RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, human

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC2-223	ENST00000542552	LRRC28	Q86X40	367 aa	Predicted RBP	13.01	□□□□□ -0.33
ECHDC2-223	ENST00000542552	TMEM186	Q96B77	213 aa		13.01	□□□□□ -0.33
ECHDC2-223	ENST00000542552	RAB39B	Q96DA2	213 aa		13.01	□□□□□ -0.33
ECHDC2-223	ENST00000542552	RBM4B	Q9BQ04	359 aa	Known RBP	13.01	□□□□□ -0.33
ECHDC2-223	ENST00000542552	N6AMT1	Q9Y5N5	214 aa		13.01	□□□□□ -0.33
ECHDC2-223	ENST00000542552	GGT3P	A6NGU5	568 aa		13	□□□□□ -0.33
ECHDC2-223	ENST00000542552	FSTL3	O95633	263 aa		13	□□□□□ -0.33
ECHDC2-223	ENST00000542552	ALPL	P05186	524 aa		13	□□□□□ -0.33
ECHDC2-223	ENST00000542552	ANPEP	P15144	967 aa		13	□□□□□ -0.33
ECHDC2-223	ENST00000542552	DDOST	P39656	456 aa		13	□□□□□ -0.33
ECHDC2-223	ENST00000542552	PMEL	P40967	661 aa		13	□□□□□ -0.33
ECHDC2-223	ENST00000542552	RAD23A	P54725	363 aa		13	□□□□□ -0.33
ECHDC2-223	ENST00000542552	BTG1	P62324	171 aa		13	□□□□□ -0.33
ECHDC2-223	ENST00000542552	FAM3A	P98173	230 aa		13	□□□□□ -0.33
ECHDC2-223	ENST00000542552	ROM1	Q03395	351 aa		13	□□□□□ -0.33
ECHDC2-223	ENST00000542552	TMEM155	Q4W5P6	130 aa		13	□□□□□ -0.33
ECHDC2-223	ENST00000542552	LRRN1	Q6UXK5	716 aa		13	□□□□□ -0.33
ECHDC2-223	ENST00000542552	FAM57B	Q71RH2	274 aa		13	□□□□□ -0.33
ECHDC2-223	ENST00000542552	GLCCI1	Q86VQ1	547 aa		13	□□□□□ -0.33
ECHDC2-223	ENST00000542552	HIST2H2AB	Q8IUE6	130 aa	Predicted RBP	13	□□□□□ -0.33
ECHDC2-223	ENST00000542552	C10orf67	Q8IYJ2	551 aa		13	□□□□□ -0.33
ECHDC2-223	ENST00000542552	OR51F2	Q8NH61	342 aa		13	□□□□□ -0.33
ECHDC2-223	ENST00000542552	ZNF420	Q8TAQ5	688 aa	Predicted RBP	13	□□□□□ -0.33
ECHDC2-223	ENST00000542552	REEP6	Q96HR9	211 aa		13	□□□□□ -0.33
ECHDC2-223	ENST00000542552	GAL3ST1	Q99999	423 aa		13	□□□□□ -0.33
ECHDC2-223	ENST00000542552	NIPAL2	Q9H841	368 aa		13	□□□□□ -0.33
ECHDC2-223	ENST00000542552	HIF1AN	Q9NWT6	349 aa		13	□□□□□ -0.33
ECHDC2-223	ENST00000542552	HAO2	Q9NYQ3	351 aa		13	□□□□□ -0.33
ECHDC2-223	ENST00000542552	USE1	Q9NZ43	259 aa		13	□□□□□ -0.33
ECHDC2-223	ENST00000542552	DNAJC27	Q9NZQ0	273 aa		13	□□□□□ -0.33
ECHDC2-223	ENST00000542552	LAMP5	Q9UJQ1	280 aa		13	□□□□□ -0.33
ECHDC2-223	ENST00000542552	NOP16	Q9Y3C1	178 aa	Known RBP	13	□□□□□ -0.33
ECHDC2-223	ENST00000542552	TRAV20	A0A0B4J274	112 aa		12.99	□□□□□ -0.33
ECHDC2-223	ENST00000542552	hCG_38984	A0A1B0GV85	526 aa		12.99	□□□□□ -0.33
ECHDC2-223	ENST00000542552	SLC22A31	A6NKX4	558 aa		12.99	□□□□□ -0.33
ECHDC2-223	ENST00000542552	PRR32	B1ATL7	298 aa		12.99	□□□□□ -0.33
ECHDC2-223	ENST00000542552		E9PQ18	207 aa		12.99	□□□□□ -0.33
ECHDC2-223	ENST00000542552	TBX1	O43435	398 aa		12.99	□□□□□ -0.33
ECHDC2-223	ENST00000542552	PLPP2	O43688	288 aa		12.99	□□□□□ -0.33
ECHDC2-223	ENST00000542552	MRPL3	P09001	348 aa	Known RBP	12.99	□□□□□ -0.33
ECHDC2-223	ENST00000542552	SBK2	P0C263	348 aa		12.99	□□□□□ -0.33
ECHDC2-223	ENST00000542552	HNF1A	P20823	631 aa		12.99	□□□□□ -0.33
ECHDC2-223	ENST00000542552	PCMT1	P22061	227 aa		12.99	□□□□□ -0.33
ECHDC2-223	ENST00000542552	THBS2	P35442	1172 aa		12.99	□□□□□ -0.33
ECHDC2-223	ENST00000542552	PSMA6	P60900	246 aa	Known RBP	12.99	□□□□□ -0.33
ECHDC2-223	ENST00000542552	OR8G1	Q15617	311 aa		12.99	□□□□□ -0.33
ECHDC2-223	ENST00000542552	TIGD6	Q17RP2	521 aa		12.99	□□□□□ -0.33
ECHDC2-223	ENST00000542552	IL17REL	Q6ZVW7	336 aa		12.99	□□□□□ -0.33
ECHDC2-223	ENST00000542552	MOGAT3	Q86VF5	341 aa		12.99	□□□□□ -0.33
ECHDC2-223	ENST00000542552	KLB	Q86Z14	1044 aa		12.99	□□□□□ -0.33
ECHDC2-223	ENST00000542552	OR56B2P	Q8NGI1	322 aa		12.99	□□□□□ -0.33
ECHDC2-223	ENST00000542552		Q8TCH9	128 aa		12.99	□□□□□ -0.33
ECHDC2-223	ENST00000542552	ERGIC1	Q969X5	290 aa		12.99	□□□□□ -0.33
ECHDC2-223	ENST00000542552	IL4I1	Q96RQ9	567 aa		12.99	□□□□□ -0.33
ECHDC2-223	ENST00000542552	OR10A2	Q9H208	303 aa		12.99	□□□□□ -0.33
ECHDC2-223	ENST00000542552	RGCC	Q9H4X1	137 aa		12.99	□□□□□ -0.33
ECHDC2-223	ENST00000542552	LPAR2	Q9HBW0	351 aa		12.99	□□□□□ -0.33
ECHDC2-223	ENST00000542552	G6PC2	Q9NQR9	355 aa		12.99	□□□□□ -0.33
ECHDC2-223	ENST00000542552	COPS3	Q9UNS2	423 aa		12.99	□□□□□ -0.33
ECHDC2-223	ENST00000542552	LRP12	Q9Y561	859 aa		12.99	□□□□□ -0.33
ECHDC2-223	ENST00000542552	TMEM14A	Q9Y6G1	99 aa		12.99	□□□□□ -0.33
ECHDC2-223	ENST00000542552	IGHV3-64D	A0A0J9YX35	117 aa		12.98	□□□□□ -0.33
ECHDC2-223	ENST00000542552	ISPD	A4D126	451 aa		12.98	□□□□□ -0.33
ECHDC2-223	ENST00000542552		F5H0A9	414 aa	Predicted RBP	12.98	□□□□□ -0.33
ECHDC2-223	ENST00000542552	CFL1	P23528	166 aa	Known RBP	12.98	□□□□□ -0.33
ECHDC2-223	ENST00000542552	DCTD	P32321	178 aa		12.98	□□□□□ -0.33
ECHDC2-223	ENST00000542552	GSK3A	P49840	483 aa		12.98	□□□□□ -0.33
ECHDC2-223	ENST00000542552	OR8B8	Q15620	311 aa		12.98	□□□□□ -0.33
ECHDC2-223	ENST00000542552	KCTD18	Q6PI47	426 aa	Predicted RBP	12.98	□□□□□ -0.33
ECHDC2-223	ENST00000542552	GID4	Q8IVV7	300 aa		12.98	□□□□□ -0.33
ECHDC2-223	ENST00000542552	SPIC	Q8N5J4	248 aa		12.98	□□□□□ -0.33
ECHDC2-223	ENST00000542552	SPERT	Q8NA61	448 aa		12.98	□□□□□ -0.33
ECHDC2-223	ENST00000542552	PLPP7	Q8NBV4	271 aa		12.98	□□□□□ -0.33
ECHDC2-223	ENST00000542552	ASB17	Q8WXJ9	295 aa		12.98	□□□□□ -0.33
ECHDC2-223	ENST00000542552	PGAM5	Q96HS1	289 aa		12.98	□□□□□ -0.33
ECHDC2-223	ENST00000542552	RAB3IP	Q96QF0	476 aa	Predicted RBP	12.98	□□□□□ -0.33
ECHDC2-223	ENST00000542552	CNN2	Q99439	309 aa	Known RBP	12.98	□□□□□ -0.33
ECHDC2-223	ENST00000542552	ADAT1	Q9BUB4	502 aa	Known RBP	12.98	□□□□□ -0.33
ECHDC2-223	ENST00000542552	RIBC2	Q9H4K1	309 aa		12.98	□□□□□ -0.33
ECHDC2-223	ENST00000542552	PATZ1	Q9HBE1	687 aa	Known RBP	12.98	□□□□□ -0.33
ECHDC2-223	ENST00000542552	ADGRL4	Q9HBW9	690 aa		12.98	□□□□□ -0.33
ECHDC2-223	ENST00000542552	TMEM165	Q9HC07	324 aa		12.98	□□□□□ -0.33
ECHDC2-223	ENST00000542552	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	12.98	□□□□□ -0.33
ECHDC2-223	ENST00000542552	H2AFY2	Q9P0M6	372 aa	Predicted RBP	12.98	□□□□□ -0.33
ECHDC2-223	ENST00000542552	ARHGAP32	A7KAX9	2087 aa		12.97	□□□□□ -0.33
ECHDC2-223	ENST00000542552	ACOD1	A6NK06	481 aa		12.97	□□□□□ -0.33
ECHDC2-223	ENST00000542552	LRRC30	A6NM36	301 aa		12.97	□□□□□ -0.33
ECHDC2-223	ENST00000542552	EI24	O14681	340 aa		12.97	□□□□□ -0.33
ECHDC2-223	ENST00000542552	ZNF254	O75437	659 aa		12.97	□□□□□ -0.33
ECHDC2-223	ENST00000542552	CYB5R3	P00387	301 aa	Predicted RBP	12.97	□□□□□ -0.33
ECHDC2-223	ENST00000542552	IFNA2	P01563	188 aa		12.97	□□□□□ -0.33
ECHDC2-223	ENST00000542552	SRD5A1	P18405	259 aa		12.97	□□□□□ -0.33
ECHDC2-223	ENST00000542552	MDH2	P40926	338 aa	Known RBP	12.97	□□□□□ -0.33
ECHDC2-223	ENST00000542552	MPPED2	Q15777	294 aa		12.97	□□□□□ -0.33
ECHDC2-223	ENST00000542552	KRT77	Q7Z794	578 aa		12.97	□□□□□ -0.33
ECHDC2-223	ENST00000542552	ZNF679	Q8IYX0	411 aa		12.97	□□□□□ -0.33
ECHDC2-223	ENST00000542552	RFLNB	Q8N5W9	214 aa		12.97	□□□□□ -0.33
ECHDC2-223	ENST00000542552	OR8J1	Q8NGP2	316 aa		12.97	□□□□□ -0.33
ECHDC2-223	ENST00000542552	OR8B4	Q96RC9	309 aa		12.97	□□□□□ -0.33
ECHDC2-223	ENST00000542552	MNT	Q99583	582 aa		12.97	□□□□□ -0.33

Retrieved 100 of 20,778 RNA–protein pairs in 47 ms