RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 NKX3-1Q99801 234 aaPredicted RBP3.3□□□□□ -1.88
SNHG1-220ENST00000544550 SLC35A5Q9BS91 424 aa3.3□□□□□ -1.88
SNHG1-220ENST00000544550 WACQ9BTA9 647 aa3.3□□□□□ -1.88
SNHG1-220ENST00000544550 FUT8Q9BYC5 575 aa3.3□□□□□ -1.88
SNHG1-220ENST00000544550 NUF2Q9BZD4 464 aa3.3□□□□□ -1.88
SNHG1-220ENST00000544550 PRSS22Q9GZN4 317 aa3.3□□□□□ -1.88
SNHG1-220ENST00000544550 SEMA6AQ9H2E6 1030 aa3.3□□□□□ -1.88
SNHG1-220ENST00000544550 TUBB1Q9H4B7 451 aa3.3□□□□□ -1.88
SNHG1-220ENST00000544550 NANSQ9NR45 359 aa3.3□□□□□ -1.88
SNHG1-220ENST00000544550 INPP5EQ9NRR6 644 aa3.3□□□□□ -1.88
SNHG1-220ENST00000544550 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.3□□□□□ -1.88
SNHG1-220ENST00000544550 STX18Q9P2W9 335 aaKnown RBP3.3□□□□□ -1.88
SNHG1-220ENST00000544550 ONECUT1Q9UBC0 465 aa3.3□□□□□ -1.88
SNHG1-220ENST00000544550 P2RX2Q9UBL9 471 aa3.3□□□□□ -1.88
SNHG1-220ENST00000544550 CTSZQ9UBR2 303 aa3.3□□□□□ -1.88
SNHG1-220ENST00000544550 DCDC2Q9UHG0 476 aa3.3□□□□□ -1.88
SNHG1-220ENST00000544550 ZNF443Q9Y2A4 671 aaPredicted RBP3.3□□□□□ -1.88
SNHG1-220ENST00000544550 FIS1Q9Y3D6 152 aa3.3□□□□□ -1.88
SNHG1-220ENST00000544550 LSM4Q9Y4Z0 139 aaKnown RBP3.3□□□□□ -1.88
SNHG1-220ENST00000544550 TIMM10BQ9Y5J6 103 aa3.3□□□□□ -1.88
SNHG1-220ENST00000544550 DNAJC15Q9Y5T4 150 aa3.3□□□□□ -1.88
SNHG1-220ENST00000544550 SACSQ9NZJ4 4579 aa3.3□□□□□ -1.88
SNHG1-220ENST00000544550 DNAH9Q9NYC9 4486 aa3.3□□□□□ -1.88
SNHG1-220ENST00000544550 PLXNB1O43157 2135 aa3.29□□□□□ -1.88
SNHG1-220ENST00000544550 IGKV1D-42A0A075B6H8 117 aa3.29□□□□□ -1.88
SNHG1-220ENST00000544550 TCRBV4S1A1TA0A5B7 111 aa3.29□□□□□ -1.88
SNHG1-220ENST00000544550 MCIDASD6RGH6 385 aa3.29□□□□□ -1.88
SNHG1-220ENST00000544550 C11orf98E9PRG8 122 aa3.29□□□□□ -1.88
SNHG1-220ENST00000544550 G3V2L1 256 aa3.29□□□□□ -1.88
SNHG1-220ENST00000544550 H0YHG0 523 aa3.29□□□□□ -1.88
SNHG1-220ENST00000544550 LGALS8O00214 317 aa3.29□□□□□ -1.88
SNHG1-220ENST00000544550 OR10H3O60404 316 aa3.29□□□□□ -1.88
SNHG1-220ENST00000544550 PEX11AO75192 247 aa3.29□□□□□ -1.88
SNHG1-220ENST00000544550 GLRA3O75311 464 aa3.29□□□□□ -1.88
SNHG1-220ENST00000544550 CPSF4O95639 269 aaKnown RBP3.29□□□□□ -1.88
SNHG1-220ENST00000544550 KRT75O95678 551 aa3.29□□□□□ -1.88
SNHG1-220ENST00000544550 BGLAPP02818 100 aa3.29□□□□□ -1.88
SNHG1-220ENST00000544550 FGF4P08620 206 aa3.29□□□□□ -1.88
SNHG1-220ENST00000544550 G6PDP11413 515 aa3.29□□□□□ -1.88
SNHG1-220ENST00000544550 PRG2P13727 222 aa3.29□□□□□ -1.88
SNHG1-220ENST00000544550 FPR3P25089 353 aa3.29□□□□□ -1.88
SNHG1-220ENST00000544550 DUSP1P28562 367 aa3.29□□□□□ -1.88
SNHG1-220ENST00000544550 SLC6A1P30531 599 aa3.29□□□□□ -1.88
SNHG1-220ENST00000544550 VDAC2P45880 294 aaPredicted RBP3.29□□□□□ -1.88
SNHG1-220ENST00000544550 CLDN8P56748 225 aa3.29□□□□□ -1.88
SNHG1-220ENST00000544550 NCALDP61601 193 aa3.29□□□□□ -1.88
SNHG1-220ENST00000544550 PSG4Q00888 419 aa3.29□□□□□ -1.88
SNHG1-220ENST00000544550 CFHR3Q02985 330 aa3.29□□□□□ -1.88
SNHG1-220ENST00000544550 LRRC74AQ0VAA2 488 aa3.29□□□□□ -1.88
SNHG1-220ENST00000544550 OR8B8Q15620 311 aa3.29□□□□□ -1.88
SNHG1-220ENST00000544550 HIST3H3Q16695 136 aa3.29□□□□□ -1.88
SNHG1-220ENST00000544550 CCDC153Q494R4 210 aa3.29□□□□□ -1.88
SNHG1-220ENST00000544550 FAM201AQ5SY85 155 aa3.29□□□□□ -1.88
SNHG1-220ENST00000544550 CEP85LQ5SZL2 805 aa3.29□□□□□ -1.88
SNHG1-220ENST00000544550 FAM27BQ5VT28 67 aa3.29□□□□□ -1.88
SNHG1-220ENST00000544550 OR4F3Q6IEY1 312 aa3.29□□□□□ -1.88
SNHG1-220ENST00000544550 NHLRC1Q6VVB1 395 aa3.29□□□□□ -1.88
SNHG1-220ENST00000544550 ADAMTSL5Q6ZMM2 481 aa3.29□□□□□ -1.88
SNHG1-220ENST00000544550 Q8N1X5 172 aa3.29□□□□□ -1.88
SNHG1-220ENST00000544550 CLDN22Q8N7P3 220 aa3.29□□□□□ -1.88
SNHG1-220ENST00000544550 NOXO1Q8NFA2 376 aa3.29□□□□□ -1.88
SNHG1-220ENST00000544550 OR8G5Q8NG78 346 aa3.29□□□□□ -1.88
SNHG1-220ENST00000544550 OR5AU1Q8NGC0 362 aa3.29□□□□□ -1.88
SNHG1-220ENST00000544550 OR10AD1Q8NGE0 317 aa3.29□□□□□ -1.88
SNHG1-220ENST00000544550 OR4X2Q8NGF9 303 aa3.29□□□□□ -1.88
SNHG1-220ENST00000544550 OR52L2PQ8NGH6 319 aa3.29□□□□□ -1.88
SNHG1-220ENST00000544550 AKR7LQ8NHP1 331 aa3.29□□□□□ -1.88
SNHG1-220ENST00000544550 ST8SIA4Q92187 359 aa3.29□□□□□ -1.88
SNHG1-220ENST00000544550 RASD2Q96D21 266 aa3.29□□□□□ -1.88
SNHG1-220ENST00000544550 CMBLQ96DG6 245 aa3.29□□□□□ -1.88
SNHG1-220ENST00000544550 ASCL2Q99929 193 aa3.29□□□□□ -1.88
SNHG1-220ENST00000544550 TMEM43Q9BTV4 400 aa3.29□□□□□ -1.88
SNHG1-220ENST00000544550 C1orf50Q9BV19 199 aa3.29□□□□□ -1.88
SNHG1-220ENST00000544550 OR2H1Q9GZK4 316 aa3.29□□□□□ -1.88
SNHG1-220ENST00000544550 TSPYL1Q9H0U9 437 aa3.29□□□□□ -1.88
SNHG1-220ENST00000544550 METTL8Q9H825 291 aaKnown RBP3.29□□□□□ -1.88
SNHG1-220ENST00000544550 ZNF702PQ9H963 129 aa3.29□□□□□ -1.88
SNHG1-220ENST00000544550 SIRT7Q9NRC8 400 aa3.29□□□□□ -1.88
SNHG1-220ENST00000544550 THUMPD1Q9NXG2 353 aaKnown RBP3.29□□□□□ -1.88
SNHG1-220ENST00000544550 KAAG1Q9UBP8 84 aa3.29□□□□□ -1.88
SNHG1-220ENST00000544550 PITPNC1Q9UKF7 332 aa3.29□□□□□ -1.88
SNHG1-220ENST00000544550 TMCC3Q9ULS5 477 aa3.29□□□□□ -1.88
SNHG1-220ENST00000544550 NOP16Q9Y3C1 178 aaKnown RBP3.29□□□□□ -1.88
SNHG1-220ENST00000544550 SAR1BQ9Y6B6 198 aa3.29□□□□□ -1.88
SNHG1-220ENST00000544550 DNAH3Q8TD57 4116 aa3.28□□□□□ -1.88
SNHG1-220ENST00000544550 A0A087WUV0 522 aaPredicted RBP3.28□□□□□ -1.88
SNHG1-220ENST00000544550 A0A0G2JPF8 293 aa3.28□□□□□ -1.88
SNHG1-220ENST00000544550 A0A1B0GWA3 101 aa3.28□□□□□ -1.88
SNHG1-220ENST00000544550 A0A1W2PRG6 482 aa3.28□□□□□ -1.88
SNHG1-220ENST00000544550 OOEPA6NGQ2 149 aa3.28□□□□□ -1.88
SNHG1-220ENST00000544550 C12orf71A8MTZ7 269 aa3.28□□□□□ -1.88
SNHG1-220ENST00000544550 HNRNPCL2B2RXH8 293 aa3.28□□□□□ -1.88
SNHG1-220ENST00000544550 HNRNPCL3B7ZW38 293 aa3.28□□□□□ -1.88
SNHG1-220ENST00000544550 M0R1W7 72 aa3.28□□□□□ -1.88
SNHG1-220ENST00000544550 DVL1O14640 695 aa3.28□□□□□ -1.88
SNHG1-220ENST00000544550 MGST3O14880 152 aa3.28□□□□□ -1.88
SNHG1-220ENST00000544550 ZSCAN12O43309 604 aa3.28□□□□□ -1.88
SNHG1-220ENST00000544550 SYNGR1O43759 233 aa3.28□□□□□ -1.88
SNHG1-220ENST00000544550 HNRNPCL1O60812 293 aaKnown RBP3.28□□□□□ -1.88
SNHG1-220ENST00000544550 GLCEO94923 617 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms