SP140LQ9H930 580 aa11.14□□□□□ -0.63
RAB5C-206ENST00000550406 SPG11Q96JI7 2443 aa11.14□□□□□ -0.63
RAB5C-206ENST00000550406 TACC2O95359 2948 aa11.13□□□□□ -0.63
RAB5C-206ENST00000550406 A0A0U1RQV5 110 aa11.13□□□□□ -0.63
RAB5C-206ENST00000550406 hCG_38984A0A1B0GV85 526 aa11.13□□□□□ -0.63
RAB5C-206ENST00000550406 OR4C45A6NMZ5 311 aa11.13□□□□□ -0.63
RAB5C-206ENST00000550406 IQCF6A8MYZ5 107 aa11.13□□□□□ -0.63
RAB5C-206ENST00000550406 NDUFS7O75251 213 aa11.13□□□□□ -0.63
RAB5C-206ENST00000550406 NAT2P11245 290 aa11.13□□□□□ -0.63
RAB5C-206ENST00000550406 MYL12AP19105 171 aa11.13□□□□□ -0.63
RAB5C-206ENST00000550406 ACKR3P25106 362 aa11.13□□□□□ -0.63
RAB5C-206ENST00000550406 MALLQ13021 153 aa11.13□□□□□ -0.63
RAB5C-206ENST00000550406 TIGD6Q17RP2 521 aa11.13□□□□□ -0.63
RAB5C-206ENST00000550406 Q6ZSR3 168 aa11.13□□□□□ -0.63
RAB5C-206ENST00000550406 PGAP1Q75T13 922 aa11.13□□□□□ -0.63
RAB5C-206ENST00000550406 FAM220AQ7Z4H9 259 aa11.13□□□□□ -0.63
RAB5C-206ENST00000550406 KLBQ86Z14 1044 aa11.13□□□□□ -0.63
RAB5C-206ENST00000550406 OR5AS1Q8N127 324 aa11.13□□□□□ -0.63
RAB5C-206ENST00000550406 KLHL36Q8N4N3 616 aa11.13□□□□□ -0.63
RAB5C-206ENST00000550406 OR52N1Q8NH53 320 aa11.13□□□□□ -0.63
RAB5C-206ENST00000550406 OR51E1Q8TCB6 317 aa11.13□□□□□ -0.63
RAB5C-206ENST00000550406 GATAD2BQ8WXI9 593 aa11.13□□□□□ -0.63
RAB5C-206ENST00000550406 YTHDF1Q9BYJ9 559 aaKnown RBP11.13□□□□□ -0.63
RAB5C-206ENST00000550406 GTF2A1LQ9UNN4 478 aa11.13□□□□□ -0.63
RAB5C-206ENST00000550406 LSM2Q9Y333 95 aaKnown RBP11.13□□□□□ -0.63
RAB5C-206ENST00000550406 USF3Q68DE3 2245 aa11.13□□□□□ -0.63
RAB5C-206ENST00000550406 MAST4O15021 2626 aa11.13□□□□□ -0.63
RAB5C-206ENST00000550406 A0A1W2PPW3 197 aa11.12□□□□□ -0.63
RAB5C-206ENST00000550406 TRIM64A6NGJ6 449 aa11.12□□□□□ -0.63
RAB5C-206ENST00000550406 ZSCAN5BA6NJL1 495 aa11.12□□□□□ -0.63
RAB5C-206ENST00000550406 CD300LBA8K4G0 201 aa11.12□□□□□ -0.63
RAB5C-206ENST00000550406 P2RY10O00398 339 aa11.12□□□□□ -0.63
RAB5C-206ENST00000550406 OGG1O15527 345 aa11.12□□□□□ -0.63
RAB5C-206ENST00000550406 RGS10O43665 173 aa11.12□□□□□ -0.63
RAB5C-206ENST00000550406 MT-ND5P03915 603 aa11.12□□□□□ -0.63
RAB5C-206ENST00000550406 PAX1P15863 534 aa11.12□□□□□ -0.63
RAB5C-206ENST00000550406 GSK3AP49840 483 aa11.12□□□□□ -0.63
RAB5C-206ENST00000550406 CCR9P51686 369 aa11.12□□□□□ -0.63
RAB5C-206ENST00000550406 ALKBH1Q13686 389 aaKnown RBP11.12□□□□□ -0.63
RAB5C-206ENST00000550406 OR8B8Q15620 311 aa11.12□□□□□ -0.63
RAB5C-206ENST00000550406 ODF4Q2M2E3 257 aa11.12□□□□□ -0.63
RAB5C-206ENST00000550406 GFOD2Q3B7J2 385 aa11.12□□□□□ -0.63
RAB5C-206ENST00000550406 BCL2L15Q5TBC7 163 aa11.12□□□□□ -0.63
RAB5C-206ENST00000550406 TMPRSS11AQ6ZMR5 421 aa11.12□□□□□ -0.63
RAB5C-206ENST00000550406 PRSS48Q7RTY5 328 aa11.12□□□□□ -0.63
RAB5C-206ENST00000550406 MRPL21Q7Z2W9 205 aaKnown RBP11.12□□□□□ -0.63
RAB5C-206ENST00000550406 RDH10Q8IZV5 341 aa11.12□□□□□ -0.63
RAB5C-206ENST00000550406 PLPP7Q8NBV4 271 aa11.12□□□□□ -0.63
RAB5C-206ENST00000550406 RPS4Y2Q8TD47 263 aa11.12□□□□□ -0.63
RAB5C-206ENST00000550406 MRPL48Q96GC5 212 aaKnown RBP11.12□□□□□ -0.63
RAB5C-206ENST00000550406 OR5M11Q96RB7 305 aa11.12□□□□□ -0.63
RAB5C-206ENST00000550406 PPP1R3EQ9H7J1 279 aa11.12□□□□□ -0.63
RAB5C-206ENST00000550406 MOB1AQ9H8S9 216 aa11.12□□□□□ -0.63
RAB5C-206ENST00000550406 MSL2Q9HCI7 577 aa11.12□□□□□ -0.63
RAB5C-206ENST00000550406 GPR84Q9NQS5 396 aa11.12□□□□□ -0.63
RAB5C-206ENST00000550406 ZNF701Q9NV72 531 aaPredicted RBP11.12□□□□□ -0.63
RAB5C-206ENST00000550406 BABAM2Q9NXR7 383 aa11.12□□□□□ -0.63
RAB5C-206ENST00000550406 TANC2Q9HCD6 1990 aa11.12□□□□□ -0.63
RAB5C-206ENST00000550406 CSMD2Q7Z408 3487 aa11.11□□□□□ -0.63
RAB5C-206ENST00000550406 A0A1B0GWJ7 208 aa11.11□□□□□ -0.63
RAB5C-206ENST00000550406 H0YL77 283 aa11.11□□□□□ -0.63
RAB5C-206ENST00000550406 H7C417 338 aa11.11□□□□□ -0.63
RAB5C-206ENST00000550406 TIMM8AO60220 97 aaPredicted RBP11.11□□□□□ -0.63
RAB5C-206ENST00000550406 LMX1BO60663 402 aa11.11□□□□□ -0.63
RAB5C-206ENST00000550406 CCL1P22362 96 aa11.11□□□□□ -0.63
RAB5C-206ENST00000550406 MAP2K4P45985 399 aa11.11□□□□□ -0.63
RAB5C-206ENST00000550406 TGM4P49221 684 aa11.11□□□□□ -0.63
RAB5C-206ENST00000550406 PPOXP50336 477 aa11.11□□□□□ -0.63
RAB5C-206ENST00000550406 GBX2P52951 348 aaPredicted RBP11.11□□□□□ -0.63
RAB5C-206ENST00000550406 CDH15P55291 814 aa11.11□□□□□ -0.63
RAB5C-206ENST00000550406 SELENOVP59797 346 aa11.11□□□□□ -0.63
RAB5C-206ENST00000550406 GABARAPL2P60520 117 aa11.11□□□□□ -0.63
RAB5C-206ENST00000550406 SNRPD2P62316 118 aaKnown RBP11.11□□□□□ -0.63
RAB5C-206ENST00000550406 NKPD1Q17RQ9 610 aa11.11□□□□□ -0.63
RAB5C-206ENST00000550406 SPRNQ5BIV9 151 aa11.11□□□□□ -0.63
RAB5C-206ENST00000550406 CDH24Q86UP0 819 aa11.11□□□□□ -0.63
RAB5C-206ENST00000550406 BHLHE23Q8NDY6 225 aa11.11□□□□□ -0.63
RAB5C-206ENST00000550406 OR8G5Q8NG78 346 aa11.11□□□□□ -0.63
RAB5C-206ENST00000550406 OR56B2PQ8NGI1 322 aa11.11□□□□□ -0.63
RAB5C-206ENST00000550406 OR14K1Q8NGZ2 314 aa11.11□□□□□ -0.63
RAB5C-206ENST00000550406 PIGTQ969N2 578 aa11.11□□□□□ -0.63
RAB5C-206ENST00000550406 MBD6Q96DN6 1003 aa11.11□□□□□ -0.63
RAB5C-206ENST00000550406 SORCS2Q96PQ0 1159 aa11.11□□□□□ -0.63
RAB5C-206ENST00000550406 SLC30A2Q9BRI3 323 aa11.11□□□□□ -0.63
RAB5C-206ENST00000550406 RGCCQ9H4X1 137 aa11.11□□□□□ -0.63
RAB5C-206ENST00000550406 CHCHD3Q9NX63 227 aaKnown RBP11.11□□□□□ -0.63
RAB5C-206ENST00000550406 POLQO75417 2590 aa11.11□□□□□ -0.63
RAB5C-206ENST00000550406 DYSFO75923 2080 aa11.1□□□□□ -0.63
RAB5C-206ENST00000550406 GGT3PA6NGU5 568 aa11.1□□□□□ -0.63
RAB5C-206ENST00000550406 C17orf100A8MU93 164 aa11.1□□□□□ -0.63
RAB5C-206ENST00000550406 H3BSH0 61 aa11.1□□□□□ -0.63
RAB5C-206ENST00000550406 M0R233 179 aa11.1□□□□□ -0.63
RAB5C-206ENST00000550406 MLNRO43193 412 aa11.1□□□□□ -0.63
RAB5C-206ENST00000550406 IGHV1-46P01743 117 aa11.1□□□□□ -0.63
RAB5C-206ENST00000550406 DNASE1P24855 282 aa11.1□□□□□ -0.63
RAB5C-206ENST00000550406 WNT4P56705 351 aa11.1□□□□□ -0.63
RAB5C-206ENST00000550406 CDK5R1Q15078 307 aa11.1□□□□□ -0.63
RAB5C-206ENST00000550406 DEFB113Q30KQ7 82 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms