RNA–Protein interactions for RNA: ENST00000544610.1

CDCA3-209, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-209ENST00000544610 PELI1Q96FA3 418 aa5.7□□□□□ -1.5
CDCA3-209ENST00000544610 C4orf36Q96KX1 117 aa5.7□□□□□ -1.5
CDCA3-209ENST00000544610 OPALINQ96PE5 141 aa5.7□□□□□ -1.5
CDCA3-209ENST00000544610 RHNO1Q9BSD3 238 aa5.7□□□□□ -1.5
CDCA3-209ENST00000544610 RGCCQ9H4X1 137 aa5.7□□□□□ -1.5
CDCA3-209ENST00000544610 OPA3Q9H6K4 179 aa5.7□□□□□ -1.5
CDCA3-209ENST00000544610 ESRP2Q9H6T0 727 aaKnown RBP5.7□□□□□ -1.5
CDCA3-209ENST00000544610 SEC61A2Q9H9S3 476 aa5.7□□□□□ -1.5
CDCA3-209ENST00000544610 CLEC2DQ9UHP7 191 aa5.7□□□□□ -1.5
CDCA3-209ENST00000544610 POLR1DQ9Y2S0 133 aa5.7□□□□□ -1.5
CDCA3-209ENST00000544610 LHFPL6Q9Y693 200 aa5.7□□□□□ -1.5
CDCA3-209ENST00000544610 A0A0U1RQV5 110 aa5.69□□□□□ -1.5
CDCA3-209ENST00000544610 TRDV1A0A1B0GX56 115 aa5.69□□□□□ -1.5
CDCA3-209ENST00000544610 A0A1W2PPL8 197 aa5.69□□□□□ -1.5
CDCA3-209ENST00000544610 LOC390937A0A1W2PQ73 354 aa5.69□□□□□ -1.5
CDCA3-209ENST00000544610 DPPA5A6NC42 116 aa5.69□□□□□ -1.5
CDCA3-209ENST00000544610 ANKRD61A6NGH8 418 aa5.69□□□□□ -1.5
CDCA3-209ENST00000544610 SELENOFO60613 162 aa5.69□□□□□ -1.5
CDCA3-209ENST00000544610 SC5DO75845 299 aa5.69□□□□□ -1.5
CDCA3-209ENST00000544610 SERPINA5P05154 406 aa5.69□□□□□ -1.5
CDCA3-209ENST00000544610 LCKP06239 509 aa5.69□□□□□ -1.5
CDCA3-209ENST00000544610 CD3EP07766 207 aa5.69□□□□□ -1.5
CDCA3-209ENST00000544610 MMP7P09237 267 aaPredicted RBP5.69□□□□□ -1.5
CDCA3-209ENST00000544610 SPARCP09486 303 aa5.69□□□□□ -1.5
CDCA3-209ENST00000544610 UBCP0CG48 685 aaKnown RBP5.69□□□□□ -1.5
CDCA3-209ENST00000544610 CD36P16671 472 aa5.69□□□□□ -1.5
CDCA3-209ENST00000544610 CFL1P23528 166 aaKnown RBP5.69□□□□□ -1.5
CDCA3-209ENST00000544610 IL32P24001 234 aa5.69□□□□□ -1.5
CDCA3-209ENST00000544610 CDKN1AP38936 164 aa5.69□□□□□ -1.5
CDCA3-209ENST00000544610 NAA10P41227 235 aaPredicted RBP5.69□□□□□ -1.5
CDCA3-209ENST00000544610 OR12D2P58182 307 aa5.69□□□□□ -1.5
CDCA3-209ENST00000544610 BSPH1Q075Z2 132 aa5.69□□□□□ -1.5
CDCA3-209ENST00000544610 DYNC1I2Q13409 638 aaKnown RBP5.69□□□□□ -1.5
CDCA3-209ENST00000544610 ALKBH1Q13686 389 aaKnown RBP5.69□□□□□ -1.5
CDCA3-209ENST00000544610 EIF2B1Q14232 305 aaKnown RBP5.69□□□□□ -1.5
CDCA3-209ENST00000544610 TSC22D1Q15714 1073 aa5.69□□□□□ -1.5
CDCA3-209ENST00000544610 TAB1Q15750 504 aa5.69□□□□□ -1.5
CDCA3-209ENST00000544610 MEP1BQ16820 701 aa5.69□□□□□ -1.5
CDCA3-209ENST00000544610 ELFN2Q5R3F8 820 aa5.69□□□□□ -1.5
CDCA3-209ENST00000544610 TIMM23BQ5SRD1 257 aa5.69□□□□□ -1.5
CDCA3-209ENST00000544610 PHYHD1Q5SRE7 291 aa5.69□□□□□ -1.5
CDCA3-209ENST00000544610 SFRP5Q5T4F7 317 aa5.69□□□□□ -1.5
CDCA3-209ENST00000544610 LCE1DQ5T752 114 aa5.69□□□□□ -1.5
CDCA3-209ENST00000544610 TMEM244Q5VVB8 128 aa5.69□□□□□ -1.5
CDCA3-209ENST00000544610 CARD17Q5XLA6 110 aa5.69□□□□□ -1.5
CDCA3-209ENST00000544610 KLHL24Q6TFL4 600 aa5.69□□□□□ -1.5
CDCA3-209ENST00000544610 ZNF813Q6ZN06 617 aa5.69□□□□□ -1.5
CDCA3-209ENST00000544610 KRT74Q7RTS7 529 aa5.69□□□□□ -1.5
CDCA3-209ENST00000544610 SLC16A14Q7RTX9 510 aa5.69□□□□□ -1.5
CDCA3-209ENST00000544610 NUFIP2Q7Z417 695 aaKnown RBP5.69□□□□□ -1.5
CDCA3-209ENST00000544610 KRT77Q7Z794 578 aa5.69□□□□□ -1.5
CDCA3-209ENST00000544610 SATL1Q86VE3 508 aa5.69□□□□□ -1.5
CDCA3-209ENST00000544610 KRTAP19-1Q8IUB9 90 aa5.69□□□□□ -1.5
CDCA3-209ENST00000544610 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.69□□□□□ -1.5
CDCA3-209ENST00000544610 CROCCP3Q8IVE0 287 aa5.69□□□□□ -1.5
CDCA3-209ENST00000544610 WDFY1Q8IWB7 410 aa5.69□□□□□ -1.5
CDCA3-209ENST00000544610 ZNF433Q8N7K0 673 aaPredicted RBP5.69□□□□□ -1.5
CDCA3-209ENST00000544610 KBTBD8Q8NFY9 601 aa5.69□□□□□ -1.5
CDCA3-209ENST00000544610 OR51L1Q8NGJ5 315 aa5.69□□□□□ -1.5
CDCA3-209ENST00000544610 OR1K1Q8NGR3 316 aa5.69□□□□□ -1.5
CDCA3-209ENST00000544610 OR2G2Q8NGZ5 317 aa5.69□□□□□ -1.5
CDCA3-209ENST00000544610 THEM6Q8WUY1 208 aa5.69□□□□□ -1.5
CDCA3-209ENST00000544610 SPRYD4Q8WW59 207 aaPredicted RBP5.69□□□□□ -1.5
CDCA3-209ENST00000544610 TMEM158Q8WZ71 300 aa5.69□□□□□ -1.5
CDCA3-209ENST00000544610 HSD17B8Q92506 261 aa5.69□□□□□ -1.5
CDCA3-209ENST00000544610 NSMAFQ92636 917 aa5.69□□□□□ -1.5
CDCA3-209ENST00000544610 BCL2L2Q92843 193 aaPredicted RBP5.69□□□□□ -1.5
CDCA3-209ENST00000544610 NEUROG1Q92886 237 aa5.69□□□□□ -1.5
CDCA3-209ENST00000544610 SPTSSAQ969W0 71 aa5.69□□□□□ -1.5
CDCA3-209ENST00000544610 SLAMF6Q96DU3 332 aa5.69□□□□□ -1.5
CDCA3-209ENST00000544610 ALKBH3Q96Q83 286 aaPredicted RBP5.69□□□□□ -1.5
CDCA3-209ENST00000544610 OR5M11Q96RB7 305 aa5.69□□□□□ -1.5
CDCA3-209ENST00000544610 KCNJ15Q99712 375 aa5.69□□□□□ -1.5
CDCA3-209ENST00000544610 ATF6BQ99941 703 aa5.69□□□□□ -1.5
CDCA3-209ENST00000544610 SH3GL3Q99963 347 aa5.69□□□□□ -1.5
CDCA3-209ENST00000544610 TRAF4Q9BUZ4 470 aaPredicted RBP5.69□□□□□ -1.5
CDCA3-209ENST00000544610 FUNDC2Q9BWH2 189 aa5.69□□□□□ -1.5
CDCA3-209ENST00000544610 ZNF416Q9BWM5 594 aa5.69□□□□□ -1.5
CDCA3-209ENST00000544610 COMMD4Q9H0A8 199 aa5.69□□□□□ -1.5
CDCA3-209ENST00000544610 BARX1Q9HBU1 254 aaPredicted RBP5.69□□□□□ -1.5
CDCA3-209ENST00000544610 NGBQ9NPG2 151 aa5.69□□□□□ -1.5
CDCA3-209ENST00000544610 PNRC2Q9NPJ4 139 aaKnown RBP5.69□□□□□ -1.5
CDCA3-209ENST00000544610 ASH2LQ9UBL3 628 aa5.69□□□□□ -1.5
CDCA3-209ENST00000544610 RSL24D1Q9UHA3 163 aaKnown RBP5.69□□□□□ -1.5
CDCA3-209ENST00000544610 NUFIP1Q9UHK0 495 aaKnown RBP5.69□□□□□ -1.5
CDCA3-209ENST00000544610 MRM2Q9UI43 246 aaKnown RBP5.69□□□□□ -1.5
CDCA3-209ENST00000544610 ENPP5Q9UJA9 477 aa5.69□□□□□ -1.5
CDCA3-209ENST00000544610 STUB1Q9UNE7 303 aa5.69□□□□□ -1.5
CDCA3-209ENST00000544610 COPS3Q9UNS2 423 aa5.69□□□□□ -1.5
CDCA3-209ENST00000544610 GSTK1Q9Y2Q3 226 aa5.69□□□□□ -1.5
CDCA3-209ENST00000544610 ZNF281Q9Y2X9 895 aa5.69□□□□□ -1.5
CDCA3-209ENST00000544610 AMDHD2Q9Y303 409 aa5.69□□□□□ -1.5
CDCA3-209ENST00000544610 SF3B6Q9Y3B4 125 aaKnown RBP5.69□□□□□ -1.5
CDCA3-209ENST00000544610 SPEF1Q9Y4P9 236 aa5.69□□□□□ -1.5
CDCA3-209ENST00000544610 CEPT1Q9Y6K0 416 aa5.69□□□□□ -1.5
CDCA3-209ENST00000544610 R4GMQ9 66 aa5.69□□□□□ -1.5
CDCA3-209ENST00000544610 A3GALT2U3KPV4 340 aa5.69□□□□□ -1.5
CDCA3-209ENST00000544610 COL6A5A8TX70 2615 aa5.69□□□□□ -1.5
CDCA3-209ENST00000544610 DSCAMO60469 2012 aa5.69□□□□□ -1.5
CDCA3-209ENST00000544610 CHD3Q12873 2000 aaKnown RBP5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms