RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 OR8J3Q8NGG0 315 aa11.99□□□□□ -0.49
RTN3-214ENST00000545432 PIFOQ8TCI5 191 aa11.99□□□□□ -0.49
RTN3-214ENST00000545432 C12orf43Q96C57 262 aaKnown RBP11.99□□□□□ -0.49
RTN3-214ENST00000545432 OR4F4Q96R69 305 aa11.99□□□□□ -0.49
RTN3-214ENST00000545432 SSX3Q99909 188 aa11.99□□□□□ -0.49
RTN3-214ENST00000545432 ADAT1Q9BUB4 502 aaKnown RBP11.99□□□□□ -0.49
RTN3-214ENST00000545432 SERTAD4Q9NUC0 356 aa11.99□□□□□ -0.49
RTN3-214ENST00000545432 CYB5R1Q9UHQ9 305 aa11.99□□□□□ -0.49
RTN3-214ENST00000545432 MEIOCA2RUB1 952 aa11.98□□□□□ -0.49
RTN3-214ENST00000545432 F5H5K5 113 aa11.98□□□□□ -0.49
RTN3-214ENST00000545432 M0R1W7 72 aa11.98□□□□□ -0.49
RTN3-214ENST00000545432 FXYD1O00168 92 aa11.98□□□□□ -0.49
RTN3-214ENST00000545432 NDUFB2O95178 105 aa11.98□□□□□ -0.49
RTN3-214ENST00000545432 PAHP00439 452 aa11.98□□□□□ -0.49
RTN3-214ENST00000545432 LCATP04180 440 aa11.98□□□□□ -0.49
RTN3-214ENST00000545432 CRABP1P29762 137 aa11.98□□□□□ -0.49
RTN3-214ENST00000545432 FXYD6P3P58550 94 aa11.98□□□□□ -0.49
RTN3-214ENST00000545432 ELF3P78545 371 aaPredicted RBP11.98□□□□□ -0.49
RTN3-214ENST00000545432 ZNF92Q03936 586 aa11.98□□□□□ -0.49
RTN3-214ENST00000545432 POU4F2Q12837 409 aa11.98□□□□□ -0.49
RTN3-214ENST00000545432 MEP1BQ16820 701 aa11.98□□□□□ -0.49
RTN3-214ENST00000545432 PCK2Q16822 640 aa11.98□□□□□ -0.49
RTN3-214ENST00000545432 MICBQ29980 383 aa11.98□□□□□ -0.49
RTN3-214ENST00000545432 RABL3Q5HYI8 236 aa11.98□□□□□ -0.49
RTN3-214ENST00000545432 WDR38Q5JTN6 314 aa11.98□□□□□ -0.49
RTN3-214ENST00000545432 TBPL2Q6SJ96 375 aa11.98□□□□□ -0.49
RTN3-214ENST00000545432 CFAP77Q6ZQR2 320 aa11.98□□□□□ -0.49
RTN3-214ENST00000545432 LIAT1Q6ZQX7 453 aa11.98□□□□□ -0.49
RTN3-214ENST00000545432 SLC26A10Q8NG04 563 aa11.98□□□□□ -0.49
RTN3-214ENST00000545432 TSSK2Q96PF2 358 aa11.98□□□□□ -0.49
RTN3-214ENST00000545432 CCL13Q99616 98 aa11.98□□□□□ -0.49
RTN3-214ENST00000545432 SH3GL1Q99961 368 aa11.98□□□□□ -0.49
RTN3-214ENST00000545432 PARD6BQ9BYG5 372 aa11.98□□□□□ -0.49
RTN3-214ENST00000545432 WNT10AQ9GZT5 417 aa11.98□□□□□ -0.49
RTN3-214ENST00000545432 FAM234AQ9H0X4 552 aa11.98□□□□□ -0.49
RTN3-214ENST00000545432 DNTTIP1Q9H147 329 aa11.98□□□□□ -0.49
RTN3-214ENST00000545432 RAB18Q9NP72 206 aa11.98□□□□□ -0.49
RTN3-214ENST00000545432 ONECUT1Q9UBC0 465 aa11.98□□□□□ -0.49
RTN3-214ENST00000545432 RAB21Q9UL25 225 aa11.98□□□□□ -0.49
RTN3-214ENST00000545432 B9D1Q9UPM9 204 aa11.98□□□□□ -0.49
RTN3-214ENST00000545432 AURKCQ9UQB9 309 aa11.98□□□□□ -0.49
RTN3-214ENST00000545432 SNX13Q9Y5W8 968 aa11.98□□□□□ -0.49
RTN3-214ENST00000545432 RYR2Q92736 4967 aa11.97□□□□□ -0.49
RTN3-214ENST00000545432 LOC100653049A0A140TA62 436 aa11.97□□□□□ -0.49
RTN3-214ENST00000545432 KRT34O76011 436 aa11.97□□□□□ -0.49
RTN3-214ENST00000545432 MPIG6BO95866 241 aa11.97□□□□□ -0.49
RTN3-214ENST00000545432 ANOS1P23352 680 aa11.97□□□□□ -0.49
RTN3-214ENST00000545432 GGT2P36268 569 aa11.97□□□□□ -0.49
RTN3-214ENST00000545432 DLX1P56177 255 aa11.97□□□□□ -0.49
RTN3-214ENST00000545432 MAGOHP61326 146 aaKnown RBP11.97□□□□□ -0.49
RTN3-214ENST00000545432 PRB3Q04118 309 aaPredicted RBP11.97□□□□□ -0.49
RTN3-214ENST00000545432 MZT1Q08AG7 82 aa11.97□□□□□ -0.49
RTN3-214ENST00000545432 TRAP1Q12931 704 aaKnown RBP11.97□□□□□ -0.49
RTN3-214ENST00000545432 KLRD1Q13241 179 aa11.97□□□□□ -0.49
RTN3-214ENST00000545432 CYLC2Q14093 348 aaPredicted RBP11.97□□□□□ -0.49
RTN3-214ENST00000545432 NCR3LG1Q68D85 454 aa11.97□□□□□ -0.49
RTN3-214ENST00000545432 SLC36A1Q7Z2H8 476 aa11.97□□□□□ -0.49
RTN3-214ENST00000545432 MRPL21Q7Z2W9 205 aaKnown RBP11.97□□□□□ -0.49
RTN3-214ENST00000545432 OR6V1Q8N148 313 aa11.97□□□□□ -0.49
RTN3-214ENST00000545432 PNKDQ8N490 385 aa11.97□□□□□ -0.49
RTN3-214ENST00000545432 SLC7A13Q8TCU3 470 aa11.97□□□□□ -0.49
RTN3-214ENST00000545432 C17orf50Q8WW18 174 aa11.97□□□□□ -0.49
RTN3-214ENST00000545432 R3HDM4Q96D70 268 aa11.97□□□□□ -0.49
RTN3-214ENST00000545432 ATF6BQ99941 703 aa11.97□□□□□ -0.49
RTN3-214ENST00000545432 FNDC11Q9BVV2 318 aa11.97□□□□□ -0.49
RTN3-214ENST00000545432 ANKRD19PQ9H560 264 aa11.97□□□□□ -0.49
RTN3-214ENST00000545432 METTL8Q9H825 291 aaKnown RBP11.97□□□□□ -0.49
RTN3-214ENST00000545432 C14orf119Q9NWQ9 140 aa11.97□□□□□ -0.49
RTN3-214ENST00000545432 IGHV3OR15-7A0A075B7D8 119 aa11.96□□□□□ -0.49
RTN3-214ENST00000545432 J3KTA2 159 aa11.96□□□□□ -0.49
RTN3-214ENST00000545432 FBXO24O75426 580 aa11.96□□□□□ -0.49
RTN3-214ENST00000545432 CD28P10747 220 aa11.96□□□□□ -0.49
RTN3-214ENST00000545432 GPR4P46093 362 aa11.96□□□□□ -0.49
RTN3-214ENST00000545432 TPTEP56180 551 aa11.96□□□□□ -0.49
RTN3-214ENST00000545432 DPY19L2P2Q6ZN68 376 aa11.96□□□□□ -0.49
RTN3-214ENST00000545432 WDR86Q86TI4 376 aa11.96□□□□□ -0.49
RTN3-214ENST00000545432 ZBTB46Q86UZ6 589 aa11.96□□□□□ -0.49
RTN3-214ENST00000545432 LYG1Q8N1E2 194 aa11.96□□□□□ -0.49
RTN3-214ENST00000545432 FAM216BQ8N7L0 139 aa11.96□□□□□ -0.49
RTN3-214ENST00000545432 ZBTB9Q96C00 473 aa11.96□□□□□ -0.49
RTN3-214ENST00000545432 TLNRD1Q9H1K6 362 aa11.96□□□□□ -0.49
RTN3-214ENST00000545432 RERGLQ9H628 205 aa11.96□□□□□ -0.49
RTN3-214ENST00000545432 ZNF702PQ9H963 129 aa11.96□□□□□ -0.49
RTN3-214ENST00000545432 RHCGQ9UBD6 479 aa11.96□□□□□ -0.49
RTN3-214ENST00000545432 POLR1DQ9Y2S0 133 aa11.96□□□□□ -0.49
RTN3-214ENST00000545432 IER3IP1Q9Y5U9 82 aa11.96□□□□□ -0.49
RTN3-214ENST00000545432 A0A1W2PRD5 423 aa11.95□□□□□ -0.5
RTN3-214ENST00000545432 A0A1W2PRF3 423 aa11.95□□□□□ -0.5
RTN3-214ENST00000545432 A0A1W2PRM7 423 aa11.95□□□□□ -0.5
RTN3-214ENST00000545432 M0R135 149 aa11.95□□□□□ -0.5
RTN3-214ENST00000545432 ACOT8O14734 319 aa11.95□□□□□ -0.5
RTN3-214ENST00000545432 NDUFB3O43676 98 aa11.95□□□□□ -0.5
RTN3-214ENST00000545432 CHST1O43916 411 aa11.95□□□□□ -0.5
RTN3-214ENST00000545432 NPPAP01160 153 aa11.95□□□□□ -0.5
RTN3-214ENST00000545432 GRPP07492 148 aa11.95□□□□□ -0.5
RTN3-214ENST00000545432 YAP1P46937 504 aaKnown RBP11.95□□□□□ -0.5
RTN3-214ENST00000545432 COL10A1Q03692 680 aa11.95□□□□□ -0.5
RTN3-214ENST00000545432 LRRC75BQ2VPJ9 315 aa11.95□□□□□ -0.5
RTN3-214ENST00000545432 RFX4Q33E94 735 aa11.95□□□□□ -0.5
RTN3-214ENST00000545432 NSUN5P1Q3KNT7 163 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms