RNA–Protein interactions for RNA: ENST00000541204.5

RNF4-222, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 2,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-222ENST00000541204 OR5L2Q8NGL0 311 aa11.11□□□□□ -0.63
RNF4-222ENST00000541204 MITD1Q8WV92 249 aa11.11□□□□□ -0.63
RNF4-222ENST00000541204 MR1Q95460 341 aa11.11□□□□□ -0.63
RNF4-222ENST00000541204 PTX4Q96A99 478 aa11.11□□□□□ -0.63
RNF4-222ENST00000541204 PHB2Q99623 299 aa11.11□□□□□ -0.63
RNF4-222ENST00000541204 ZNF416Q9BWM5 594 aa11.11□□□□□ -0.63
RNF4-222ENST00000541204 NKX6-2Q9C056 277 aaPredicted RBP11.11□□□□□ -0.63
RNF4-222ENST00000541204 SLC2A8Q9NY64 477 aa11.11□□□□□ -0.63
RNF4-222ENST00000541204 RAB22AQ9UL26 194 aa11.11□□□□□ -0.63
RNF4-222ENST00000541204 RPH3AQ9Y2J0 694 aaPredicted RBP11.11□□□□□ -0.63
RNF4-222ENST00000541204 OR2AT4A6NND4 320 aa11.1□□□□□ -0.63
RNF4-222ENST00000541204 SULT2B1O00204 365 aa11.1□□□□□ -0.63
RNF4-222ENST00000541204 AKR1C2P52895 323 aa11.1□□□□□ -0.63
RNF4-222ENST00000541204 AKR1C1Q04828 323 aa11.1□□□□□ -0.63
RNF4-222ENST00000541204 ZNF704Q6ZNC4 412 aaPredicted RBP11.1□□□□□ -0.63
RNF4-222ENST00000541204 MISPQ8IVT2 679 aa11.1□□□□□ -0.63
RNF4-222ENST00000541204 NKAIN3Q8N8D7 197 aa11.1□□□□□ -0.63
RNF4-222ENST00000541204 CLRN3Q8NCR9 226 aa11.1□□□□□ -0.63
RNF4-222ENST00000541204 OR1S2Q8NGQ3 325 aa11.1□□□□□ -0.63
RNF4-222ENST00000541204 THAP6Q8TBB0 222 aa11.1□□□□□ -0.63
RNF4-222ENST00000541204 NAT6Q93015 286 aa11.1□□□□□ -0.63
RNF4-222ENST00000541204 MBD2Q9UBB5 411 aa11.1□□□□□ -0.63
RNF4-222ENST00000541204 PCDHB10Q9UN67 800 aa11.1□□□□□ -0.63
RNF4-222ENST00000541204 SDK2Q58EX2 2172 aa11.1□□□□□ -0.63
RNF4-222ENST00000541204 IL2RAP01589 272 aa11.1□□□□□ -0.63
RNF4-222ENST00000541204 H2BFMP0C1H6 154 aa11.1□□□□□ -0.63
RNF4-222ENST00000541204 RAB6AP20340 208 aa11.1□□□□□ -0.63
RNF4-222ENST00000541204 BDKRB2P30411 391 aa11.1□□□□□ -0.63
RNF4-222ENST00000541204 BIDP55957 195 aa11.1□□□□□ -0.63
RNF4-222ENST00000541204 HSF1Q00613 529 aa11.1□□□□□ -0.63
RNF4-222ENST00000541204 TMEM244Q5VVB8 128 aa11.1□□□□□ -0.63
RNF4-222ENST00000541204 CARD17Q5XLA6 110 aa11.1□□□□□ -0.63
RNF4-222ENST00000541204 INO80EQ8NBZ0 244 aaPredicted RBP11.1□□□□□ -0.63
RNF4-222ENST00000541204 ST8SIA1Q92185 356 aa11.1□□□□□ -0.63
RNF4-222ENST00000541204 MARC2Q969Z3 335 aa11.1□□□□□ -0.63
RNF4-222ENST00000541204 DDIT4LQ96D03 193 aa11.1□□□□□ -0.63
RNF4-222ENST00000541204 PHYHIPLQ96FC7 376 aa11.1□□□□□ -0.63
RNF4-222ENST00000541204 RASL10BQ96S79 203 aa11.1□□□□□ -0.63
RNF4-222ENST00000541204 FAM117AQ9C073 453 aa11.1□□□□□ -0.63
RNF4-222ENST00000541204 PCDHB16Q9NRJ7 776 aa11.1□□□□□ -0.63
RNF4-222ENST00000541204 PTRH2Q9Y3E5 179 aaKnown RBP11.1□□□□□ -0.63
RNF4-222ENST00000541204 NCOR1O75376 2440 aa11.1□□□□□ -0.63
RNF4-222ENST00000541204 GPR179Q6PRD1 2367 aa11.09□□□□□ -0.63
RNF4-222ENST00000541204 C13orf42A0A1B0GVH6 325 aa11.09□□□□□ -0.63
RNF4-222ENST00000541204 PMP2P02689 132 aa11.09□□□□□ -0.63
RNF4-222ENST00000541204 APOBEC1P41238 236 aaKnown RBP11.09□□□□□ -0.63
RNF4-222ENST00000541204 MYBPHQ13203 477 aa11.09□□□□□ -0.63
RNF4-222ENST00000541204 PDSS1Q5T2R2 415 aa11.09□□□□□ -0.63
RNF4-222ENST00000541204 RAB12Q6IQ22 244 aa11.09□□□□□ -0.63
RNF4-222ENST00000541204 ASB10Q8WXI3 467 aa11.09□□□□□ -0.63
RNF4-222ENST00000541204 FOXRED1Q96CU9 486 aaPredicted RBP11.09□□□□□ -0.63
RNF4-222ENST00000541204 ADAT3Q96EY9 351 aaPredicted RBP11.09□□□□□ -0.63
RNF4-222ENST00000541204 OR5B2Q96R09 309 aa11.09□□□□□ -0.63
RNF4-222ENST00000541204 FN3KRPQ9HA64 309 aa11.09□□□□□ -0.63
RNF4-222ENST00000541204 ASF1BQ9NVP2 202 aa11.09□□□□□ -0.63
RNF4-222ENST00000541204 COL5A1P20908 1838 aaPredicted RBP11.09□□□□□ -0.63
RNF4-222ENST00000541204 VSIG8P0DPA2 414 aa11.09□□□□□ -0.63
RNF4-222ENST00000541204 HLA-GP17693 338 aa11.09□□□□□ -0.63
RNF4-222ENST00000541204 KLK2P20151 261 aa11.09□□□□□ -0.63
RNF4-222ENST00000541204 ZDHHC22Q8N966 263 aa11.09□□□□□ -0.63
RNF4-222ENST00000541204 MICU1Q9BPX6 476 aa11.09□□□□□ -0.63
RNF4-222ENST00000541204 SELENOIQ9C0D9 397 aa11.09□□□□□ -0.63
RNF4-222ENST00000541204 KCNK7Q9Y2U2 307 aa11.09□□□□□ -0.63
RNF4-222ENST00000541204 WIF1Q9Y5W5 379 aa11.09□□□□□ -0.63
RNF4-222ENST00000541204 C5orf51A6NDU8 294 aa11.08□□□□□ -0.64
RNF4-222ENST00000541204 MPTX1A8MV57 137 aa11.08□□□□□ -0.64
RNF4-222ENST00000541204 EFSO43281 561 aa11.08□□□□□ -0.64
RNF4-222ENST00000541204 TTRP02766 147 aa11.08□□□□□ -0.64
RNF4-222ENST00000541204 PGAM2P15259 253 aa11.08□□□□□ -0.64
RNF4-222ENST00000541204 PTGDSP41222 190 aa11.08□□□□□ -0.64
RNF4-222ENST00000541204 TCEAL6Q6IPX3 200 aa11.08□□□□□ -0.64
RNF4-222ENST00000541204 RNF144BQ7Z419 303 aa11.08□□□□□ -0.64
RNF4-222ENST00000541204 MFSD8Q8NHS3 518 aa11.08□□□□□ -0.64
RNF4-222ENST00000541204 TCEAL3Q969E4 200 aa11.08□□□□□ -0.64
RNF4-222ENST00000541204 JSRP1Q96MG2 331 aaPredicted RBP11.08□□□□□ -0.64
RNF4-222ENST00000541204 SPACA5Q96QH8 159 aa11.08□□□□□ -0.64
RNF4-222ENST00000541204 SLC6A15Q9H2J7 730 aa11.08□□□□□ -0.64
RNF4-222ENST00000541204 CHST11Q9NPF2 352 aa11.08□□□□□ -0.64
RNF4-222ENST00000541204 LIPT2A6NK58 231 aa11.08□□□□□ -0.64
RNF4-222ENST00000541204 GPR31O00270 319 aa11.08□□□□□ -0.64
RNF4-222ENST00000541204 ZNF208O43345 1280 aa11.08□□□□□ -0.64
RNF4-222ENST00000541204 QRFPP83859 136 aa11.08□□□□□ -0.64
RNF4-222ENST00000541204 PLPPR5Q32ZL2 321 aa11.08□□□□□ -0.64
RNF4-222ENST00000541204 WDR5BQ86VZ2 330 aa11.08□□□□□ -0.64
RNF4-222ENST00000541204 MAML2Q8IZL2 1156 aaPredicted RBP11.08□□□□□ -0.64
RNF4-222ENST00000541204 OR13C9Q8NGT0 318 aa11.08□□□□□ -0.64
RNF4-222ENST00000541204 POC1BQ8TC44 478 aa11.08□□□□□ -0.64
RNF4-222ENST00000541204 MARCH1Q8TCQ1 289 aa11.08□□□□□ -0.64
RNF4-222ENST00000541204 ZC3H10Q96K80 434 aaKnown RBP11.08□□□□□ -0.64
RNF4-222ENST00000541204 NECAB3Q96P71 396 aaPredicted RBP11.08□□□□□ -0.64
RNF4-222ENST00000541204 KCNK17Q96T54 332 aa11.08□□□□□ -0.64
RNF4-222ENST00000541204 NICN1Q9BSH3 213 aa11.08□□□□□ -0.64
RNF4-222ENST00000541204 PIGMQ9H3S5 423 aa11.08□□□□□ -0.64
RNF4-222ENST00000541204 FAM206AQ9NX38 181 aa11.08□□□□□ -0.64
RNF4-222ENST00000541204 SLC39A1Q9NY26 324 aa11.08□□□□□ -0.64
RNF4-222ENST00000541204 C19orf25Q9UFG5 118 aaPredicted RBP11.08□□□□□ -0.64
RNF4-222ENST00000541204 SLC5A6Q9Y289 635 aa11.08□□□□□ -0.64
RNF4-222ENST00000541204 SYT7O43581 403 aa11.07□□□□□ -0.64
RNF4-222ENST00000541204 SSX5O60225 188 aa11.07□□□□□ -0.64
RNF4-222ENST00000541204 ATG12O94817 140 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms