RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 HIST2H3PS2Q5TEC6 136 aa18.35■□□□□ 0.53
PRDM4-205ENST00000550376 AWAT2Q6E213 333 aa18.35■□□□□ 0.53
PRDM4-205ENST00000550376 HIST2H3AQ71DI3 136 aa18.35■□□□□ 0.53
PRDM4-205ENST00000550376 SLC22A24Q8N4F4 322 aa18.35■□□□□ 0.53
PRDM4-205ENST00000550376 CACNA1GO43497 2377 aa18.34■□□□□ 0.53
PRDM4-205ENST00000550376 PRSS3P35030 304 aa18.34■□□□□ 0.53
PRDM4-205ENST00000550376 VEGFCP49767 419 aa18.34■□□□□ 0.53
PRDM4-205ENST00000550376 PSG4Q00888 419 aa18.34■□□□□ 0.53
PRDM4-205ENST00000550376 LINC00303Q3SY05 128 aa18.34■□□□□ 0.53
PRDM4-205ENST00000550376 ZNF766Q5HY98 468 aa18.34■□□□□ 0.53
PRDM4-205ENST00000550376 TMEM104Q8NE00 496 aa18.34■□□□□ 0.53
PRDM4-205ENST00000550376 GIMAP1Q8WWP7 306 aa18.34■□□□□ 0.53
PRDM4-205ENST00000550376 NICN1Q9BSH3 213 aa18.34■□□□□ 0.53
PRDM4-205ENST00000550376 C20orf85Q9H1P6 137 aa18.34■□□□□ 0.53
PRDM4-205ENST00000550376 BANF2Q9H503 90 aa18.34■□□□□ 0.53
PRDM4-205ENST00000550376 LDAHQ9H6V9 325 aa18.34■□□□□ 0.53
PRDM4-205ENST00000550376 ATMQ13315 3056 aa18.34■□□□□ 0.53
PRDM4-205ENST00000550376 KLRC4-KLRK1H3BQV0 150 aa18.34■□□□□ 0.53
PRDM4-205ENST00000550376 H7C417 338 aa18.34■□□□□ 0.53
PRDM4-205ENST00000550376 DHFRP00374 187 aa18.34■□□□□ 0.53
PRDM4-205ENST00000550376 HPXP02790 462 aa18.34■□□□□ 0.53
PRDM4-205ENST00000550376 CD46P15529 392 aa18.34■□□□□ 0.53
PRDM4-205ENST00000550376 SCAND1P57086 179 aa18.34■□□□□ 0.53
PRDM4-205ENST00000550376 ZNF529Q6P280 563 aa18.34■□□□□ 0.53
PRDM4-205ENST00000550376 ZNF101Q8IZC7 436 aa18.34■□□□□ 0.53
PRDM4-205ENST00000550376 NKAIN3Q8N8D7 197 aa18.34■□□□□ 0.53
PRDM4-205ENST00000550376 CPT1CQ8TCG5 803 aa18.34■□□□□ 0.53
PRDM4-205ENST00000550376 PLSCR3Q9NRY6 295 aa18.34■□□□□ 0.53
PRDM4-205ENST00000550376 MTFP1Q9UDX5 166 aa18.34■□□□□ 0.53
PRDM4-205ENST00000550376 KLF13Q9Y2Y9 288 aaPredicted RBP18.34■□□□□ 0.53
PRDM4-205ENST00000550376 SVILO95425 2214 aa18.33■□□□□ 0.53
PRDM4-205ENST00000550376 CD3DP04234 171 aa18.33■□□□□ 0.52
PRDM4-205ENST00000550376 CTSSP25774 331 aa18.33■□□□□ 0.52
PRDM4-205ENST00000550376 MNDAP41218 407 aa18.33■□□□□ 0.52
PRDM4-205ENST00000550376 SLC10A1Q14973 349 aa18.33■□□□□ 0.52
PRDM4-205ENST00000550376 ST3GAL2Q16842 350 aa18.33■□□□□ 0.52
PRDM4-205ENST00000550376 GSG1Q2KHT4 349 aa18.33■□□□□ 0.52
PRDM4-205ENST00000550376 PDSS1Q5T2R2 415 aa18.33■□□□□ 0.52
PRDM4-205ENST00000550376 DOK3Q7L591 496 aa18.33■□□□□ 0.52
PRDM4-205ENST00000550376 SLC16A14Q7RTX9 510 aa18.33■□□□□ 0.52
PRDM4-205ENST00000550376 CHST4Q8NCG5 386 aa18.33■□□□□ 0.52
PRDM4-205ENST00000550376 AKAP1Q92667 903 aaKnown RBP eCLIP18.33■□□□□ 0.52
PRDM4-205ENST00000550376 SGK3Q96BR1 496 aa18.33■□□□□ 0.52
PRDM4-205ENST00000550376 GHITMQ9H3K2 345 aa18.33■□□□□ 0.52
PRDM4-205ENST00000550376 ARPC1BO15143 372 aaKnown RBP18.33■□□□□ 0.52
PRDM4-205ENST00000550376 SYNGR3O43761 229 aa18.33■□□□□ 0.52
PRDM4-205ENST00000550376 ECDO95905 644 aaPredicted RBP18.33■□□□□ 0.52
PRDM4-205ENST00000550376 GTF2F2P13984 249 aa18.33■□□□□ 0.52
PRDM4-205ENST00000550376 BTG1P62324 171 aa18.33■□□□□ 0.52
PRDM4-205ENST00000550376 GLIPR1L1Q6UWM5 242 aa18.33■□□□□ 0.52
PRDM4-205ENST00000550376 BTN2A1Q7KYR7 527 aa18.33■□□□□ 0.52
PRDM4-205ENST00000550376 C1QL2Q7Z5L3 287 aa18.33■□□□□ 0.52
PRDM4-205ENST00000550376 OR56B4Q8NH76 319 aa18.33■□□□□ 0.52
PRDM4-205ENST00000550376 SEH1LQ96EE3 360 aa18.33■□□□□ 0.52
PRDM4-205ENST00000550376 ZNF486Q96H40 463 aaPredicted RBP18.33■□□□□ 0.52
PRDM4-205ENST00000550376 METTL17Q9H7H0 456 aaPredicted RBP18.33■□□□□ 0.52
PRDM4-205ENST00000550376 PIGLQ9Y2B2 252 aa18.33■□□□□ 0.52
PRDM4-205ENST00000550376 GABRA1P14867 456 aa18.32■□□□□ 0.52
PRDM4-205ENST00000550376 CXCL3P19876 107 aa18.32■□□□□ 0.52
PRDM4-205ENST00000550376 PSMB1P20618 241 aaKnown RBP18.32■□□□□ 0.52
PRDM4-205ENST00000550376 HTR5AP47898 357 aa18.32■□□□□ 0.52
PRDM4-205ENST00000550376 UBE2V2Q15819 145 aa18.32■□□□□ 0.52
PRDM4-205ENST00000550376 OR4C16Q8NGL9 310 aa18.32■□□□□ 0.52
PRDM4-205ENST00000550376 SCMH1Q96GD3 660 aa18.32■□□□□ 0.52
PRDM4-205ENST00000550376 GPER1Q99527 375 aa18.32■□□□□ 0.52
PRDM4-205ENST00000550376 SLC17A5Q9NRA2 495 aa18.32■□□□□ 0.52
PRDM4-205ENST00000550376 LCATP04180 440 aa18.32■□□□□ 0.52
PRDM4-205ENST00000550376 CCL2P13500 99 aa18.32■□□□□ 0.52
PRDM4-205ENST00000550376 OTX1P32242 354 aaPredicted RBP18.32■□□□□ 0.52
PRDM4-205ENST00000550376 SLC22A6Q4U2R8 563 aa18.32■□□□□ 0.52
PRDM4-205ENST00000550376 MEIOBQ8N635 442 aa18.32■□□□□ 0.52
PRDM4-205ENST00000550376 OR1F12Q8NHA8 337 aa18.32■□□□□ 0.52
PRDM4-205ENST00000550376 SYNGR4O95473 234 aa18.31■□□□□ 0.52
PRDM4-205ENST00000550376 ANXA7P20073 488 aaKnown RBP18.31■□□□□ 0.52
PRDM4-205ENST00000550376 AP3S2P59780 193 aa18.31■□□□□ 0.52
PRDM4-205ENST00000550376 QRFPP83859 136 aa18.31■□□□□ 0.52
PRDM4-205ENST00000550376 DNM1P46Q6ZS02 220 aa18.31■□□□□ 0.52
PRDM4-205ENST00000550376 OR11H7Q8NGC8 314 aa18.31■□□□□ 0.52
PRDM4-205ENST00000550376 PIGTQ969N2 578 aa18.31■□□□□ 0.52
PRDM4-205ENST00000550376 SPTSSAQ969W0 71 aa18.31■□□□□ 0.52
PRDM4-205ENST00000550376 WNT5BQ9H1J7 359 aa18.31■□□□□ 0.52
PRDM4-205ENST00000550376 MED28Q9H204 178 aa18.31■□□□□ 0.52
PRDM4-205ENST00000550376 C12orf49Q9H741 205 aa18.31■□□□□ 0.52
PRDM4-205ENST00000550376 NOX3Q9HBY0 568 aa18.31■□□□□ 0.52
PRDM4-205ENST00000550376 M0QYG6 137 aa18.31■□□□□ 0.52
PRDM4-205ENST00000550376 TRAPPC2P0DI81 140 aa18.31■□□□□ 0.52
PRDM4-205ENST00000550376 TRAPPC2BP0DI82 140 aa18.31■□□□□ 0.52
PRDM4-205ENST00000550376 GNB3P16520 340 aa18.31■□□□□ 0.52
PRDM4-205ENST00000550376 CCL1P22362 96 aa18.31■□□□□ 0.52
PRDM4-205ENST00000550376 CRYGSP22914 178 aa18.31■□□□□ 0.52
PRDM4-205ENST00000550376 ACKR3P25106 362 aa18.31■□□□□ 0.52
PRDM4-205ENST00000550376 RCVRNP35243 200 aa18.31■□□□□ 0.52
PRDM4-205ENST00000550376 RAD52P43351 418 aa18.31■□□□□ 0.52
PRDM4-205ENST00000550376 NOVA1P51513 510 aaKnown RBP18.31■□□□□ 0.52
PRDM4-205ENST00000550376 MRPS10P82664 201 aaKnown RBP18.31■□□□□ 0.52
PRDM4-205ENST00000550376 ARF1P84077 181 aaKnown RBP18.31■□□□□ 0.52
PRDM4-205ENST00000550376 ZFP62Q8NB50 900 aaPredicted RBP18.31■□□□□ 0.52
PRDM4-205ENST00000550376 OR4S1Q8NGB4 309 aa18.31■□□□□ 0.52
PRDM4-205ENST00000550376 OR10K1Q8NGX5 313 aa18.31■□□□□ 0.52
PRDM4-205ENST00000550376 FOXRED1Q96CU9 486 aaPredicted RBP18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms