RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 OR8J1Q8NGP2 316 aa8.2□□□□□ -1.1
YBX3-212ENST00000542002 SPRYD4Q8WW59 207 aaPredicted RBP8.2□□□□□ -1.1
YBX3-212ENST00000542002 HPS1Q92902 700 aa8.2□□□□□ -1.1
YBX3-212ENST00000542002 REEP6Q96HR9 211 aa8.2□□□□□ -1.1
YBX3-212ENST00000542002 FAM206AQ9NX38 181 aa8.2□□□□□ -1.1
YBX3-212ENST00000542002 H2AFY2Q9P0M6 372 aaPredicted RBP8.2□□□□□ -1.1
YBX3-212ENST00000542002 PPP1R3CQ9UQK1 317 aa8.2□□□□□ -1.1
YBX3-212ENST00000542002 CHD3Q12873 2000 aaKnown RBP8.2□□□□□ -1.1
YBX3-212ENST00000542002 YLPM1P49750 1951 aaKnown RBP8.19□□□□□ -1.1
YBX3-212ENST00000542002 hCG_38984A0A1B0GV85 526 aa8.19□□□□□ -1.1
YBX3-212ENST00000542002 GGT3PA6NGU5 568 aa8.19□□□□□ -1.1
YBX3-212ENST00000542002 SLC22A31A6NKX4 558 aa8.19□□□□□ -1.1
YBX3-212ENST00000542002 CLDN25C9JDP6 229 aa8.19□□□□□ -1.1
YBX3-212ENST00000542002 TMEM178BH3BS89 294 aa8.19□□□□□ -1.1
YBX3-212ENST00000542002 CYB5R3P00387 301 aaPredicted RBP8.19□□□□□ -1.1
YBX3-212ENST00000542002 IGHV2-70P01814 119 aa8.19□□□□□ -1.1
YBX3-212ENST00000542002 SBK2P0C263 348 aa8.19□□□□□ -1.1
YBX3-212ENST00000542002 GABRB1P18505 474 aa8.19□□□□□ -1.1
YBX3-212ENST00000542002 TNFSF4P23510 183 aa8.19□□□□□ -1.1
YBX3-212ENST00000542002 ACKR3P25106 362 aa8.19□□□□□ -1.1
YBX3-212ENST00000542002 GSK3AP49840 483 aa8.19□□□□□ -1.1
YBX3-212ENST00000542002 MMP16P51512 607 aa8.19□□□□□ -1.1
YBX3-212ENST00000542002 RAD23AP54725 363 aa8.19□□□□□ -1.1
YBX3-212ENST00000542002 CDH15P55291 814 aa8.19□□□□□ -1.1
YBX3-212ENST00000542002 CXCR4P61073 352 aa8.19□□□□□ -1.1
YBX3-212ENST00000542002 MFGE8Q08431 387 aaPredicted RBP8.19□□□□□ -1.1
YBX3-212ENST00000542002 ZMYND11Q15326 602 aa8.19□□□□□ -1.1
YBX3-212ENST00000542002 SLC25A30Q5SVS4 291 aa8.19□□□□□ -1.1
YBX3-212ENST00000542002 ZNF684Q5T5D7 378 aa8.19□□□□□ -1.1
YBX3-212ENST00000542002 LCN1P1Q5VSP4 162 aa8.19□□□□□ -1.1
YBX3-212ENST00000542002 PRAMEF6Q5VXH4 476 aa8.19□□□□□ -1.1
YBX3-212ENST00000542002 PLEKHG7Q6ZR37 379 aa8.19□□□□□ -1.1
YBX3-212ENST00000542002 ZBTB49Q6ZSB9 765 aa8.19□□□□□ -1.1
YBX3-212ENST00000542002 KRT77Q7Z794 578 aa8.19□□□□□ -1.1
YBX3-212ENST00000542002 MOGAT3Q86VF5 341 aa8.19□□□□□ -1.1
YBX3-212ENST00000542002 C11orf53Q8IXP5 236 aa8.19□□□□□ -1.1
YBX3-212ENST00000542002 SLC35F2Q8IXU6 374 aa8.19□□□□□ -1.1
YBX3-212ENST00000542002 ZNF679Q8IYX0 411 aa8.19□□□□□ -1.1
YBX3-212ENST00000542002 LINC01356Q8N9X3 169 aa8.19□□□□□ -1.1
YBX3-212ENST00000542002 OR8B12Q8NGG6 310 aa8.19□□□□□ -1.1
YBX3-212ENST00000542002 OR56B2PQ8NGI1 322 aa8.19□□□□□ -1.1
YBX3-212ENST00000542002 OR52H1Q8NGJ2 320 aa8.19□□□□□ -1.1
YBX3-212ENST00000542002 OR51G2Q8NGK0 314 aa8.19□□□□□ -1.1
YBX3-212ENST00000542002 FAM81AQ8TBF8 368 aa8.19□□□□□ -1.1
YBX3-212ENST00000542002 PGAM5Q96HS1 289 aa8.19□□□□□ -1.1
YBX3-212ENST00000542002 OR8B4Q96RC9 309 aa8.19□□□□□ -1.1
YBX3-212ENST00000542002 CNN2Q99439 309 aaKnown RBP8.19□□□□□ -1.1
YBX3-212ENST00000542002 C9orf16Q9BUW7 83 aa8.19□□□□□ -1.1
YBX3-212ENST00000542002 PRRG3Q9BZD7 231 aa8.19□□□□□ -1.1
YBX3-212ENST00000542002 LPAR2Q9HBW0 351 aa8.19□□□□□ -1.1
YBX3-212ENST00000542002 FAM118AQ9NWS6 357 aa8.19□□□□□ -1.1
YBX3-212ENST00000542002 CLN6Q9NWW5 311 aa8.19□□□□□ -1.1
YBX3-212ENST00000542002 WARS2Q9UGM6 360 aaKnown RBP8.19□□□□□ -1.1
YBX3-212ENST00000542002 ENOPH1Q9UHY7 261 aa8.19□□□□□ -1.1
YBX3-212ENST00000542002 MRM2Q9UI43 246 aaKnown RBP8.19□□□□□ -1.1
YBX3-212ENST00000542002 RHBDD3Q9Y3P4 386 aa8.19□□□□□ -1.1
YBX3-212ENST00000542002 NPTNQ9Y639 398 aa8.19□□□□□ -1.1
YBX3-212ENST00000542002 NSD1Q96L73 2696 aaPredicted RBP8.19□□□□□ -1.1
YBX3-212ENST00000542002 ABCA1O95477 2261 aa8.19□□□□□ -1.1
YBX3-212ENST00000542002 TLN2Q9Y4G6 2542 aa8.19□□□□□ -1.1
YBX3-212ENST00000542002 TMEM269A0A1B0GVZ9 245 aa8.18□□□□□ -1.1
YBX3-212ENST00000542002 A0A1W2PQL4 384 aaPredicted RBP8.18□□□□□ -1.1
YBX3-212ENST00000542002 C3orf80F5H4A9 247 aa8.18□□□□□ -1.1
YBX3-212ENST00000542002 J3QRE1 110 aa8.18□□□□□ -1.1
YBX3-212ENST00000542002 XRCC2O43543 280 aa8.18□□□□□ -1.1
YBX3-212ENST00000542002 GMDSO60547 372 aa8.18□□□□□ -1.1
YBX3-212ENST00000542002 LMX1BO60663 402 aa8.18□□□□□ -1.1
YBX3-212ENST00000542002 PTBP3O95758 552 aaKnown RBP8.18□□□□□ -1.1
YBX3-212ENST00000542002 IGHV2-5P01817 119 aa8.18□□□□□ -1.1
YBX3-212ENST00000542002 TNFRSF1AP19438 455 aa8.18□□□□□ -1.1
YBX3-212ENST00000542002 ZFP36P26651 326 aaKnown RBP8.18□□□□□ -1.1
YBX3-212ENST00000542002 CD200P41217 278 aa8.18□□□□□ -1.1
YBX3-212ENST00000542002 GATA4P43694 442 aa8.18□□□□□ -1.1
YBX3-212ENST00000542002 SNRPGP62308 76 aaKnown RBP8.18□□□□□ -1.1
YBX3-212ENST00000542002 OR8G1Q15617 311 aa8.18□□□□□ -1.1
YBX3-212ENST00000542002 ZSCAN26Q16670 478 aa8.18□□□□□ -1.1
YBX3-212ENST00000542002 TIGD6Q17RP2 521 aa8.18□□□□□ -1.1
YBX3-212ENST00000542002 GFOD2Q3B7J2 385 aa8.18□□□□□ -1.1
YBX3-212ENST00000542002 LPCAT4Q643R3 524 aa8.18□□□□□ -1.1
YBX3-212ENST00000542002 DEGS2Q6QHC5 323 aa8.18□□□□□ -1.1
YBX3-212ENST00000542002 ZNF322Q6U7Q0 402 aaPredicted RBP8.18□□□□□ -1.1
YBX3-212ENST00000542002 IL17RELQ6ZVW7 336 aa8.18□□□□□ -1.1
YBX3-212ENST00000542002 WDR86Q86TI4 376 aa8.18□□□□□ -1.1
YBX3-212ENST00000542002 LRRC28Q86X40 367 aaPredicted RBP8.18□□□□□ -1.1
YBX3-212ENST00000542002 GID4Q8IVV7 300 aa8.18□□□□□ -1.1
YBX3-212ENST00000542002 ENTHD1Q8IYW4 607 aa8.18□□□□□ -1.1
YBX3-212ENST00000542002 TRUB1Q8WWH5 349 aaKnown RBP8.18□□□□□ -1.1
YBX3-212ENST00000542002 ASB17Q8WXJ9 295 aa8.18□□□□□ -1.1
YBX3-212ENST00000542002 RAB1CQ92928 201 aa8.18□□□□□ -1.1
YBX3-212ENST00000542002 TBX5Q99593 518 aa8.18□□□□□ -1.1
YBX3-212ENST00000542002 MROQ9BYG7 248 aa8.18□□□□□ -1.1
YBX3-212ENST00000542002 FGF23Q9GZV9 251 aaPredicted RBP8.18□□□□□ -1.1
YBX3-212ENST00000542002 PBOV1Q9GZY1 135 aa8.18□□□□□ -1.1
YBX3-212ENST00000542002 OR10A2Q9H208 303 aa8.18□□□□□ -1.1
YBX3-212ENST00000542002 ZNF665Q9H7R5 613 aa8.18□□□□□ -1.1
YBX3-212ENST00000542002 TMEM165Q9HC07 324 aa8.18□□□□□ -1.1
YBX3-212ENST00000542002 G6PC2Q9NQR9 355 aa8.18□□□□□ -1.1
YBX3-212ENST00000542002 UFSP2Q9NUQ7 469 aa8.18□□□□□ -1.1
YBX3-212ENST00000542002 MRPL15Q9P015 296 aaKnown RBP8.18□□□□□ -1.1
YBX3-212ENST00000542002 HIVEP2P31629 2446 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms