RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 ABHD12BQ7Z5M8 362 aaPredicted RBP3.51□□□□□ -1.85
YBX3-210ENST00000540975 SNX20Q7Z614 316 aa3.51□□□□□ -1.85
YBX3-210ENST00000540975 LINC01551Q86U37 167 aa3.51□□□□□ -1.85
YBX3-210ENST00000540975 CENPLQ8N0S6 344 aaPredicted RBP3.51□□□□□ -1.85
YBX3-210ENST00000540975 RIBC1Q8N443 379 aaPredicted RBP3.51□□□□□ -1.85
YBX3-210ENST00000540975 C17orf78Q8N4C9 275 aa3.51□□□□□ -1.85
YBX3-210ENST00000540975 TMEM35BQ8NCS4 154 aa3.51□□□□□ -1.85
YBX3-210ENST00000540975 OR10A7Q8NGE5 316 aa3.51□□□□□ -1.85
YBX3-210ENST00000540975 OR2D3Q8NGH3 330 aa3.51□□□□□ -1.85
YBX3-210ENST00000540975 ACTRT1Q8TDG2 376 aa3.51□□□□□ -1.85
YBX3-210ENST00000540975 FAM172AQ8WUF8 416 aa3.51□□□□□ -1.85
YBX3-210ENST00000540975 TCTEX1D2Q8WW35 142 aa3.51□□□□□ -1.85
YBX3-210ENST00000540975 RPL3LQ92901 407 aaKnown RBP3.51□□□□□ -1.85
YBX3-210ENST00000540975 DGCR14Q96DF8 476 aaKnown RBP3.51□□□□□ -1.85
YBX3-210ENST00000540975 TCEAL4Q96EI5 215 aa3.51□□□□□ -1.85
YBX3-210ENST00000540975 RILPQ96NA2 401 aa3.51□□□□□ -1.85
YBX3-210ENST00000540975 PRRT1Q99946 306 aa3.51□□□□□ -1.85
YBX3-210ENST00000540975 ZNF251Q9BRH9 671 aa3.51□□□□□ -1.85
YBX3-210ENST00000540975 SCRT1Q9BWW7 348 aa3.51□□□□□ -1.85
YBX3-210ENST00000540975 SLC19A3Q9BZV2 496 aa3.51□□□□□ -1.85
YBX3-210ENST00000540975 ROGDIQ9GZN7 287 aa3.51□□□□□ -1.85
YBX3-210ENST00000540975 WDR55Q9H6Y2 383 aaPredicted RBP3.51□□□□□ -1.85
YBX3-210ENST00000540975 ANKRA2Q9H9E1 313 aa3.51□□□□□ -1.85
YBX3-210ENST00000540975 IMP3Q9NV31 184 aaKnown RBP3.51□□□□□ -1.85
YBX3-210ENST00000540975 COA4Q9NYJ1 87 aa3.51□□□□□ -1.85
YBX3-210ENST00000540975 TAS2R1Q9NYW7 299 aa3.51□□□□□ -1.85
YBX3-210ENST00000540975 MTCH1Q9NZJ7 389 aa3.51□□□□□ -1.85
YBX3-210ENST00000540975 ASF1AQ9Y294 204 aa3.51□□□□□ -1.85
YBX3-210ENST00000540975 ARL2BPQ9Y2Y0 163 aa3.51□□□□□ -1.85
YBX3-210ENST00000540975 NDUFAF1Q9Y375 327 aa3.51□□□□□ -1.85
YBX3-210ENST00000540975 PXDNLA1KZ92 1463 aa3.51□□□□□ -1.85
YBX3-210ENST00000540975 A2ML1A8K2U0 1454 aa3.51□□□□□ -1.85
YBX3-210ENST00000540975 SCN2AQ99250 2005 aa3.51□□□□□ -1.85
YBX3-210ENST00000540975 NID2Q14112 1375 aa3.51□□□□□ -1.85
YBX3-210ENST00000540975 FRMPD3Q5JV73 1810 aa3.5□□□□□ -1.85
YBX3-210ENST00000540975 IGLV4-69A0A075B6H9 119 aa3.5□□□□□ -1.85
YBX3-210ENST00000540975 SPRR5A0A1B0GTR4 108 aa3.5□□□□□ -1.85
YBX3-210ENST00000540975 A0A1B0GV90 55 aa3.5□□□□□ -1.85
YBX3-210ENST00000540975 A0A1B0GW15 77 aa3.5□□□□□ -1.85
YBX3-210ENST00000540975 SLC5A10A0PJK1 596 aa3.5□□□□□ -1.85
YBX3-210ENST00000540975 FABP12A6NFH5 140 aa3.5□□□□□ -1.85
YBX3-210ENST00000540975 RFPL4AA6NLU0 287 aa3.5□□□□□ -1.85
YBX3-210ENST00000540975 NPIPA7E9PJI5 369 aa3.5□□□□□ -1.85
YBX3-210ENST00000540975 RFPL4AL1F8VTS6 287 aa3.5□□□□□ -1.85
YBX3-210ENST00000540975 SMLR1H3BR10 107 aa3.5□□□□□ -1.85
YBX3-210ENST00000540975 BCKDKO14874 412 aa3.5□□□□□ -1.85
YBX3-210ENST00000540975 ACOX3O15254 700 aa3.5□□□□□ -1.85
YBX3-210ENST00000540975 AQP9O43315 295 aa3.5□□□□□ -1.85
YBX3-210ENST00000540975 OR10H3O60404 316 aa3.5□□□□□ -1.85
YBX3-210ENST00000540975 LYPLA2O95372 231 aa3.5□□□□□ -1.85
YBX3-210ENST00000540975 NPIPA8P0DM63 369 aa3.5□□□□□ -1.85
YBX3-210ENST00000540975 ADRB3P13945 408 aa3.5□□□□□ -1.85
YBX3-210ENST00000540975 ZNF44P15621 663 aa3.5□□□□□ -1.85
YBX3-210ENST00000540975 TPSB2P20231 275 aa3.5□□□□□ -1.85
YBX3-210ENST00000540975 SHMT2P34897 504 aa3.5□□□□□ -1.85
YBX3-210ENST00000540975 MAS1LP35410 378 aa3.5□□□□□ -1.85
YBX3-210ENST00000540975 P2RY2P41231 377 aa3.5□□□□□ -1.85
YBX3-210ENST00000540975 RAB13P51153 203 aa3.5□□□□□ -1.85
YBX3-210ENST00000540975 CCR6P51684 374 aa3.5□□□□□ -1.85
YBX3-210ENST00000540975 BIDP55957 195 aa3.5□□□□□ -1.85
YBX3-210ENST00000540975 KRTAP10-10P60014 251 aa3.5□□□□□ -1.85
YBX3-210ENST00000540975 ERVS71-1P61550 626 aa3.5□□□□□ -1.85
YBX3-210ENST00000540975 ARL6IP1Q15041 203 aa3.5□□□□□ -1.85
YBX3-210ENST00000540975 TPSAB1Q15661 275 aa3.5□□□□□ -1.85
YBX3-210ENST00000540975 C18orf21Q32NC0 220 aaPredicted RBP3.5□□□□□ -1.85
YBX3-210ENST00000540975 NDUFAF6Q330K2 333 aa3.5□□□□□ -1.85
YBX3-210ENST00000540975 TMEM41BQ5BJD5 291 aa3.5□□□□□ -1.85
YBX3-210ENST00000540975 KLF17Q5JT82 389 aaPredicted RBP3.5□□□□□ -1.85
YBX3-210ENST00000540975 HACD4Q5VWC8 232 aa3.5□□□□□ -1.85
YBX3-210ENST00000540975 ADNP2Q6IQ32 1131 aa3.5□□□□□ -1.85
YBX3-210ENST00000540975 ANKRD26P1Q6NSI1 321 aa3.5□□□□□ -1.85
YBX3-210ENST00000540975 TMEM220Q6QAJ8 160 aa3.5□□□□□ -1.85
YBX3-210ENST00000540975 CBLN3Q6UW01 205 aa3.5□□□□□ -1.85
YBX3-210ENST00000540975 CLEC18BQ6UXF7 455 aa3.5□□□□□ -1.85
YBX3-210ENST00000540975 CERS6Q6ZMG9 384 aa3.5□□□□□ -1.85
YBX3-210ENST00000540975 ZFP2Q6ZN57 461 aa3.5□□□□□ -1.85
YBX3-210ENST00000540975 RFLNAQ6ZTI6 216 aa3.5□□□□□ -1.85
YBX3-210ENST00000540975 SSX9Q7RTT3 188 aa3.5□□□□□ -1.85
YBX3-210ENST00000540975 DHFR2Q86XF0 187 aa3.5□□□□□ -1.85
YBX3-210ENST00000540975 FAM71AQ8IYT1 594 aa3.5□□□□□ -1.85
YBX3-210ENST00000540975 MICU2Q8IYU8 434 aa3.5□□□□□ -1.85
YBX3-210ENST00000540975 SAXO1Q8IYX7 474 aa3.5□□□□□ -1.85
YBX3-210ENST00000540975 STK40Q8N2I9 435 aa3.5□□□□□ -1.85
YBX3-210ENST00000540975 KIF2BQ8N4N8 673 aa3.5□□□□□ -1.85
YBX3-210ENST00000540975 KIR3DL3Q8N743 410 aa3.5□□□□□ -1.85
YBX3-210ENST00000540975 SYT14Q8NB59 555 aa3.5□□□□□ -1.85
YBX3-210ENST00000540975 ACBD4Q8NC06 268 aa3.5□□□□□ -1.85
YBX3-210ENST00000540975 FBXL13Q8NEE6 735 aa3.5□□□□□ -1.85
YBX3-210ENST00000540975 FAM83FQ8NEG4 500 aaPredicted RBP3.5□□□□□ -1.85
YBX3-210ENST00000540975 STXBP6Q8NFX7 210 aa3.5□□□□□ -1.85
YBX3-210ENST00000540975 OR13C9Q8NGT0 318 aa3.5□□□□□ -1.85
YBX3-210ENST00000540975 OR56B4Q8NH76 319 aa3.5□□□□□ -1.85
YBX3-210ENST00000540975 OR6X1Q8NH79 312 aa3.5□□□□□ -1.85
YBX3-210ENST00000540975 NEK7Q8TDX7 302 aa3.5□□□□□ -1.85
YBX3-210ENST00000540975 CA5BP1Q8WTZ4 195 aa3.5□□□□□ -1.85
YBX3-210ENST00000540975 PYROXD1Q8WU10 500 aa3.5□□□□□ -1.85
YBX3-210ENST00000540975 AP3S1Q92572 193 aa3.5□□□□□ -1.85
YBX3-210ENST00000540975 EXOSC8Q96B26 276 aaKnown RBP3.5□□□□□ -1.85
YBX3-210ENST00000540975 MRPL48Q96GC5 212 aaKnown RBP3.5□□□□□ -1.85
YBX3-210ENST00000540975 FAM210BQ96KR6 192 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms