RNA–Protein interactions for RNA: ENST00000548877.1

CDX2-202, Transcript of caudal type homeobox 2, humanhuman

TSL 3

Gene CDX2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-202ENST00000548877 GATAD2BQ8WXI9 593 aa11.22□□□□□ -0.61
CDX2-202ENST00000548877 SGTBQ96EQ0 304 aa11.22□□□□□ -0.61
CDX2-202ENST00000548877 APOL4Q9BPW4 351 aa11.22□□□□□ -0.61
CDX2-202ENST00000548877 POLR2J2Q9GZM3 115 aaKnown RBP11.22□□□□□ -0.61
CDX2-202ENST00000548877 FAM192AQ9GZU8 254 aa11.22□□□□□ -0.61
CDX2-202ENST00000548877 POLR2J3Q9H1A7 115 aaKnown RBP11.22□□□□□ -0.61
CDX2-202ENST00000548877 FAM118AQ9NWS6 357 aa11.22□□□□□ -0.61
CDX2-202ENST00000548877 BLOC1S6Q9UL45 172 aa11.22□□□□□ -0.61
CDX2-202ENST00000548877 HIF3AQ9Y2N7 669 aa11.22□□□□□ -0.61
CDX2-202ENST00000548877 IGHV1-69DA0A0B4J2H0 117 aa11.21□□□□□ -0.61
CDX2-202ENST00000548877 LOC100130705A0A1B0GUX0 176 aa11.21□□□□□ -0.61
CDX2-202ENST00000548877 LRRC30A6NM36 301 aa11.21□□□□□ -0.61
CDX2-202ENST00000548877 DIRAS1O95057 198 aa11.21□□□□□ -0.61
CDX2-202ENST00000548877 ZNF205O95201 554 aa11.21□□□□□ -0.61
CDX2-202ENST00000548877 IGHV1-69P01742 117 aa11.21□□□□□ -0.61
CDX2-202ENST00000548877 IGHV4-59P01825 116 aa11.21□□□□□ -0.61
CDX2-202ENST00000548877 OPN1MWP04001 364 aa11.21□□□□□ -0.61
CDX2-202ENST00000548877 H1F0P07305 194 aaKnown RBP11.21□□□□□ -0.61
CDX2-202ENST00000548877 SFTPBP07988 381 aa11.21□□□□□ -0.61
CDX2-202ENST00000548877 CSF1P09603 554 aa11.21□□□□□ -0.61
CDX2-202ENST00000548877 OPN1MW2P0DN77 364 aa11.21□□□□□ -0.61
CDX2-202ENST00000548877 OPN1MW3P0DN78 364 aa11.21□□□□□ -0.61
CDX2-202ENST00000548877 PMELP40967 661 aa11.21□□□□□ -0.61
CDX2-202ENST00000548877 OR1E2P47887 323 aa11.21□□□□□ -0.61
CDX2-202ENST00000548877 RPL27P61353 136 aaKnown RBP11.21□□□□□ -0.61
CDX2-202ENST00000548877 SCRN3Q0VDG4 424 aa11.21□□□□□ -0.61
CDX2-202ENST00000548877 LAPTM4AQ15012 233 aa11.21□□□□□ -0.61
CDX2-202ENST00000548877 CD276Q5ZPR3 534 aa11.21□□□□□ -0.61
CDX2-202ENST00000548877 LYPD2Q6UXB3 125 aa11.21□□□□□ -0.61
CDX2-202ENST00000548877 TMEM179BQ7Z7N9 219 aa11.21□□□□□ -0.61
CDX2-202ENST00000548877 OR10G2Q8NGC3 310 aa11.21□□□□□ -0.61
CDX2-202ENST00000548877 OR4C15Q8NGM1 316 aa11.21□□□□□ -0.61
CDX2-202ENST00000548877 PFN4Q8NHR9 129 aa11.21□□□□□ -0.61
CDX2-202ENST00000548877 Q8TCH9 128 aa11.21□□□□□ -0.61
CDX2-202ENST00000548877 DHRS1Q96LJ7 313 aa11.21□□□□□ -0.61
CDX2-202ENST00000548877 PCGF1Q9BSM1 259 aa11.21□□□□□ -0.61
CDX2-202ENST00000548877 ANKRD19PQ9H560 264 aa11.21□□□□□ -0.61
CDX2-202ENST00000548877 POLE4Q9NR33 117 aa11.21□□□□□ -0.61
CDX2-202ENST00000548877 C20orf141Q9NUB4 165 aa11.21□□□□□ -0.61
CDX2-202ENST00000548877 VNN3Q9NY84 501 aa11.21□□□□□ -0.61
CDX2-202ENST00000548877 A0A087WXM4 84 aa11.2□□□□□ -0.62
CDX2-202ENST00000548877 A0A1W2PRQ8 180 aa11.2□□□□□ -0.62
CDX2-202ENST00000548877 HTR3EA5X5Y0 456 aa11.2□□□□□ -0.62
CDX2-202ENST00000548877 A6NHS1 94 aa11.2□□□□□ -0.62
CDX2-202ENST00000548877 TOX4O94842 621 aa11.2□□□□□ -0.62
CDX2-202ENST00000548877 SCG5P05408 212 aa11.2□□□□□ -0.62
CDX2-202ENST00000548877 IFNGR2P38484 337 aa11.2□□□□□ -0.62
CDX2-202ENST00000548877 HTR5AP47898 357 aa11.2□□□□□ -0.62
CDX2-202ENST00000548877 DAPP51397 102 aa11.2□□□□□ -0.62
CDX2-202ENST00000548877 DGCR6Q14129 220 aa11.2□□□□□ -0.62
CDX2-202ENST00000548877 C11orf91Q3C1V1 193 aa11.2□□□□□ -0.62
CDX2-202ENST00000548877 RBM48Q5RL73 367 aaKnown RBP11.2□□□□□ -0.62
CDX2-202ENST00000548877 VASH1Q7L8A9 365 aaPredicted RBP11.2□□□□□ -0.62
CDX2-202ENST00000548877 NKAIN4Q8IVV8 208 aa11.2□□□□□ -0.62
CDX2-202ENST00000548877 CLDN22Q8N7P3 220 aa11.2□□□□□ -0.62
CDX2-202ENST00000548877 CELF2-AS1Q8N7Q2 184 aa11.2□□□□□ -0.62
CDX2-202ENST00000548877 LRRC75AQ8NAA5 344 aa11.2□□□□□ -0.62
CDX2-202ENST00000548877 ERGIC1Q969X5 290 aa11.2□□□□□ -0.62
CDX2-202ENST00000548877 RASD2Q96D21 266 aa11.2□□□□□ -0.62
CDX2-202ENST00000548877 PRRC1Q96M27 445 aa11.2□□□□□ -0.62
CDX2-202ENST00000548877 WDFY2Q96P53 400 aa11.2□□□□□ -0.62
CDX2-202ENST00000548877 FNDC11Q9BVV2 318 aa11.2□□□□□ -0.62
CDX2-202ENST00000548877 GABARAPL3Q9BY60 117 aa11.2□□□□□ -0.62
CDX2-202ENST00000548877 SIRPDQ9H106 197 aa11.2□□□□□ -0.62
CDX2-202ENST00000548877 DPAGT1Q9H3H5 408 aa11.2□□□□□ -0.62
CDX2-202ENST00000548877 PAPOLBQ9NRJ5 636 aaKnown RBP11.2□□□□□ -0.62
CDX2-202ENST00000548877 ATPIF1Q9UII2 106 aa11.2□□□□□ -0.62
CDX2-202ENST00000548877 OR6C6A6NF89 314 aa11.19□□□□□ -0.62
CDX2-202ENST00000548877 IQCF6A8MYZ5 107 aa11.19□□□□□ -0.62
CDX2-202ENST00000548877 MLNRO43193 412 aa11.19□□□□□ -0.62
CDX2-202ENST00000548877 SGCEO43556 437 aa11.19□□□□□ -0.62
CDX2-202ENST00000548877 DOK2O60496 412 aa11.19□□□□□ -0.62
CDX2-202ENST00000548877 TNFRSF1BP20333 461 aa11.19□□□□□ -0.62
CDX2-202ENST00000548877 PRKACGP22612 351 aa11.19□□□□□ -0.62
CDX2-202ENST00000548877 RPL5P46777 297 aaKnown RBP11.19□□□□□ -0.62
CDX2-202ENST00000548877 RGS6P49758 472 aa11.19□□□□□ -0.62
CDX2-202ENST00000548877 ZIK1Q3SY52 487 aaPredicted RBP11.19□□□□□ -0.62
CDX2-202ENST00000548877 ALG10Q5BKT4 473 aa11.19□□□□□ -0.62
CDX2-202ENST00000548877 FAM201AQ5SY85 155 aa11.19□□□□□ -0.62
CDX2-202ENST00000548877 TSEN54Q7Z6J9 526 aaKnown RBP11.19□□□□□ -0.62
CDX2-202ENST00000548877 MOGAT3Q86VF5 341 aa11.19□□□□□ -0.62
CDX2-202ENST00000548877 OFCC1Q8IZS5 231 aa11.19□□□□□ -0.62
CDX2-202ENST00000548877 HS3ST5Q8IZT8 346 aa11.19□□□□□ -0.62
CDX2-202ENST00000548877 TSPAN14Q8NG11 270 aa11.19□□□□□ -0.62
CDX2-202ENST00000548877 OR10AD1Q8NGE0 317 aa11.19□□□□□ -0.62
CDX2-202ENST00000548877 TMEM255BQ8WV15 326 aa11.19□□□□□ -0.62
CDX2-202ENST00000548877 TMEM239Q8WW34 195 aa11.19□□□□□ -0.62
CDX2-202ENST00000548877 PPP1R14AQ96A00 147 aa11.19□□□□□ -0.62
CDX2-202ENST00000548877 MBOAT4Q96T53 435 aa11.19□□□□□ -0.62
CDX2-202ENST00000548877 RIBC2Q9H4K1 309 aa11.19□□□□□ -0.62
CDX2-202ENST00000548877 NMNAT1Q9HAN9 279 aaPredicted RBP11.19□□□□□ -0.62
CDX2-202ENST00000548877 VCX3AQ9NNX9 186 aa11.19□□□□□ -0.62
CDX2-202ENST00000548877 NOTCH3Q9UM47 2321 aa11.19□□□□□ -0.62
CDX2-202ENST00000548877 A0A0U1RQK1 487 aa11.18□□□□□ -0.62
CDX2-202ENST00000548877 SMIM31A0A1B0GVY4 71 aa11.18□□□□□ -0.62
CDX2-202ENST00000548877 A0A1W2PPL8 197 aa11.18□□□□□ -0.62
CDX2-202ENST00000548877 A6NIZ1 184 aa11.18□□□□□ -0.62
CDX2-202ENST00000548877 OR5F1O95221 314 aa11.18□□□□□ -0.62
CDX2-202ENST00000548877 GNAO1P09471 354 aa11.18□□□□□ -0.62
CDX2-202ENST00000548877 FUT4P22083 530 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms