RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 CTSZQ9UBR2 303 aa11.11□□□□□ -0.63
CPSF6-204ENST00000547486 SAMHD1Q9Y3Z3 626 aaKnown RBP11.11□□□□□ -0.63
CPSF6-204ENST00000547486 PCDHGB1Q9Y5G3 927 aa11.11□□□□□ -0.63
CPSF6-204ENST00000547486 MDFIC2A0A1B0GVS7 189 aa11.1□□□□□ -0.63
CPSF6-204ENST00000547486 FCN3O75636 299 aa11.1□□□□□ -0.63
CPSF6-204ENST00000547486 GRPP07492 148 aa11.1□□□□□ -0.63
CPSF6-204ENST00000547486 FMO3P31513 532 aa11.1□□□□□ -0.63
CPSF6-204ENST00000547486 FGF12P61328 243 aa11.1□□□□□ -0.63
CPSF6-204ENST00000547486 OR2T5Q6IEZ7 315 aa11.1□□□□□ -0.63
CPSF6-204ENST00000547486 ZNF826PQ6ZT77 177 aa11.1□□□□□ -0.63
CPSF6-204ENST00000547486 NLRC3Q7RTR2 1065 aa11.1□□□□□ -0.63
CPSF6-204ENST00000547486 OR2T33Q8NG76 320 aa11.1□□□□□ -0.63
CPSF6-204ENST00000547486 OR2T29Q8NH02 315 aa11.1□□□□□ -0.63
CPSF6-204ENST00000547486 SGK3Q96BR1 496 aa11.1□□□□□ -0.63
CPSF6-204ENST00000547486 ADAT1Q9BUB4 502 aaKnown RBP11.1□□□□□ -0.63
CPSF6-204ENST00000547486 SLC22A4Q9H015 551 aa11.1□□□□□ -0.63
CPSF6-204ENST00000547486 RASSF4Q9H2L5 321 aa11.1□□□□□ -0.63
CPSF6-204ENST00000547486 PPP1R3EQ9H7J1 279 aa11.1□□□□□ -0.63
CPSF6-204ENST00000547486 REEP1Q9H902 201 aa11.1□□□□□ -0.63
CPSF6-204ENST00000547486 MED20Q9H944 212 aa11.1□□□□□ -0.63
CPSF6-204ENST00000547486 FN3KRPQ9HA64 309 aa11.1□□□□□ -0.63
CPSF6-204ENST00000547486 C1orf123Q9NWV4 160 aa11.1□□□□□ -0.63
CPSF6-204ENST00000547486 MRPL15Q9P015 296 aaKnown RBP11.1□□□□□ -0.63
CPSF6-204ENST00000547486 CLN8Q9UBY8 286 aa11.1□□□□□ -0.63
CPSF6-204ENST00000547486 TRAV40A0A0B4J280 105 aa11.09□□□□□ -0.63
CPSF6-204ENST00000547486 DHRS12A0PJE2 317 aa11.09□□□□□ -0.63
CPSF6-204ENST00000547486 FAM183AA6NL82 134 aa11.09□□□□□ -0.63
CPSF6-204ENST00000547486 C3orf80F5H4A9 247 aa11.09□□□□□ -0.63
CPSF6-204ENST00000547486 LGALS8O00214 317 aa11.09□□□□□ -0.63
CPSF6-204ENST00000547486 PHYHO14832 338 aa11.09□□□□□ -0.63
CPSF6-204ENST00000547486 SPRY1O43609 319 aaPredicted RBP11.09□□□□□ -0.63
CPSF6-204ENST00000547486 RNASE1P07998 156 aaKnown RBP11.09□□□□□ -0.63
CPSF6-204ENST00000547486 POU4F2Q12837 409 aa11.09□□□□□ -0.63
CPSF6-204ENST00000547486 TAF13Q15543 124 aa11.09□□□□□ -0.63
CPSF6-204ENST00000547486 BRD3OSQ6XYD6 125 aa11.09□□□□□ -0.63
CPSF6-204ENST00000547486 PRSS45Q7RTY3 260 aa11.09□□□□□ -0.63
CPSF6-204ENST00000547486 C11orf53Q8IXP5 236 aa11.09□□□□□ -0.63
CPSF6-204ENST00000547486 ARHGAP24Q8N264 748 aa11.09□□□□□ -0.63
CPSF6-204ENST00000547486 IQCF1Q8N6M8 205 aa11.09□□□□□ -0.63
CPSF6-204ENST00000547486 PLPP7Q8NBV4 271 aa11.09□□□□□ -0.63
CPSF6-204ENST00000547486 OR56B2PQ8NGI1 322 aa11.09□□□□□ -0.63
CPSF6-204ENST00000547486 OR6K6Q8NGW6 343 aa11.09□□□□□ -0.63
CPSF6-204ENST00000547486 SGMS2Q8NHU3 365 aa11.09□□□□□ -0.63
CPSF6-204ENST00000547486 SPSB4Q96A44 273 aa11.09□□□□□ -0.63
CPSF6-204ENST00000547486 CLPTM1LQ96KA5 538 aa11.09□□□□□ -0.63
CPSF6-204ENST00000547486 AMELYQ99218 206 aa11.09□□□□□ -0.63
CPSF6-204ENST00000547486 FEVQ99581 238 aa11.09□□□□□ -0.63
CPSF6-204ENST00000547486 ZNF747Q9BV97 191 aa11.09□□□□□ -0.63
CPSF6-204ENST00000547486 ZNF319Q9P2F9 582 aa11.09□□□□□ -0.63
CPSF6-204ENST00000547486 BAIAP2Q9UQB8 552 aa11.09□□□□□ -0.63
CPSF6-204ENST00000547486 ZNF878C9JN71 531 aa11.08□□□□□ -0.64
CPSF6-204ENST00000547486 CLDN34H7C241 214 aa11.08□□□□□ -0.64
CPSF6-204ENST00000547486 ACOT8O14734 319 aa11.08□□□□□ -0.64
CPSF6-204ENST00000547486 LHBP01229 141 aa11.08□□□□□ -0.64
CPSF6-204ENST00000547486 SFTPBP07988 381 aa11.08□□□□□ -0.64
CPSF6-204ENST00000547486 FAM3AP98173 230 aa11.08□□□□□ -0.64
CPSF6-204ENST00000547486 FOXL1Q12952 345 aa11.08□□□□□ -0.64
CPSF6-204ENST00000547486 EIF2B1Q14232 305 aaKnown RBP11.08□□□□□ -0.64
CPSF6-204ENST00000547486 DEFB112Q30KQ8 113 aa11.08□□□□□ -0.64
CPSF6-204ENST00000547486 FAM98BQ52LJ0 330 aaKnown RBP11.08□□□□□ -0.64
CPSF6-204ENST00000547486 CD300LDQ6UXZ3 194 aa11.08□□□□□ -0.64
CPSF6-204ENST00000547486 SLC16A9Q7RTY1 509 aa11.08□□□□□ -0.64
CPSF6-204ENST00000547486 DPY19L4Q7Z388 723 aa11.08□□□□□ -0.64
CPSF6-204ENST00000547486 TMEM179BQ7Z7N9 219 aa11.08□□□□□ -0.64
CPSF6-204ENST00000547486 WDR86Q86TI4 376 aa11.08□□□□□ -0.64
CPSF6-204ENST00000547486 OR10G2Q8NGC3 310 aa11.08□□□□□ -0.64
CPSF6-204ENST00000547486 ZMYND19Q96E35 227 aaPredicted RBP11.08□□□□□ -0.64
CPSF6-204ENST00000547486 ABHD6Q9BV23 337 aa11.08□□□□□ -0.64
CPSF6-204ENST00000547486 CHID1Q9BWS9 393 aa11.08□□□□□ -0.64
CPSF6-204ENST00000547486 MMADHCQ9H3L0 296 aaPredicted RBP11.08□□□□□ -0.64
CPSF6-204ENST00000547486 MUC13Q9H3R2 512 aa11.08□□□□□ -0.64
CPSF6-204ENST00000547486 SMURF1Q9HCE7 757 aa11.08□□□□□ -0.64
CPSF6-204ENST00000547486 CMC2Q9NRP2 79 aa11.08□□□□□ -0.64
CPSF6-204ENST00000547486 NOP16Q9Y3C1 178 aaKnown RBP11.08□□□□□ -0.64
CPSF6-204ENST00000547486 OOEPA6NGQ2 149 aa11.07□□□□□ -0.64
CPSF6-204ENST00000547486 RIIAD1A6NNX1 92 aa11.07□□□□□ -0.64
CPSF6-204ENST00000547486 TBX1O43435 398 aa11.07□□□□□ -0.64
CPSF6-204ENST00000547486 IFNGP01579 166 aa11.07□□□□□ -0.64
CPSF6-204ENST00000547486 GYPAP02724 150 aa11.07□□□□□ -0.64
CPSF6-204ENST00000547486 GSTT1P30711 240 aa11.07□□□□□ -0.64
CPSF6-204ENST00000547486 MTNR1AP48039 350 aa11.07□□□□□ -0.64
CPSF6-204ENST00000547486 CX3CR1P49238 355 aa11.07□□□□□ -0.64
CPSF6-204ENST00000547486 ELF3P78545 371 aaPredicted RBP11.07□□□□□ -0.64
CPSF6-204ENST00000547486 OR8B8Q15620 311 aa11.07□□□□□ -0.64
CPSF6-204ENST00000547486 KLHL12Q53G59 568 aa11.07□□□□□ -0.64
CPSF6-204ENST00000547486 FAM90A1Q86YD7 464 aa11.07□□□□□ -0.64
CPSF6-204ENST00000547486 GCSAMQ8N6F7 178 aa11.07□□□□□ -0.64
CPSF6-204ENST00000547486 SPERTQ8NA61 448 aa11.07□□□□□ -0.64
CPSF6-204ENST00000547486 RNF133Q8WVZ7 376 aa11.07□□□□□ -0.64
CPSF6-204ENST00000547486 SLC25A28Q96A46 364 aa11.07□□□□□ -0.64
CPSF6-204ENST00000547486 TECTBQ96PL2 329 aa11.07□□□□□ -0.64
CPSF6-204ENST00000547486 PRDM13Q9H4Q3 707 aa11.07□□□□□ -0.64
CPSF6-204ENST00000547486 MARCH7Q9H992 704 aa11.07□□□□□ -0.64
CPSF6-204ENST00000547486 ZMAT3Q9HA38 289 aaKnown RBP11.07□□□□□ -0.64
CPSF6-204ENST00000547486 TAS2R1Q9NYW7 299 aa11.07□□□□□ -0.64
CPSF6-204ENST00000547486 ERVK-18Q9QC07 812 aa11.07□□□□□ -0.64
CPSF6-204ENST00000547486 IGHV3OR15-7A0A075B7D8 119 aa11.06□□□□□ -0.64
CPSF6-204ENST00000547486 TRAV38-1A0A0B4J264 116 aa11.06□□□□□ -0.64
CPSF6-204ENST00000547486 A6NLC8 198 aa11.06□□□□□ -0.64
CPSF6-204ENST00000547486 TMPRSS2O15393 492 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms