RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 RAE1P78406 368 aaKnown RBP13.53□□□□□ -0.24
SMARCA4-207ENST00000541122 RAB35Q15286 201 aa13.53□□□□□ -0.24
SMARCA4-207ENST00000541122 CDONQ4KMG0 1287 aa13.53□□□□□ -0.24
SMARCA4-207ENST00000541122 OR5B3Q8NH48 314 aa13.53□□□□□ -0.24
SMARCA4-207ENST00000541122 OR51F2Q8NH61 342 aa13.53□□□□□ -0.24
SMARCA4-207ENST00000541122 NAT6Q93015 286 aa13.53□□□□□ -0.24
SMARCA4-207ENST00000541122 REEP6Q96HR9 211 aa13.53□□□□□ -0.24
SMARCA4-207ENST00000541122 TMEM30AQ9NV96 361 aa13.53□□□□□ -0.24
SMARCA4-207ENST00000541122 ZNF230Q9UIE0 474 aaPredicted RBP13.53□□□□□ -0.24
SMARCA4-207ENST00000541122 SSUH2Q9Y2M2 353 aa13.53□□□□□ -0.24
SMARCA4-207ENST00000541122 TMED3Q9Y3Q3 217 aa13.53□□□□□ -0.24
SMARCA4-207ENST00000541122 ARPC3O15145 178 aa13.53□□□□□ -0.24
SMARCA4-207ENST00000541122 CTAG2O75638 210 aa13.53□□□□□ -0.24
SMARCA4-207ENST00000541122 CTRB1P17538 263 aa13.53□□□□□ -0.24
SMARCA4-207ENST00000541122 CARD18P57730 90 aa13.53□□□□□ -0.24
SMARCA4-207ENST00000541122 CTRB2Q6GPI1 263 aa13.53□□□□□ -0.24
SMARCA4-207ENST00000541122 TIPARPQ7Z3E1 657 aaKnown RBP13.53□□□□□ -0.24
SMARCA4-207ENST00000541122 FAM24BQ8N5W8 94 aa13.53□□□□□ -0.24
SMARCA4-207ENST00000541122 ADGRL4Q9HBW9 690 aa13.53□□□□□ -0.24
SMARCA4-207ENST00000541122 WNT11O96014 354 aa13.53□□□□□ -0.24
SMARCA4-207ENST00000541122 PPP1R1AQ13522 171 aa13.53□□□□□ -0.24
SMARCA4-207ENST00000541122 TMEM183BQ1AE95 376 aa13.53□□□□□ -0.24
SMARCA4-207ENST00000541122 ZNF66Q6ZN08 573 aa13.53□□□□□ -0.24
SMARCA4-207ENST00000541122 OR4S1Q8NGB4 309 aa13.53□□□□□ -0.24
SMARCA4-207ENST00000541122 ZNF275Q9NSD4 429 aaPredicted RBP13.53□□□□□ -0.24
SMARCA4-207ENST00000541122 CCL26Q9Y258 94 aa13.53□□□□□ -0.24
SMARCA4-207ENST00000541122 YTHDF2Q9Y5A9 579 aaKnown RBP13.53□□□□□ -0.24
SMARCA4-207ENST00000541122 XRCC2O43543 280 aa13.53□□□□□ -0.24
SMARCA4-207ENST00000541122 OR10J4P0C629 311 aa13.53□□□□□ -0.24
SMARCA4-207ENST00000541122 SYT13Q7L8C5 426 aa13.53□□□□□ -0.24
SMARCA4-207ENST00000541122 OR11L1Q8NGX0 322 aa13.53□□□□□ -0.24
SMARCA4-207ENST00000541122 ORAI1Q96D31 301 aa13.53□□□□□ -0.24
SMARCA4-207ENST00000541122 FAM103A1Q9BTL3 118 aaKnown RBP13.53□□□□□ -0.24
SMARCA4-207ENST00000541122 CREBZFQ9NS37 354 aa13.53□□□□□ -0.24
SMARCA4-207ENST00000541122 THBS4P35443 961 aa13.52□□□□□ -0.24
SMARCA4-207ENST00000541122 PNRC1Q12796 327 aaPredicted RBP13.52□□□□□ -0.24
SMARCA4-207ENST00000541122 PLA1AQ53H76 456 aa13.52□□□□□ -0.24
SMARCA4-207ENST00000541122 NHLRC1Q6VVB1 395 aa13.52□□□□□ -0.24
SMARCA4-207ENST00000541122 CA13Q8N1Q1 262 aa13.52□□□□□ -0.24
SMARCA4-207ENST00000541122 OR4C5Q8NGB2 326 aa13.52□□□□□ -0.24
SMARCA4-207ENST00000541122 CCDC74AQ96AQ1 378 aa13.52□□□□□ -0.24
SMARCA4-207ENST00000541122 FAM210BQ96KR6 192 aa13.52□□□□□ -0.24
SMARCA4-207ENST00000541122 LGALSLQ3ZCW2 172 aaPredicted RBP13.52□□□□□ -0.24
SMARCA4-207ENST00000541122 KIRREL2Q6UWL6 708 aa13.52□□□□□ -0.24
SMARCA4-207ENST00000541122 CTDSP1Q9GZU7 261 aa13.52□□□□□ -0.24
SMARCA4-207ENST00000541122 MRPL22Q9NWU5 206 aaKnown RBP13.52□□□□□ -0.24
SMARCA4-207ENST00000541122 WSB2Q9NYS7 404 aaPredicted RBP13.52□□□□□ -0.24
SMARCA4-207ENST00000541122 HS3ST3A1Q9Y663 406 aa13.52□□□□□ -0.24
SMARCA4-207ENST00000541122 M0R135 149 aa13.52□□□□□ -0.25
SMARCA4-207ENST00000541122 PGA3P0DJD8 388 aa13.52□□□□□ -0.25
SMARCA4-207ENST00000541122 UBE2G2P60604 165 aa13.52□□□□□ -0.25
SMARCA4-207ENST00000541122 DCDP81605 110 aaKnown RBP13.52□□□□□ -0.25
SMARCA4-207ENST00000541122 INPP5JQ15735 1006 aaPredicted RBP13.52□□□□□ -0.25
SMARCA4-207ENST00000541122 PRAMEF5Q5TYX0 476 aa13.52□□□□□ -0.25
SMARCA4-207ENST00000541122 PRAMEF6Q5VXH4 476 aa13.52□□□□□ -0.25
SMARCA4-207ENST00000541122 OVCH2Q7RTZ1 564 aa13.52□□□□□ -0.25
SMARCA4-207ENST00000541122 NT5CQ8TCD5 201 aa13.52□□□□□ -0.25
SMARCA4-207ENST00000541122 CMBLQ96DG6 245 aa13.52□□□□□ -0.25
SMARCA4-207ENST00000541122 ZNF799Q96GE5 643 aa13.52□□□□□ -0.25
SMARCA4-207ENST00000541122 TMPRSS13Q9BYE2 586 aa13.52□□□□□ -0.25
SMARCA4-207ENST00000541122 LMAN1LQ9HAT1 526 aa13.52□□□□□ -0.25
SMARCA4-207ENST00000541122 RNF186Q9NXI6 227 aa13.52□□□□□ -0.25
SMARCA4-207ENST00000541122 ZNF107Q9UII5 783 aaPredicted RBP13.52□□□□□ -0.25
SMARCA4-207ENST00000541122 A0A087WUJ7 227 aa13.52□□□□□ -0.25
SMARCA4-207ENST00000541122 A0A0B4J2E0 115 aa13.52□□□□□ -0.25
SMARCA4-207ENST00000541122 A0A1B0GX12 115 aa13.52□□□□□ -0.25
SMARCA4-207ENST00000541122 C7orf66A4D0T2 115 aa13.52□□□□□ -0.25
SMARCA4-207ENST00000541122 MRPL58Q14197 206 aaKnown RBP13.52□□□□□ -0.25
SMARCA4-207ENST00000541122 FXNQ16595 210 aa13.52□□□□□ -0.25
SMARCA4-207ENST00000541122 RTL8AQ9BWD3 113 aa13.52□□□□□ -0.25
SMARCA4-207ENST00000541122 OBP2AQ9NY56 170 aa13.52□□□□□ -0.25
SMARCA4-207ENST00000541122 ZNF816-ZNF321PA0A0X1KG74 233 aa13.51□□□□□ -0.25
SMARCA4-207ENST00000541122 A6NCN8 305 aa13.51□□□□□ -0.25
SMARCA4-207ENST00000541122 K7ESM1 405 aa13.51□□□□□ -0.25
SMARCA4-207ENST00000541122 M0QZK8 103 aa13.51□□□□□ -0.25
SMARCA4-207ENST00000541122 M0R143 59 aa13.51□□□□□ -0.25
SMARCA4-207ENST00000541122 GGCTO75223 188 aaKnown RBP13.51□□□□□ -0.25
SMARCA4-207ENST00000541122 QDPRP09417 244 aa13.51□□□□□ -0.25
SMARCA4-207ENST00000541122 EN2P19622 333 aaPredicted RBP13.51□□□□□ -0.25
SMARCA4-207ENST00000541122 LAIR1Q6GTX8 287 aa13.51□□□□□ -0.25
SMARCA4-207ENST00000541122 ZNF321PQ8N8H1 164 aa13.51□□□□□ -0.25
SMARCA4-207ENST00000541122 PP6455Q8WZ26 134 aa13.51□□□□□ -0.25
SMARCA4-207ENST00000541122 WDR34Q96EX3 536 aa13.51□□□□□ -0.25
SMARCA4-207ENST00000541122 TECTBQ96PL2 329 aa13.51□□□□□ -0.25
SMARCA4-207ENST00000541122 NPAS1Q99742 590 aa13.51□□□□□ -0.25
SMARCA4-207ENST00000541122 TMEM272A0A1B0GTI8 110 aa13.51□□□□□ -0.25
SMARCA4-207ENST00000541122 ZNF732B4DXR9 585 aa13.51□□□□□ -0.25
SMARCA4-207ENST00000541122 SCRG1O75711 98 aa13.51□□□□□ -0.25
SMARCA4-207ENST00000541122 IL13RA2Q14627 380 aa13.51□□□□□ -0.25
SMARCA4-207ENST00000541122 FAM78AQ5JUQ0 283 aa13.51□□□□□ -0.25
SMARCA4-207ENST00000541122 ASTLQ6HA08 431 aaPredicted RBP13.51□□□□□ -0.25
SMARCA4-207ENST00000541122 TOMM20LQ6UXN7 152 aa13.51□□□□□ -0.25
SMARCA4-207ENST00000541122 OR11H7Q8NGC8 314 aa13.51□□□□□ -0.25
SMARCA4-207ENST00000541122 MARVELD3Q96A59 401 aa13.51□□□□□ -0.25
SMARCA4-207ENST00000541122 HIF1ANQ9NWT6 349 aa13.51□□□□□ -0.25
SMARCA4-207ENST00000541122 POLDIP2Q9Y2S7 368 aa13.51□□□□□ -0.25
SMARCA4-207ENST00000541122 MMP24Q9Y5R2 645 aa13.51□□□□□ -0.25
SMARCA4-207ENST00000541122 TRAPPC1Q9Y5R8 145 aa13.51□□□□□ -0.25
SMARCA4-207ENST00000541122 CD1CP29017 333 aa13.51□□□□□ -0.25
SMARCA4-207ENST00000541122 CCKARP32238 428 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms