RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 TOR3AQ9H497 397 aa13.3□□□□□ -0.28
DDX54-205ENST00000548786 TMEM160Q9NX00 188 aa13.3□□□□□ -0.28
DDX54-205ENST00000548786 ZNF319Q9P2F9 582 aa13.3□□□□□ -0.28
DDX54-205ENST00000548786 PCDHB10Q9UN67 800 aa13.3□□□□□ -0.28
DDX54-205ENST00000548786 ATRQ13535 2644 aa13.3□□□□□ -0.28
DDX54-205ENST00000548786 XRCC2O43543 280 aa13.29□□□□□ -0.28
DDX54-205ENST00000548786 IGHV2-70P01814 119 aa13.29□□□□□ -0.28
DDX54-205ENST00000548786 FAM157CP0CG43 387 aa13.29□□□□□ -0.28
DDX54-205ENST00000548786 DVL1P1P54792 670 aaPredicted RBP13.29□□□□□ -0.28
DDX54-205ENST00000548786 BTG1P62324 171 aa13.29□□□□□ -0.28
DDX54-205ENST00000548786 LCN2P80188 198 aa13.29□□□□□ -0.28
DDX54-205ENST00000548786 MAB21L1Q13394 359 aa13.29□□□□□ -0.28
DDX54-205ENST00000548786 C12orf73Q69YU5 71 aa13.29□□□□□ -0.28
DDX54-205ENST00000548786 FAHD2BQ6P2I3 314 aaPredicted RBP13.29□□□□□ -0.28
DDX54-205ENST00000548786 SLC16A9Q7RTY1 509 aa13.29□□□□□ -0.28
DDX54-205ENST00000548786 KRT77Q7Z794 578 aa13.29□□□□□ -0.28
DDX54-205ENST00000548786 RFLNBQ8N5W9 214 aa13.29□□□□□ -0.28
DDX54-205ENST00000548786 TMEM163Q8TC26 289 aa13.29□□□□□ -0.28
DDX54-205ENST00000548786 FAHD2AQ96GK7 314 aa13.29□□□□□ -0.28
DDX54-205ENST00000548786 CNN2Q99439 309 aaKnown RBP13.29□□□□□ -0.28
DDX54-205ENST00000548786 LPAR3Q9UBY5 353 aa13.29□□□□□ -0.28
DDX54-205ENST00000548786 LRP12Q9Y561 859 aa13.29□□□□□ -0.28
DDX54-205ENST00000548786 FBN1P35555 2871 aaKnown RBP13.28□□□□□ -0.28
DDX54-205ENST00000548786 PRR32B1ATL7 298 aa13.28□□□□□ -0.28
DDX54-205ENST00000548786 TMEM178BH3BS89 294 aa13.28□□□□□ -0.28
DDX54-205ENST00000548786 PLPP2O43688 288 aa13.28□□□□□ -0.28
DDX54-205ENST00000548786 ALOX5APP20292 161 aa13.28□□□□□ -0.28
DDX54-205ENST00000548786 SRP14P37108 136 aaKnown RBP13.28□□□□□ -0.28
DDX54-205ENST00000548786 PMELP40967 661 aa13.28□□□□□ -0.28
DDX54-205ENST00000548786 MPPED2Q15777 294 aa13.28□□□□□ -0.28
DDX54-205ENST00000548786 BOLLQ8N9W6 283 aaKnown RBP13.28□□□□□ -0.28
DDX54-205ENST00000548786 C19orf18Q8NEA5 215 aa13.28□□□□□ -0.28
DDX54-205ENST00000548786 SGK3Q96BR1 496 aa13.28□□□□□ -0.28
DDX54-205ENST00000548786 OSBPL10Q9BXB5 764 aa13.28□□□□□ -0.28
DDX54-205ENST00000548786 OR10A2Q9H208 303 aa13.28□□□□□ -0.28
DDX54-205ENST00000548786 PPP1R3EQ9H7J1 279 aa13.28□□□□□ -0.28
DDX54-205ENST00000548786 H2AFY2Q9P0M6 372 aaPredicted RBP13.28□□□□□ -0.28
DDX54-205ENST00000548786 ENOPH1Q9UHY7 261 aa13.28□□□□□ -0.28
DDX54-205ENST00000548786 COPS3Q9UNS2 423 aa13.28□□□□□ -0.28
DDX54-205ENST00000548786 EI24O14681 340 aa13.27□□□□□ -0.29
DDX54-205ENST00000548786 MAGEB4O15481 346 aaPredicted RBP13.27□□□□□ -0.29
DDX54-205ENST00000548786 APOL3O95236 402 aa13.27□□□□□ -0.29
DDX54-205ENST00000548786 APOC1P02654 83 aa13.27□□□□□ -0.29
DDX54-205ENST00000548786 SEC61A1P61619 476 aaKnown RBP13.27□□□□□ -0.29
DDX54-205ENST00000548786 FAM3AP98173 230 aa13.27□□□□□ -0.29
DDX54-205ENST00000548786 SRSF2Q01130 221 aaKnown RBP13.27□□□□□ -0.29
DDX54-205ENST00000548786 ZIK1Q3SY52 487 aaPredicted RBP13.27□□□□□ -0.29
DDX54-205ENST00000548786 MEPCEQ7L2J0 689 aaKnown RBP13.27□□□□□ -0.29
DDX54-205ENST00000548786 PRSS45Q7RTY3 260 aa13.27□□□□□ -0.29
DDX54-205ENST00000548786 RBM4BQ9BQ04 359 aaKnown RBP13.27□□□□□ -0.29
DDX54-205ENST00000548786 GABARAPL3Q9BY60 117 aa13.27□□□□□ -0.29
DDX54-205ENST00000548786 YIPF3Q9GZM5 350 aa13.27□□□□□ -0.29
DDX54-205ENST00000548786 IKZF2Q9UKS7 526 aa13.27□□□□□ -0.29
DDX54-205ENST00000548786 A0A1B0GWJ7 208 aa13.26□□□□□ -0.29
DDX54-205ENST00000548786 LRRC30A6NM36 301 aa13.26□□□□□ -0.29
DDX54-205ENST00000548786 ANKRD30BLA7E2S9 258 aa13.26□□□□□ -0.29
DDX54-205ENST00000548786 FAM20BO75063 409 aa13.26□□□□□ -0.29
DDX54-205ENST00000548786 IFNA2P01563 188 aa13.26□□□□□ -0.29
DDX54-205ENST00000548786 GRPP07492 148 aa13.26□□□□□ -0.29
DDX54-205ENST00000548786 CD200P41217 278 aa13.26□□□□□ -0.29
DDX54-205ENST00000548786 GSK3AP49840 483 aa13.26□□□□□ -0.29
DDX54-205ENST00000548786 PSMA6P60900 246 aaKnown RBP13.26□□□□□ -0.29
DDX54-205ENST00000548786 AADACL4Q5VUY2 407 aa13.26□□□□□ -0.29
DDX54-205ENST00000548786 ZFP1Q6P2D0 407 aa13.26□□□□□ -0.29
DDX54-205ENST00000548786 SLC35F2Q8IXU6 374 aa13.26□□□□□ -0.29
DDX54-205ENST00000548786 KLHL36Q8N4N3 616 aa13.26□□□□□ -0.29
DDX54-205ENST00000548786 SPICQ8N5J4 248 aa13.26□□□□□ -0.29
DDX54-205ENST00000548786 OR8B12Q8NGG6 310 aa13.26□□□□□ -0.29
DDX54-205ENST00000548786 OR52H1Q8NGJ2 320 aa13.26□□□□□ -0.29
DDX54-205ENST00000548786 OR51G2Q8NGK0 314 aa13.26□□□□□ -0.29
DDX54-205ENST00000548786 SPSB4Q96A44 273 aa13.26□□□□□ -0.29
DDX54-205ENST00000548786 TBX5Q99593 518 aa13.26□□□□□ -0.29
DDX54-205ENST00000548786 OPA3Q9H6K4 179 aa13.26□□□□□ -0.29
DDX54-205ENST00000548786 SP140LQ9H930 580 aa13.26□□□□□ -0.29
DDX54-205ENST00000548786 MRPL15Q9P015 296 aaKnown RBP13.26□□□□□ -0.29
DDX54-205ENST00000548786 GTF2A1LQ9UNN4 478 aa13.26□□□□□ -0.29
DDX54-205ENST00000548786 TRAV20A0A0B4J274 112 aa13.25□□□□□ -0.29
DDX54-205ENST00000548786 hCG_38984A0A1B0GV85 526 aa13.25□□□□□ -0.29
DDX54-205ENST00000548786 A6NLC8 198 aa13.25□□□□□ -0.29
DDX54-205ENST00000548786 IRF2P14316 349 aa13.25□□□□□ -0.29
DDX54-205ENST00000548786 ANPEPP15144 967 aa13.25□□□□□ -0.29
DDX54-205ENST00000548786 ZFP36P26651 326 aaKnown RBP13.25□□□□□ -0.29
DDX54-205ENST00000548786 MDH2P40926 338 aaKnown RBP13.25□□□□□ -0.29
DDX54-205ENST00000548786 EFNB1P98172 346 aa13.25□□□□□ -0.29
DDX54-205ENST00000548786 NXNL2Q5VZ03 156 aa13.25□□□□□ -0.29
DDX54-205ENST00000548786 KCTD18Q6PI47 426 aaPredicted RBP13.25□□□□□ -0.29
DDX54-205ENST00000548786 PLEKHG7Q6ZR37 379 aa13.25□□□□□ -0.29
DDX54-205ENST00000548786 ZNF826PQ6ZT77 177 aa13.25□□□□□ -0.29
DDX54-205ENST00000548786 LRRC28Q86X40 367 aaPredicted RBP13.25□□□□□ -0.29
DDX54-205ENST00000548786 COMMD2Q86X83 199 aa13.25□□□□□ -0.29
DDX54-205ENST00000548786 CBR4Q8N4T8 237 aa13.25□□□□□ -0.29
DDX54-205ENST00000548786 DEFB108BQ8NET1 73 aa13.25□□□□□ -0.29
DDX54-205ENST00000548786 OR11L1Q8NGX0 322 aa13.25□□□□□ -0.29
DDX54-205ENST00000548786 OR8S1Q8NH09 359 aa13.25□□□□□ -0.29
DDX54-205ENST00000548786 FAM81AQ8TBF8 368 aa13.25□□□□□ -0.29
DDX54-205ENST00000548786 LYZL4Q96KX0 146 aa13.25□□□□□ -0.29
DDX54-205ENST00000548786 RAB3IPQ96QF0 476 aaPredicted RBP13.25□□□□□ -0.29
DDX54-205ENST00000548786 MDFIQ99750 246 aa13.25□□□□□ -0.29
DDX54-205ENST00000548786 APOL4Q9BPW4 351 aa13.25□□□□□ -0.29
DDX54-205ENST00000548786 PAPOLGQ9BWT3 736 aaKnown RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms