RNA–Protein interactions for RNA: ENST00000548860.5

CACNB3-209, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 4,029 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-209ENST00000548860 GABRA1P14867 456 aa12.64□□□□□ -0.39
CACNB3-209ENST00000548860 NME1P15531 152 aaKnown RBP12.64□□□□□ -0.39
CACNB3-209ENST00000548860 IAH1Q2TAA2 248 aaPredicted RBP12.64□□□□□ -0.39
CACNB3-209ENST00000548860 OR5L2Q8NGL0 311 aa12.64□□□□□ -0.39
CACNB3-209ENST00000548860 ALKBH3Q96Q83 286 aaPredicted RBP12.64□□□□□ -0.39
CACNB3-209ENST00000548860 MRI1Q9BV20 369 aa12.64□□□□□ -0.39
CACNB3-209ENST00000548860 PIGLQ9Y2B2 252 aa12.64□□□□□ -0.39
CACNB3-209ENST00000548860 SNTB1Q13884 538 aaKnown RBP12.64□□□□□ -0.39
CACNB3-209ENST00000548860 ATRAIDQ6UW56 229 aa12.64□□□□□ -0.39
CACNB3-209ENST00000548860 KLK13Q9UKR3 277 aa12.64□□□□□ -0.39
CACNB3-209ENST00000548860 RAMP1O60894 148 aa12.63□□□□□ -0.39
CACNB3-209ENST00000548860 IL10RAQ13651 578 aa12.63□□□□□ -0.39
CACNB3-209ENST00000548860 CLINT1Q14677 625 aa12.63□□□□□ -0.39
CACNB3-209ENST00000548860 OGFOD3Q6PK18 319 aa12.63□□□□□ -0.39
CACNB3-209ENST00000548860 CDH26Q8IXH8 852 aa12.63□□□□□ -0.39
CACNB3-209ENST00000548860 OR5L1Q8NGL2 311 aa12.63□□□□□ -0.39
CACNB3-209ENST00000548860 AKR7LQ8NHP1 331 aa12.63□□□□□ -0.39
CACNB3-209ENST00000548860 HDHD3Q9BSH5 251 aaPredicted RBP12.63□□□□□ -0.39
CACNB3-209ENST00000548860 PCNX1Q96RV3 2341 aa12.63□□□□□ -0.39
CACNB3-209ENST00000548860 KIAA1671Q9BY89 1806 aa12.63□□□□□ -0.39
CACNB3-209ENST00000548860 DDAH2O95865 285 aa12.63□□□□□ -0.39
CACNB3-209ENST00000548860 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.63□□□□□ -0.39
CACNB3-209ENST00000548860 TMPPEQ6ZT21 453 aa12.63□□□□□ -0.39
CACNB3-209ENST00000548860 C6orf201Q7Z4U5 140 aa12.63□□□□□ -0.39
CACNB3-209ENST00000548860 BPIFCQ8NFQ6 507 aa12.63□□□□□ -0.39
CACNB3-209ENST00000548860 ZNF721Q8TF20 911 aa12.63□□□□□ -0.39
CACNB3-209ENST00000548860 SLC25A21Q9BQT8 299 aaPredicted RBP12.63□□□□□ -0.39
CACNB3-209ENST00000548860 RAB22AQ9UL26 194 aa12.63□□□□□ -0.39
CACNB3-209ENST00000548860 PCDHB10Q9UN67 800 aa12.63□□□□□ -0.39
CACNB3-209ENST00000548860 MMACHCQ9Y4U1 282 aa12.63□□□□□ -0.39
CACNB3-209ENST00000548860 PIAS2O75928 621 aa12.63□□□□□ -0.39
CACNB3-209ENST00000548860 TIAF1O95411 115 aa12.63□□□□□ -0.39
CACNB3-209ENST00000548860 GNRHRP30968 328 aa12.63□□□□□ -0.39
CACNB3-209ENST00000548860 DCDP81605 110 aaKnown RBP12.63□□□□□ -0.39
CACNB3-209ENST00000548860 CLVS2Q5SYC1 327 aa12.63□□□□□ -0.39
CACNB3-209ENST00000548860 H3F3CQ6NXT2 135 aa12.63□□□□□ -0.39
CACNB3-209ENST00000548860 FAM122BQ7Z309 247 aa12.63□□□□□ -0.39
CACNB3-209ENST00000548860 CBLN2Q8IUK8 224 aa12.63□□□□□ -0.39
CACNB3-209ENST00000548860 IL1F10Q8WWZ1 152 aa12.63□□□□□ -0.39
CACNB3-209ENST00000548860 REEP6Q96HR9 211 aa12.63□□□□□ -0.39
CACNB3-209ENST00000548860 GPHA2Q96T91 129 aa12.63□□□□□ -0.39
CACNB3-209ENST00000548860 EVA1AQ9H8M9 152 aa12.63□□□□□ -0.39
CACNB3-209ENST00000548860 RPS10P5Q9NQ39 176 aa12.63□□□□□ -0.39
CACNB3-209ENST00000548860 KIAA2026Q5HYC2 2103 aa12.63□□□□□ -0.39
CACNB3-209ENST00000548860 MYO7BQ6PIF6 2116 aa12.63□□□□□ -0.39
CACNB3-209ENST00000548860 A0A096LPE4 126 aa12.62□□□□□ -0.39
CACNB3-209ENST00000548860 A0A1W2PPZ6 126 aa12.62□□□□□ -0.39
CACNB3-209ENST00000548860 SNRPGP15A8MWD9 76 aa12.62□□□□□ -0.39
CACNB3-209ENST00000548860 EIF4E2O60573 245 aaKnown RBP12.62□□□□□ -0.39
CACNB3-209ENST00000548860 MT-ATP6P00846 226 aa12.62□□□□□ -0.39
CACNB3-209ENST00000548860 CD80P33681 288 aa12.62□□□□□ -0.39
CACNB3-209ENST00000548860 CXCL12P48061 93 aa12.62□□□□□ -0.39
CACNB3-209ENST00000548860 AFF3P51826 1226 aaKnown RBP12.62□□□□□ -0.39
CACNB3-209ENST00000548860 OR2W3Q7Z3T1 314 aa12.62□□□□□ -0.39
CACNB3-209ENST00000548860 PAPOLGQ9BWT3 736 aaKnown RBP12.62□□□□□ -0.39
CACNB3-209ENST00000548860 PIPOXQ9P0Z9 390 aa12.62□□□□□ -0.39
CACNB3-209ENST00000548860 ALG1L2C9J202 215 aa12.62□□□□□ -0.39
CACNB3-209ENST00000548860 TP53I11O14683 189 aa12.62□□□□□ -0.39
CACNB3-209ENST00000548860 BGLAPP02818 100 aa12.62□□□□□ -0.39
CACNB3-209ENST00000548860 DCAF7P61962 342 aa12.62□□□□□ -0.39
CACNB3-209ENST00000548860 MEF2DQ14814 521 aa12.62□□□□□ -0.39
CACNB3-209ENST00000548860 SULF2Q8IWU5 870 aa12.62□□□□□ -0.39
CACNB3-209ENST00000548860 UCN2Q96RP3 112 aa12.62□□□□□ -0.39
CACNB3-209ENST00000548860 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.62□□□□□ -0.39
CACNB3-209ENST00000548860 VSIG4Q9Y279 399 aa12.62□□□□□ -0.39
CACNB3-209ENST00000548860 ZNF407Q9C0G0 2248 aa12.62□□□□□ -0.39
CACNB3-209ENST00000548860 CNOT4O95628 575 aaKnown RBP12.62□□□□□ -0.39
CACNB3-209ENST00000548860 CCL2P13500 99 aa12.62□□□□□ -0.39
CACNB3-209ENST00000548860 NAGAP17050 411 aa12.62□□□□□ -0.39
CACNB3-209ENST00000548860 RPS18P62269 152 aaKnown RBP12.62□□□□□ -0.39
CACNB3-209ENST00000548860 ACY1Q03154 408 aa12.62□□□□□ -0.39
CACNB3-209ENST00000548860 TMEM217Q8N7C4 229 aa12.62□□□□□ -0.39
CACNB3-209ENST00000548860 SLC38A9Q8NBW4 561 aa12.62□□□□□ -0.39
CACNB3-209ENST00000548860 SLC25A28Q96A46 364 aa12.62□□□□□ -0.39
CACNB3-209ENST00000548860 GSTZ1O43708 216 aaPredicted RBP12.61□□□□□ -0.39
CACNB3-209ENST00000548860 RD3LP0DJH9 198 aa12.61□□□□□ -0.39
CACNB3-209ENST00000548860 NME2P1O60361 137 aa12.61□□□□□ -0.39
CACNB3-209ENST00000548860 MTRF1O75570 445 aaKnown RBP12.61□□□□□ -0.39
CACNB3-209ENST00000548860 PNLIPRP2P54317 469 aa12.61□□□□□ -0.39
CACNB3-209ENST00000548860 HERV-K104P61576 105 aa12.61□□□□□ -0.39
CACNB3-209ENST00000548860 EMC4Q5J8M3 183 aa12.61□□□□□ -0.39
CACNB3-209ENST00000548860 NUBPLQ8TB37 319 aa12.61□□□□□ -0.39
CACNB3-209ENST00000548860 BORCS8Q96FH0 119 aa12.61□□□□□ -0.39
CACNB3-209ENST00000548860 OR10A2Q9H208 303 aa12.61□□□□□ -0.39
CACNB3-209ENST00000548860 LANCL2Q9NS86 450 aa12.61□□□□□ -0.39
CACNB3-209ENST00000548860 FAM74A7A6NL05 159 aa12.61□□□□□ -0.39
CACNB3-209ENST00000548860 FAM74A3Q4VXF1 159 aa12.61□□□□□ -0.39
CACNB3-209ENST00000548860 THRSPQ92748 146 aa12.61□□□□□ -0.39
CACNB3-209ENST00000548860 NECAB3Q96P71 396 aaPredicted RBP12.61□□□□□ -0.39
CACNB3-209ENST00000548860 GAREM1Q9H706 876 aa12.61□□□□□ -0.39
CACNB3-209ENST00000548860 KCNK7Q9Y2U2 307 aa12.61□□□□□ -0.39
CACNB3-209ENST00000548860 PLSCR5A0PG75 271 aa12.6□□□□□ -0.39
CACNB3-209ENST00000548860 KRBOX1C9JBD0 128 aa12.6□□□□□ -0.39
CACNB3-209ENST00000548860 VSIG8P0DPA2 414 aa12.6□□□□□ -0.39
CACNB3-209ENST00000548860 TPT1P13693 172 aaKnown RBP12.6□□□□□ -0.39
CACNB3-209ENST00000548860 B4GALT1P15291 398 aa12.6□□□□□ -0.39
CACNB3-209ENST00000548860 PSMB6P28072 239 aa12.6□□□□□ -0.39
CACNB3-209ENST00000548860 HTR5AP47898 357 aa12.6□□□□□ -0.39
CACNB3-209ENST00000548860 CCL7P80098 99 aa12.6□□□□□ -0.39
CACNB3-209ENST00000548860 TAGLNQ01995 201 aaKnown RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 123.4 ms