RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 CEACAM16Q2WEN9 425 aa11.21□□□□□ -0.61
SCAF11-209ENST00000547018 C1QL2Q7Z5L3 287 aa11.21□□□□□ -0.61
SCAF11-209ENST00000547018 FJX1Q86VR8 437 aa11.21□□□□□ -0.61
SCAF11-209ENST00000547018 BPIFB2Q8N4F0 458 aa11.21□□□□□ -0.61
SCAF11-209ENST00000547018 FADS6Q8N9I5 356 aa11.21□□□□□ -0.61
SCAF11-209ENST00000547018 DEFB124Q8NES8 71 aa11.21□□□□□ -0.61
SCAF11-209ENST00000547018 OIT3Q8WWZ8 545 aa11.21□□□□□ -0.61
SCAF11-209ENST00000547018 OR2M2Q96R28 347 aa11.21□□□□□ -0.61
SCAF11-209ENST00000547018 TAAR9Q96RI9 348 aa11.21□□□□□ -0.61
SCAF11-209ENST00000547018 NAA11Q9BSU3 229 aaPredicted RBP11.21□□□□□ -0.61
SCAF11-209ENST00000547018 PIGLQ9Y2B2 252 aa11.21□□□□□ -0.61
SCAF11-209ENST00000547018 MRPS28Q9Y2Q9 187 aaKnown RBP11.21□□□□□ -0.61
SCAF11-209ENST00000547018 ETV7Q9Y603 341 aa11.21□□□□□ -0.61
SCAF11-209ENST00000547018 COL6A6A6NMZ7 2263 aa11.21□□□□□ -0.61
SCAF11-209ENST00000547018 ADAMTS20P59510 1910 aa11.21□□□□□ -0.62
SCAF11-209ENST00000547018 C3orf80F5H4A9 247 aa11.21□□□□□ -0.62
SCAF11-209ENST00000547018 H7C417 338 aa11.21□□□□□ -0.62
SCAF11-209ENST00000547018 SDCBPO00560 298 aaPredicted RBP11.21□□□□□ -0.62
SCAF11-209ENST00000547018 SOCS1O15524 211 aa11.21□□□□□ -0.62
SCAF11-209ENST00000547018 BAMBIQ13145 260 aa11.21□□□□□ -0.62
SCAF11-209ENST00000547018 BEX5Q5H9J7 111 aa11.21□□□□□ -0.62
SCAF11-209ENST00000547018 ELMOD2Q8IZ81 293 aa11.21□□□□□ -0.62
SCAF11-209ENST00000547018 FNDC9Q8TBE3 224 aa11.21□□□□□ -0.62
SCAF11-209ENST00000547018 M1APQ8TC57 530 aa11.21□□□□□ -0.62
SCAF11-209ENST00000547018 MTFP1Q9UDX5 166 aa11.21□□□□□ -0.62
SCAF11-209ENST00000547018 POM121CA8CG34 1229 aa11.2□□□□□ -0.62
SCAF11-209ENST00000547018 C1QBP02746 253 aa11.2□□□□□ -0.62
SCAF11-209ENST00000547018 VSIG10L2P0DP72 767 aa11.2□□□□□ -0.62
SCAF11-209ENST00000547018 VSIG8P0DPA2 414 aa11.2□□□□□ -0.62
SCAF11-209ENST00000547018 CD59P13987 128 aa11.2□□□□□ -0.62
SCAF11-209ENST00000547018 FAUP35544 74 aaKnown RBP11.2□□□□□ -0.62
SCAF11-209ENST00000547018 HTR5AP47898 357 aa11.2□□□□□ -0.62
SCAF11-209ENST00000547018 MMP16P51512 607 aa11.2□□□□□ -0.62
SCAF11-209ENST00000547018 BTG1P62324 171 aa11.2□□□□□ -0.62
SCAF11-209ENST00000547018 TNK1Q13470 666 aa11.2□□□□□ -0.62
SCAF11-209ENST00000547018 SLC25A47Q6Q0C1 308 aa11.2□□□□□ -0.62
SCAF11-209ENST00000547018 RHOUQ7L0Q8 258 aa11.2□□□□□ -0.62
SCAF11-209ENST00000547018 GABRG1Q8N1C3 465 aa11.2□□□□□ -0.62
SCAF11-209ENST00000547018 SEH1LQ96EE3 360 aa11.2□□□□□ -0.62
SCAF11-209ENST00000547018 FBXO17Q96EF6 278 aa11.2□□□□□ -0.62
SCAF11-209ENST00000547018 SORCS2Q96PQ0 1159 aa11.2□□□□□ -0.62
SCAF11-209ENST00000547018 PLEKHA6Q9Y2H5 1048 aa11.2□□□□□ -0.62
SCAF11-209ENST00000547018 EXPH5Q8NEV8 1989 aa11.2□□□□□ -0.62
SCAF11-209ENST00000547018 NCKAP5O14513 1909 aa11.2□□□□□ -0.62
SCAF11-209ENST00000547018 A0A1W2PR80 420 aa11.2□□□□□ -0.62
SCAF11-209ENST00000547018 M0R135 149 aa11.2□□□□□ -0.62
SCAF11-209ENST00000547018 ARPC5O15511 151 aa11.2□□□□□ -0.62
SCAF11-209ENST00000547018 SPRY1O43609 319 aaPredicted RBP11.2□□□□□ -0.62
SCAF11-209ENST00000547018 CREBL2O60519 120 aaPredicted RBP11.2□□□□□ -0.62
SCAF11-209ENST00000547018 IGHMP01871 453 aa11.2□□□□□ -0.62
SCAF11-209ENST00000547018 AKAIN1P0CW23 69 aa11.2□□□□□ -0.62
SCAF11-209ENST00000547018 TMEM225BP0DP42 221 aa11.2□□□□□ -0.62
SCAF11-209ENST00000547018 GLI4P10075 376 aa11.2□□□□□ -0.62
SCAF11-209ENST00000547018 ZNF84P51523 738 aa11.2□□□□□ -0.62
SCAF11-209ENST00000547018 FOXG1P55316 489 aaPredicted RBP11.2□□□□□ -0.62
SCAF11-209ENST00000547018 ZP1P60852 638 aa11.2□□□□□ -0.62
SCAF11-209ENST00000547018 SNAI3Q3KNW1 292 aa11.2□□□□□ -0.62
SCAF11-209ENST00000547018 BAIAP2L2Q6UXY1 529 aa11.2□□□□□ -0.62
SCAF11-209ENST00000547018 RPS4Y2Q8TD47 263 aa11.2□□□□□ -0.62
SCAF11-209ENST00000547018 ZNF799Q96GE5 643 aa11.2□□□□□ -0.62
SCAF11-209ENST00000547018 ATRXP46100 2492 aa11.2□□□□□ -0.62
SCAF11-209ENST00000547018 UBE2QL1A1L167 161 aa11.2□□□□□ -0.62
SCAF11-209ENST00000547018 AQP8O94778 261 aa11.2□□□□□ -0.62
SCAF11-209ENST00000547018 IFNA6P05013 189 aa11.2□□□□□ -0.62
SCAF11-209ENST00000547018 RAC1P63000 192 aa11.2□□□□□ -0.62
SCAF11-209ENST00000547018 DYRK1AQ13627 763 aa11.2□□□□□ -0.62
SCAF11-209ENST00000547018 NLRC3Q7RTR2 1065 aa11.2□□□□□ -0.62
SCAF11-209ENST00000547018 FGFBP3Q8TAT2 258 aa11.2□□□□□ -0.62
SCAF11-209ENST00000547018 SGCZQ96LD1 299 aa11.2□□□□□ -0.62
SCAF11-209ENST00000547018 POFUT1Q9H488 388 aa11.2□□□□□ -0.62
SCAF11-209ENST00000547018 LDAHQ9H6V9 325 aa11.2□□□□□ -0.62
SCAF11-209ENST00000547018 ZNF701Q9NV72 531 aaPredicted RBP11.2□□□□□ -0.62
SCAF11-209ENST00000547018 RHBDD3Q9Y3P4 386 aa11.2□□□□□ -0.62
SCAF11-209ENST00000547018 HEATR1Q9H583 2144 aaKnown RBP11.19□□□□□ -0.62
SCAF11-209ENST00000547018 DKK1O94907 266 aa11.19□□□□□ -0.62
SCAF11-209ENST00000547018 CD1AP06126 327 aa11.19□□□□□ -0.62
SCAF11-209ENST00000547018 ZNF32P17041 273 aa11.19□□□□□ -0.62
SCAF11-209ENST00000547018 GNG2P59768 71 aa11.19□□□□□ -0.62
SCAF11-209ENST00000547018 PMP22Q01453 160 aa11.19□□□□□ -0.62
SCAF11-209ENST00000547018 UNC119Q13432 240 aa11.19□□□□□ -0.62
SCAF11-209ENST00000547018 POU4F3Q15319 338 aa11.19□□□□□ -0.62
SCAF11-209ENST00000547018 OR1C1Q15619 314 aa11.19□□□□□ -0.62
SCAF11-209ENST00000547018 LAMTOR1Q6IAA8 161 aa11.19□□□□□ -0.62
SCAF11-209ENST00000547018 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.19□□□□□ -0.62
SCAF11-209ENST00000547018 OR51T1Q8NGJ9 327 aa11.19□□□□□ -0.62
SCAF11-209ENST00000547018 UTP23Q9BRU9 249 aaKnown RBP11.19□□□□□ -0.62
SCAF11-209ENST00000547018 CSAG2Q9Y5P2 127 aa11.19□□□□□ -0.62
SCAF11-209ENST00000547018 TLN1Q9Y490 2541 aaKnown RBP11.19□□□□□ -0.62
SCAF11-209ENST00000547018 A0A1B0GTI1 187 aa11.19□□□□□ -0.62
SCAF11-209ENST00000547018 MEGF11A6BM72 1044 aa11.19□□□□□ -0.62
SCAF11-209ENST00000547018 KCNAB3O43448 404 aa11.19□□□□□ -0.62
SCAF11-209ENST00000547018 ZNF35P13682 527 aa11.19□□□□□ -0.62
SCAF11-209ENST00000547018 ACP1P24666 158 aa11.19□□□□□ -0.62
SCAF11-209ENST00000547018 SSPNQ14714 243 aa11.19□□□□□ -0.62
SCAF11-209ENST00000547018 ZNF813Q6ZN06 617 aa11.19□□□□□ -0.62
SCAF11-209ENST00000547018 SLC16A14Q7RTX9 510 aa11.19□□□□□ -0.62
SCAF11-209ENST00000547018 MUC20Q8N307 709 aaPredicted RBP11.19□□□□□ -0.62
SCAF11-209ENST00000547018 SLC22A24Q8N4F4 322 aa11.19□□□□□ -0.62
SCAF11-209ENST00000547018 ZIC4Q8N9L1 334 aa11.19□□□□□ -0.62
SCAF11-209ENST00000547018 GJC3Q8NFK1 279 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms