RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 CD99P14209 185 aa12.3□□□□□ -0.44
DDX54-203ENST00000546869 ACHEP22303 614 aa12.3□□□□□ -0.44
DDX54-203ENST00000546869 TNFSF4P23510 183 aa12.3□□□□□ -0.44
DDX54-203ENST00000546869 TMEM33P57088 247 aa12.3□□□□□ -0.44
DDX54-203ENST00000546869 CCL8P80075 99 aa12.3□□□□□ -0.44
DDX54-203ENST00000546869 ZNF85Q03923 595 aa12.3□□□□□ -0.44
DDX54-203ENST00000546869 TNK1Q13470 666 aa12.3□□□□□ -0.44
DDX54-203ENST00000546869 SNCBQ16143 134 aa12.3□□□□□ -0.44
DDX54-203ENST00000546869 CDONQ4KMG0 1287 aa12.3□□□□□ -0.44
DDX54-203ENST00000546869 SSX6Q7RTT6 188 aa12.3□□□□□ -0.44
DDX54-203ENST00000546869 CELF2-AS1Q8N7Q2 184 aa12.3□□□□□ -0.44
DDX54-203ENST00000546869 OR2AE1Q8NHA4 323 aa12.3□□□□□ -0.44
DDX54-203ENST00000546869 SPRYD4Q8WW59 207 aaPredicted RBP12.3□□□□□ -0.44
DDX54-203ENST00000546869 GTF3AQ92664 365 aaKnown RBP12.3□□□□□ -0.44
DDX54-203ENST00000546869 REEP6Q96HR9 211 aa12.3□□□□□ -0.44
DDX54-203ENST00000546869 CHODLQ9H9P2 273 aa12.3□□□□□ -0.44
DDX54-203ENST00000546869 SAP30LQ9HAJ7 183 aa12.3□□□□□ -0.44
DDX54-203ENST00000546869 TMEM100Q9NV29 134 aa12.3□□□□□ -0.44
DDX54-203ENST00000546869 NOP16Q9Y3C1 178 aaKnown RBP12.3□□□□□ -0.44
DDX54-203ENST00000546869 SNX5Q9Y5X3 404 aa12.3□□□□□ -0.44
DDX54-203ENST00000546869 R4GMQ9 66 aa12.3□□□□□ -0.44
DDX54-203ENST00000546869 hCG_38984A0A1B0GV85 526 aa12.29□□□□□ -0.44
DDX54-203ENST00000546869 DAPL1A0PJW8 107 aa12.29□□□□□ -0.44
DDX54-203ENST00000546869 IRGMA1A4Y4 181 aa12.29□□□□□ -0.44
DDX54-203ENST00000546869 GGT3PA6NGU5 568 aa12.29□□□□□ -0.44
DDX54-203ENST00000546869 PSMD9O00233 223 aa12.29□□□□□ -0.44
DDX54-203ENST00000546869 SPRY3O43610 288 aa12.29□□□□□ -0.44
DDX54-203ENST00000546869 PNPP00491 289 aa12.29□□□□□ -0.44
DDX54-203ENST00000546869 TACSTD2P09758 323 aa12.29□□□□□ -0.44
DDX54-203ENST00000546869 ATP6V1B1P15313 513 aa12.29□□□□□ -0.44
DDX54-203ENST00000546869 TNFRSF1AP19438 455 aa12.29□□□□□ -0.44
DDX54-203ENST00000546869 COL8A2P25067 703 aa12.29□□□□□ -0.44
DDX54-203ENST00000546869 RIN1Q13671 783 aa12.29□□□□□ -0.44
DDX54-203ENST00000546869 GALEQ14376 348 aa12.29□□□□□ -0.44
DDX54-203ENST00000546869 OR8B8Q15620 311 aa12.29□□□□□ -0.44
DDX54-203ENST00000546869 TIGD6Q17RP2 521 aa12.29□□□□□ -0.44
DDX54-203ENST00000546869 LIPNQ5VXI9 398 aa12.29□□□□□ -0.44
DDX54-203ENST00000546869 THAP5Q7Z6K1 395 aa12.29□□□□□ -0.44
DDX54-203ENST00000546869 ELMOD2Q8IZ81 293 aa12.29□□□□□ -0.44
DDX54-203ENST00000546869 OR5AS1Q8N127 324 aa12.29□□□□□ -0.44
DDX54-203ENST00000546869 CSNK2A3Q8NEV1 391 aa12.29□□□□□ -0.44
DDX54-203ENST00000546869 OR8B12Q8NGG6 310 aa12.29□□□□□ -0.44
DDX54-203ENST00000546869 ELMOD3Q96FG2 381 aa12.29□□□□□ -0.44
DDX54-203ENST00000546869 MRPL48Q96GC5 212 aaKnown RBP12.29□□□□□ -0.44
DDX54-203ENST00000546869 C18orf12Q96KH6 178 aa12.29□□□□□ -0.44
DDX54-203ENST00000546869 SIGLEC11Q96RL6 698 aa12.29□□□□□ -0.44
DDX54-203ENST00000546869 TBX5Q99593 518 aa12.29□□□□□ -0.44
DDX54-203ENST00000546869 ZNF649Q9BS31 505 aa12.29□□□□□ -0.44
DDX54-203ENST00000546869 REG4Q9BYZ8 158 aa12.29□□□□□ -0.44
DDX54-203ENST00000546869 PBOV1Q9GZY1 135 aa12.29□□□□□ -0.44
DDX54-203ENST00000546869 AMBNQ9NP70 447 aa12.29□□□□□ -0.44
DDX54-203ENST00000546869 FGF20Q9NP95 211 aaPredicted RBP12.29□□□□□ -0.44
DDX54-203ENST00000546869 G6PC2Q9NQR9 355 aa12.29□□□□□ -0.44
DDX54-203ENST00000546869 PLCXD1Q9NUJ7 323 aa12.29□□□□□ -0.44
DDX54-203ENST00000546869 N6AMT1Q9Y5N5 214 aa12.29□□□□□ -0.44
DDX54-203ENST00000546869 IGHV4-30-2A0A087WSY4 118 aa12.28□□□□□ -0.44
DDX54-203ENST00000546869 A0A096LNT2 108 aa12.28□□□□□ -0.44
DDX54-203ENST00000546869 TRIM64A6NGJ6 449 aa12.28□□□□□ -0.44
DDX54-203ENST00000546869 TRIM64BA6NI03 449 aa12.28□□□□□ -0.44
DDX54-203ENST00000546869 RRP9O43818 475 aaKnown RBP12.28□□□□□ -0.44
DDX54-203ENST00000546869 FAM20BO75063 409 aa12.28□□□□□ -0.44
DDX54-203ENST00000546869 RP2O75695 350 aa12.28□□□□□ -0.44
DDX54-203ENST00000546869 APOL3O95236 402 aa12.28□□□□□ -0.44
DDX54-203ENST00000546869 GNAO1P09471 354 aa12.28□□□□□ -0.44
DDX54-203ENST00000546869 DCKP27707 260 aa12.28□□□□□ -0.44
DDX54-203ENST00000546869 HSPA13P48723 471 aa12.28□□□□□ -0.44
DDX54-203ENST00000546869 GSK3AP49840 483 aa12.28□□□□□ -0.44
DDX54-203ENST00000546869 AQP4P55087 323 aa12.28□□□□□ -0.44
DDX54-203ENST00000546869 ACTA2P62736 377 aa12.28□□□□□ -0.44
DDX54-203ENST00000546869 ACTG2P63267 376 aa12.28□□□□□ -0.44
DDX54-203ENST00000546869 CSNK2BP67870 215 aa12.28□□□□□ -0.44
DDX54-203ENST00000546869 TNFAIP6P98066 277 aaPredicted RBP12.28□□□□□ -0.44
DDX54-203ENST00000546869 SMN1Q16637 294 aaKnown RBP12.28□□□□□ -0.44
DDX54-203ENST00000546869 TSTQ16762 297 aaKnown RBP12.28□□□□□ -0.44
DDX54-203ENST00000546869 FDX2Q6P4F2 183 aa12.28□□□□□ -0.44
DDX54-203ENST00000546869 Q6ZSR3 168 aa12.28□□□□□ -0.44
DDX54-203ENST00000546869 SYS1Q8N2H4 156 aa12.28□□□□□ -0.44
DDX54-203ENST00000546869 YIPF7Q8N8F6 280 aa12.28□□□□□ -0.44
DDX54-203ENST00000546869 SPERTQ8NA61 448 aa12.28□□□□□ -0.44
DDX54-203ENST00000546869 PLPP7Q8NBV4 271 aa12.28□□□□□ -0.44
DDX54-203ENST00000546869 OR2Z1Q8NG97 314 aa12.28□□□□□ -0.44
DDX54-203ENST00000546869 CNIH3Q8TBE1 160 aa12.28□□□□□ -0.44
DDX54-203ENST00000546869 HAVCR2Q8TDQ0 301 aa12.28□□□□□ -0.44
DDX54-203ENST00000546869 COX4I2Q96KJ9 171 aa12.28□□□□□ -0.44
DDX54-203ENST00000546869 PIMREGQ9BSJ6 248 aa12.28□□□□□ -0.44
DDX54-203ENST00000546869 BRD7Q9NPI1 651 aa12.28□□□□□ -0.44
DDX54-203ENST00000546869 MYRFQ9Y2G1 1151 aa12.28□□□□□ -0.44
DDX54-203ENST00000546869 RRP15Q9Y3B9 282 aaKnown RBP12.28□□□□□ -0.44
DDX54-203ENST00000546869 MAP1AP78559 2803 aaPredicted RBP12.27□□□□□ -0.44
DDX54-203ENST00000546869 IGHV1-69-2A0A0G2JMI3 117 aa12.27□□□□□ -0.45
DDX54-203ENST00000546869 LOC110117498-PIK3R3F6TDL0 507 aa12.27□□□□□ -0.45
DDX54-203ENST00000546869 IFNL4K9M1U5 179 aa12.27□□□□□ -0.45
DDX54-203ENST00000546869 MAGEB4O15481 346 aaPredicted RBP12.27□□□□□ -0.45
DDX54-203ENST00000546869 MLNRO43193 412 aa12.27□□□□□ -0.45
DDX54-203ENST00000546869 LILRA1O75019 489 aa12.27□□□□□ -0.45
DDX54-203ENST00000546869 PTBP3O95758 552 aaKnown RBP12.27□□□□□ -0.45
DDX54-203ENST00000546869 CD200P41217 278 aa12.27□□□□□ -0.45
DDX54-203ENST00000546869 NR4A2P43354 598 aa12.27□□□□□ -0.45
DDX54-203ENST00000546869 GATA4P43694 442 aa12.27□□□□□ -0.45
DDX54-203ENST00000546869 SRP9P49458 86 aaKnown RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms