RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 CDAP32320 146 aa13.99□□□□□ -0.17
CHD4-210ENST00000544040 PDCD1Q15116 288 aa13.99□□□□□ -0.17
CHD4-210ENST00000544040 LINC00303Q3SY05 128 aa13.99□□□□□ -0.17
CHD4-210ENST00000544040 MAMSTRQ6ZN01 415 aa13.99□□□□□ -0.17
CHD4-210ENST00000544040 SMIM19Q96E16 107 aa13.99□□□□□ -0.17
CHD4-210ENST00000544040 GABARAPL1Q9H0R8 117 aa13.99□□□□□ -0.17
CHD4-210ENST00000544040 OR5V1Q9UGF6 321 aa13.99□□□□□ -0.17
CHD4-210ENST00000544040 RANP62826 216 aaKnown RBP13.99□□□□□ -0.17
CHD4-210ENST00000544040 ZXDAP98168 799 aa13.99□□□□□ -0.17
CHD4-210ENST00000544040 TEX261Q6UWH6 196 aa13.99□□□□□ -0.17
CHD4-210ENST00000544040 RPS19BP1Q86WX3 136 aaKnown RBP13.99□□□□□ -0.17
CHD4-210ENST00000544040 ZNF573Q86YE8 665 aa13.99□□□□□ -0.17
CHD4-210ENST00000544040 OR2A14Q96R47 310 aa13.99□□□□□ -0.17
CHD4-210ENST00000544040 U3KQ87 197 aa13.99□□□□□ -0.17
CHD4-210ENST00000544040 EGR3Q06889 387 aa13.99□□□□□ -0.17
CHD4-210ENST00000544040 AGERQ15109 404 aa13.99□□□□□ -0.17
CHD4-210ENST00000544040 MIDNQ504T8 468 aa13.99□□□□□ -0.17
CHD4-210ENST00000544040 FAM162BQ5T6X4 162 aa13.99□□□□□ -0.17
CHD4-210ENST00000544040 ZNF66Q6ZN08 573 aa13.99□□□□□ -0.17
CHD4-210ENST00000544040 SLC25A26Q70HW3 274 aa13.99□□□□□ -0.17
CHD4-210ENST00000544040 ZDHHC23Q8IYP9 409 aa13.99□□□□□ -0.17
CHD4-210ENST00000544040 YIPF6Q96EC8 236 aa13.99□□□□□ -0.17
CHD4-210ENST00000544040 EDEM2Q9BV94 578 aa13.99□□□□□ -0.17
CHD4-210ENST00000544040 JAM3Q9BX67 310 aa13.99□□□□□ -0.17
CHD4-210ENST00000544040 ZNF785A8K8V0 405 aa13.98□□□□□ -0.17
CHD4-210ENST00000544040 AFMIDQ63HM1 303 aa13.98□□□□□ -0.17
CHD4-210ENST00000544040 OR10V1Q8NGI7 309 aa13.98□□□□□ -0.17
CHD4-210ENST00000544040 UBALD1Q8TB05 177 aa13.98□□□□□ -0.17
CHD4-210ENST00000544040 RTN4IP1Q8WWV3 396 aaPredicted RBP13.98□□□□□ -0.17
CHD4-210ENST00000544040 P4HTMQ9NXG6 502 aa13.98□□□□□ -0.17
CHD4-210ENST00000544040 C19orf53Q9UNZ5 99 aaPredicted RBP13.98□□□□□ -0.17
CHD4-210ENST00000544040 ASB1Q9Y576 335 aa13.98□□□□□ -0.17
CHD4-210ENST00000544040 PRSS37A4D1T9 235 aa13.98□□□□□ -0.17
CHD4-210ENST00000544040 TMPRSS11DO60235 418 aa13.98□□□□□ -0.17
CHD4-210ENST00000544040 AVPR2P30518 371 aa13.98□□□□□ -0.17
CHD4-210ENST00000544040 ZNF121P58317 390 aaPredicted RBP13.98□□□□□ -0.17
CHD4-210ENST00000544040 ELAVL1Q15717 326 aaKnown RBP13.98□□□□□ -0.17
CHD4-210ENST00000544040 TMEM52BQ4KMG9 183 aa13.98□□□□□ -0.17
CHD4-210ENST00000544040 ZNF574Q6ZN55 896 aaPredicted RBP13.98□□□□□ -0.17
CHD4-210ENST00000544040 TIPARPQ7Z3E1 657 aaKnown RBP13.98□□□□□ -0.17
CHD4-210ENST00000544040 ARIH2OSQ8N7S6 290 aa13.98□□□□□ -0.17
CHD4-210ENST00000544040 EXD3Q8N9H8 876 aa13.98□□□□□ -0.17
CHD4-210ENST00000544040 SLC25A43Q8WUT9 341 aaPredicted RBP13.98□□□□□ -0.17
CHD4-210ENST00000544040 MED18Q9BUE0 208 aa13.98□□□□□ -0.17
CHD4-210ENST00000544040 DLG5Q8TDM6 1919 aa13.98□□□□□ -0.17
CHD4-210ENST00000544040 LTBP3Q9NS15 1303 aa13.98□□□□□ -0.17
CHD4-210ENST00000544040 GATCO43716 136 aaKnown RBP13.98□□□□□ -0.17
CHD4-210ENST00000544040 POU3F3P20264 500 aaPredicted RBP13.98□□□□□ -0.17
CHD4-210ENST00000544040 SIGLEC11Q96RL6 698 aa13.98□□□□□ -0.17
CHD4-210ENST00000544040 DUSP22Q9NRW4 184 aa13.98□□□□□ -0.17
CHD4-210ENST00000544040 PYCARD-AS1I3L0S3 204 aa13.98□□□□□ -0.17
CHD4-210ENST00000544040 CIDEAO60543 219 aa13.98□□□□□ -0.17
CHD4-210ENST00000544040 GALR1P47211 349 aa13.98□□□□□ -0.17
CHD4-210ENST00000544040 HIST1H3AP68431 136 aa13.98□□□□□ -0.17
CHD4-210ENST00000544040 MOB3AQ96BX8 217 aa13.98□□□□□ -0.17
CHD4-210ENST00000544040 DUS3LQ96G46 650 aaKnown RBP13.98□□□□□ -0.17
CHD4-210ENST00000544040 ADGRG7Q96K78 797 aa13.98□□□□□ -0.17
CHD4-210ENST00000544040 TECTBQ96PL2 329 aa13.98□□□□□ -0.17
CHD4-210ENST00000544040 OR2M5A3KFT3 312 aa13.98□□□□□ -0.17
CHD4-210ENST00000544040 S100A4P26447 101 aaKnown RBP13.98□□□□□ -0.17
CHD4-210ENST00000544040 GPM6AP51674 278 aa13.98□□□□□ -0.17
CHD4-210ENST00000544040 PPIAP62937 165 aaKnown RBP13.98□□□□□ -0.17
CHD4-210ENST00000544040 IFI44Q8TCB0 444 aa13.98□□□□□ -0.17
CHD4-210ENST00000544040 ASIC5Q9NY37 505 aa13.98□□□□□ -0.17
CHD4-210ENST00000544040 TTRP02766 147 aa13.98□□□□□ -0.17
CHD4-210ENST00000544040 ARR3P36575 388 aa13.98□□□□□ -0.17
CHD4-210ENST00000544040 DHODHQ02127 395 aa13.98□□□□□ -0.17
CHD4-210ENST00000544040 NHLH1Q02575 133 aa13.98□□□□□ -0.17
CHD4-210ENST00000544040 NHLH2Q02577 135 aa13.98□□□□□ -0.17
CHD4-210ENST00000544040 CDK5R1Q15078 307 aa13.98□□□□□ -0.17
CHD4-210ENST00000544040 SP6Q3SY56 376 aa13.98□□□□□ -0.17
CHD4-210ENST00000544040 METRNLQ641Q3 311 aa13.98□□□□□ -0.17
CHD4-210ENST00000544040 KCND3Q9UK17 655 aa13.98□□□□□ -0.17
CHD4-210ENST00000544040 F11P03951 625 aa13.97□□□□□ -0.17
CHD4-210ENST00000544040 CD1EP15812 388 aa13.97□□□□□ -0.17
CHD4-210ENST00000544040 IRS1P35568 1242 aa13.97□□□□□ -0.17
CHD4-210ENST00000544040 SNRPEP62304 92 aaKnown RBP13.97□□□□□ -0.17
CHD4-210ENST00000544040 CEBPEQ15744 281 aa13.97□□□□□ -0.17
CHD4-210ENST00000544040 EMC4Q5J8M3 183 aa13.97□□□□□ -0.17
CHD4-210ENST00000544040 FBXO46Q6PJ61 603 aaPredicted RBP13.97□□□□□ -0.17
CHD4-210ENST00000544040 DHRS11Q6UWP2 260 aa13.97□□□□□ -0.17
CHD4-210ENST00000544040 CPEB3Q8NE35 698 aaKnown RBP13.97□□□□□ -0.17
CHD4-210ENST00000544040 OR52N5Q8NH56 324 aa13.97□□□□□ -0.17
CHD4-210ENST00000544040 OR2T6Q8NHC8 308 aa13.97□□□□□ -0.17
CHD4-210ENST00000544040 MENTQ9BUN1 341 aa13.97□□□□□ -0.17
CHD4-210ENST00000544040 SLC17A1Q14916 467 aa13.97□□□□□ -0.17
CHD4-210ENST00000544040 TMEM97Q5BJF2 176 aa13.97□□□□□ -0.17
CHD4-210ENST00000544040 C6orf15Q6UXA7 325 aaPredicted RBP13.97□□□□□ -0.17
CHD4-210ENST00000544040 VASH2Q86V25 355 aa13.97□□□□□ -0.17
CHD4-210ENST00000544040 SLC38A6Q8IZM9 456 aa13.97□□□□□ -0.17
CHD4-210ENST00000544040 SARGQ9BW04 601 aa13.97□□□□□ -0.17
CHD4-210ENST00000544040 S1PR5Q9H228 398 aa13.97□□□□□ -0.17
CHD4-210ENST00000544040 TRAPPC4Q9Y296 219 aa13.97□□□□□ -0.17
CHD4-210ENST00000544040 NAV1Q8NEY1 1877 aa13.97□□□□□ -0.17
CHD4-210ENST00000544040 TCRBV5S2A0A599 114 aa13.97□□□□□ -0.17
CHD4-210ENST00000544040 MEX3AA1L020 520 aaKnown RBP13.97□□□□□ -0.17
CHD4-210ENST00000544040 SNRPGP15A8MWD9 76 aa13.97□□□□□ -0.17
CHD4-210ENST00000544040 KIAA1324LA8MWY0 1029 aaPredicted RBP13.97□□□□□ -0.17
CHD4-210ENST00000544040 ZBTB42B2RXF5 422 aa13.97□□□□□ -0.17
CHD4-210ENST00000544040 RBP4P02753 201 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms