RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, human

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX11-223	ENST00000542838	RAB3C	Q96E17	227 aa		11.48	□□□□□ -0.57
DDX11-223	ENST00000542838	C5orf34	Q96MH7	638 aa		11.48	□□□□□ -0.57
DDX11-223	ENST00000542838	CMSS1	Q9BQ75	279 aa	Known RBP	11.48	□□□□□ -0.57
DDX11-223	ENST00000542838	NUDT16L1	Q9BRJ7	211 aa	Known RBP	11.48	□□□□□ -0.57
DDX11-223	ENST00000542838	EMC6	Q9BV81	110 aa		11.48	□□□□□ -0.57
DDX11-223	ENST00000542838	TMEM106C	Q9BVX2	250 aa		11.48	□□□□□ -0.57
DDX11-223	ENST00000542838	IFT22	Q9H7X7	185 aa		11.48	□□□□□ -0.57
DDX11-223	ENST00000542838	METTL8	Q9H825	291 aa	Known RBP	11.48	□□□□□ -0.57
DDX11-223	ENST00000542838	RHOF	Q9HBH0	211 aa		11.48	□□□□□ -0.57
DDX11-223	ENST00000542838	RAB18	Q9NP72	206 aa		11.48	□□□□□ -0.57
DDX11-223	ENST00000542838	CTSF	Q9UBX1	484 aa		11.48	□□□□□ -0.57
DDX11-223	ENST00000542838	MRPS28	Q9Y2Q9	187 aa	Known RBP	11.48	□□□□□ -0.57
DDX11-223	ENST00000542838	TLCD2	A6NGC4	264 aa		11.47	□□□□□ -0.57
DDX11-223	ENST00000542838	CRYBA1	P05813	215 aa		11.47	□□□□□ -0.57
DDX11-223	ENST00000542838	SPP1	P10451	314 aa		11.47	□□□□□ -0.57
DDX11-223	ENST00000542838	BCKDHB	P21953	392 aa		11.47	□□□□□ -0.57
DDX11-223	ENST00000542838	NFYB	P25208	207 aa		11.47	□□□□□ -0.57
DDX11-223	ENST00000542838	FASLG	P48023	281 aa		11.47	□□□□□ -0.57
DDX11-223	ENST00000542838	SLC6A9	P48067	706 aa		11.47	□□□□□ -0.57
DDX11-223	ENST00000542838	PLAC9	Q5JTB6	97 aa		11.47	□□□□□ -0.57
DDX11-223	ENST00000542838	AVPI1	Q5T686	147 aa		11.47	□□□□□ -0.57
DDX11-223	ENST00000542838	ZFP82	Q8N141	532 aa		11.47	□□□□□ -0.57
DDX11-223	ENST00000542838	TMEM104	Q8NE00	496 aa		11.47	□□□□□ -0.57
DDX11-223	ENST00000542838	OR51E1	Q8TCB6	317 aa		11.47	□□□□□ -0.57
DDX11-223	ENST00000542838	RXFP4	Q8TDU9	374 aa		11.47	□□□□□ -0.57
DDX11-223	ENST00000542838	GLYATL2	Q8WU03	294 aa		11.47	□□□□□ -0.57
DDX11-223	ENST00000542838	USB1	Q9BQ65	265 aa	Known RBP	11.47	□□□□□ -0.57
DDX11-223	ENST00000542838	NRIP2	Q9BQI9	281 aa		11.47	□□□□□ -0.57
DDX11-223	ENST00000542838	BANF2	Q9H503	90 aa		11.47	□□□□□ -0.57
DDX11-223	ENST00000542838	MBTPS2	O43462	519 aa		11.47	□□□□□ -0.57
DDX11-223	ENST00000542838	MUC1	P15941	1255 aa	Predicted RBP	11.47	□□□□□ -0.57
DDX11-223	ENST00000542838	FOXK1	P85037	733 aa		11.47	□□□□□ -0.57
DDX11-223	ENST00000542838	HSF1	Q00613	529 aa		11.47	□□□□□ -0.57
DDX11-223	ENST00000542838	TLE3	Q04726	772 aa		11.47	□□□□□ -0.57
DDX11-223	ENST00000542838	ZP4	Q12836	540 aa		11.47	□□□□□ -0.57
DDX11-223	ENST00000542838	COMMD2	Q86X83	199 aa		11.47	□□□□□ -0.57
DDX11-223	ENST00000542838	ARRDC1	Q8N5I2	433 aa		11.47	□□□□□ -0.57
DDX11-223	ENST00000542838	TMEM234	Q8WY98	164 aa		11.47	□□□□□ -0.57
DDX11-223	ENST00000542838	FBLN5	Q9UBX5	448 aa		11.47	□□□□□ -0.57
DDX11-223	ENST00000542838	GSTP1	P09211	210 aa	Known RBP	11.46	□□□□□ -0.57
DDX11-223	ENST00000542838	KCNJ3	P48549	501 aa		11.46	□□□□□ -0.57
DDX11-223	ENST00000542838	CCR5	P51681	352 aa		11.46	□□□□□ -0.57
DDX11-223	ENST00000542838	RAB32	Q13637	225 aa		11.46	□□□□□ -0.57
DDX11-223	ENST00000542838	ANKRD55	Q3KP44	614 aa		11.46	□□□□□ -0.57
DDX11-223	ENST00000542838	ACTBL2	Q562R1	376 aa		11.46	□□□□□ -0.57
DDX11-223	ENST00000542838	VAX1	Q5SQQ9	334 aa		11.46	□□□□□ -0.57
DDX11-223	ENST00000542838	OR51F2	Q8NH61	342 aa		11.46	□□□□□ -0.57
DDX11-223	ENST00000542838	ADAMTS17	Q8TE56	1095 aa		11.46	□□□□□ -0.57
DDX11-223	ENST00000542838	CYYR1	Q96J86	154 aa		11.46	□□□□□ -0.57
DDX11-223	ENST00000542838	OR10C1	Q96KK4	312 aa		11.46	□□□□□ -0.57
DDX11-223	ENST00000542838	PQLC2L	A1A4F0	135 aa		11.46	□□□□□ -0.57
DDX11-223	ENST00000542838	LYL1	P12980	280 aa		11.46	□□□□□ -0.57
DDX11-223	ENST00000542838	HIST1H1D	P16402	221 aa	Known RBP	11.46	□□□□□ -0.57
DDX11-223	ENST00000542838	NAA40	Q86UY6	237 aa		11.46	□□□□□ -0.57
DDX11-223	ENST00000542838	C7orf61	Q8IZ16	206 aa		11.46	□□□□□ -0.57
DDX11-223	ENST00000542838	OR10S1	Q8NGN2	331 aa		11.46	□□□□□ -0.57
DDX11-223	ENST00000542838	OR1N1	Q8NGS0	311 aa		11.46	□□□□□ -0.57
DDX11-223	ENST00000542838	OR5H2	Q8NGV7	314 aa		11.46	□□□□□ -0.57
DDX11-223	ENST00000542838	AQP10	Q96PS8	301 aa		11.46	□□□□□ -0.57
DDX11-223	ENST00000542838	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	11.46	□□□□□ -0.57
DDX11-223	ENST00000542838	ACKR4	Q9NPB9	350 aa		11.46	□□□□□ -0.57
DDX11-223	ENST00000542838	GPR27	Q9NS67	375 aa		11.46	□□□□□ -0.57
DDX11-223	ENST00000542838	RCC2	Q9P258	522 aa	Known RBP	11.46	□□□□□ -0.57
DDX11-223	ENST00000542838	COL5A1	P20908	1838 aa	Predicted RBP	11.46	□□□□□ -0.57
DDX11-223	ENST00000542838		A0A1W2PP11	408 aa		11.46	□□□□□ -0.58
DDX11-223	ENST00000542838	LILRA5	A6NI73	299 aa		11.46	□□□□□ -0.58
DDX11-223	ENST00000542838	CDC14B	O60729	498 aa		11.46	□□□□□ -0.58
DDX11-223	ENST00000542838	ZNF354A	O60765	605 aa	Predicted RBP	11.46	□□□□□ -0.58
DDX11-223	ENST00000542838	RAD51D	O75771	328 aa		11.46	□□□□□ -0.58
DDX11-223	ENST00000542838	FPR2	P25090	351 aa		11.46	□□□□□ -0.58
DDX11-223	ENST00000542838	OR3A4P	P47883	348 aa		11.46	□□□□□ -0.58
DDX11-223	ENST00000542838	CAV2	P51636	162 aa		11.46	□□□□□ -0.58
DDX11-223	ENST00000542838	BID	P55957	195 aa		11.46	□□□□□ -0.58
DDX11-223	ENST00000542838	S100A10	P60903	97 aa		11.46	□□□□□ -0.58
DDX11-223	ENST00000542838	SUPT4H1	P63272	117 aa	Known RBP	11.46	□□□□□ -0.58
DDX11-223	ENST00000542838	ZNF529	Q6P280	563 aa		11.46	□□□□□ -0.58
DDX11-223	ENST00000542838	MFSD8	Q8NHS3	518 aa		11.46	□□□□□ -0.58
DDX11-223	ENST00000542838	LMX1A	Q8TE12	382 aa		11.46	□□□□□ -0.58
DDX11-223	ENST00000542838	SAT2	Q96F10	170 aa	Predicted RBP	11.46	□□□□□ -0.58
DDX11-223	ENST00000542838	SCGB3A2	Q96PL1	93 aa		11.46	□□□□□ -0.58
DDX11-223	ENST00000542838	CHST11	Q9NPF2	352 aa		11.46	□□□□□ -0.58
DDX11-223	ENST00000542838	GSKIP	Q9P0R6	139 aa		11.46	□□□□□ -0.58
DDX11-223	ENST00000542838	SRPK3	Q9UPE1	567 aa		11.46	□□□□□ -0.58
DDX11-223	ENST00000542838	CSTB	P04080	98 aa	Known RBP	11.45	□□□□□ -0.58
DDX11-223	ENST00000542838	AMY2B	P19961	511 aa		11.45	□□□□□ -0.58
DDX11-223	ENST00000542838	TMEM50B	P56557	158 aa		11.45	□□□□□ -0.58
DDX11-223	ENST00000542838	HYAL1	Q12794	435 aa		11.45	□□□□□ -0.58
DDX11-223	ENST00000542838	ARFRP1	Q13795	201 aa		11.45	□□□□□ -0.58
DDX11-223	ENST00000542838	KCNG3	Q8TAE7	436 aa		11.45	□□□□□ -0.58
DDX11-223	ENST00000542838	C2orf50	Q96LR7	162 aa		11.45	□□□□□ -0.58
DDX11-223	ENST00000542838	NUDT22	Q9BRQ3	303 aa		11.45	□□□□□ -0.58
DDX11-223	ENST00000542838	RTBDN	Q9BSG5	229 aa	Predicted RBP	11.45	□□□□□ -0.58
DDX11-223	ENST00000542838	SOX7	Q9BT81	388 aa		11.45	□□□□□ -0.58
DDX11-223	ENST00000542838	TMEM59	Q9BXS4	323 aa		11.45	□□□□□ -0.58
DDX11-223	ENST00000542838	SLC5A7	Q9GZV3	580 aa		11.45	□□□□□ -0.58
DDX11-223	ENST00000542838	MMP17	Q9ULZ9	603 aa		11.45	□□□□□ -0.58
DDX11-223	ENST00000542838	ANAPC10	Q9UM13	185 aa		11.45	□□□□□ -0.58
DDX11-223	ENST00000542838	VDAC3	Q9Y277	283 aa		11.45	□□□□□ -0.58
DDX11-223	ENST00000542838	WIF1	Q9Y5W5	379 aa		11.45	□□□□□ -0.58
DDX11-223	ENST00000542838	MEX3A	A1L020	520 aa	Known RBP	11.45	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 11 ms