RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 CHRNA10Q9GZZ6 450 aa8.96□□□□□ -0.97
TRAF1-202ENST00000540010 KCNK15Q9H427 330 aa8.96□□□□□ -0.97
TRAF1-202ENST00000540010 ENY2Q9NPA8 101 aa8.96□□□□□ -0.97
TRAF1-202ENST00000540010 FLRT3Q9NZU0 649 aa8.96□□□□□ -0.97
TRAF1-202ENST00000540010 WIF1Q9Y5W5 379 aa8.96□□□□□ -0.97
TRAF1-202ENST00000540010 NCOR1O75376 2440 aa8.96□□□□□ -0.98
TRAF1-202ENST00000540010 LEUTXA8MZ59 168 aa8.96□□□□□ -0.98
TRAF1-202ENST00000540010 CHRM2P08172 466 aa8.96□□□□□ -0.98
TRAF1-202ENST00000540010 ZNF728P0DKX0 622 aa8.96□□□□□ -0.98
TRAF1-202ENST00000540010 NDUFA6P56556 154 aa8.96□□□□□ -0.98
TRAF1-202ENST00000540010 STT3BQ8TCJ2 826 aa8.96□□□□□ -0.98
TRAF1-202ENST00000540010 CMBLQ96DG6 245 aa8.96□□□□□ -0.98
TRAF1-202ENST00000540010 OCSTAMPQ9BR26 566 aa8.96□□□□□ -0.98
TRAF1-202ENST00000540010 VN1R1Q9GZP7 353 aa8.96□□□□□ -0.98
TRAF1-202ENST00000540010 ZNF286AQ9HBT8 521 aa8.96□□□□□ -0.98
TRAF1-202ENST00000540010 PRSS37A4D1T9 235 aa8.96□□□□□ -0.98
TRAF1-202ENST00000540010 ZNF705FA8MVS1 300 aaPredicted RBP8.96□□□□□ -0.98
TRAF1-202ENST00000540010 MSTNO14793 375 aa8.96□□□□□ -0.98
TRAF1-202ENST00000540010 NDUFB6O95139 128 aa8.96□□□□□ -0.98
TRAF1-202ENST00000540010 ZNF705DP0CH99 300 aaPredicted RBP8.96□□□□□ -0.98
TRAF1-202ENST00000540010 ZNF705BP0CI00 300 aaPredicted RBP8.96□□□□□ -0.98
TRAF1-202ENST00000540010 ATP1B3P54709 279 aa8.96□□□□□ -0.98
TRAF1-202ENST00000540010 FOXL2P58012 376 aa8.96□□□□□ -0.98
TRAF1-202ENST00000540010 ZNF141Q15928 474 aa8.96□□□□□ -0.98
TRAF1-202ENST00000540010 TAF9Q16594 264 aa8.96□□□□□ -0.98
TRAF1-202ENST00000540010 LPCAT3Q6P1A2 487 aa8.96□□□□□ -0.98
TRAF1-202ENST00000540010 CBLN3Q6UW01 205 aa8.96□□□□□ -0.98
TRAF1-202ENST00000540010 SLC16A14Q7RTX9 510 aa8.96□□□□□ -0.98
TRAF1-202ENST00000540010 SLC43A2Q8N370 569 aa8.96□□□□□ -0.98
TRAF1-202ENST00000540010 C12orf57Q99622 126 aa8.96□□□□□ -0.98
TRAF1-202ENST00000540010 NUDT9Q9BW91 350 aa8.96□□□□□ -0.98
TRAF1-202ENST00000540010 GPR84Q9NQS5 396 aa8.96□□□□□ -0.98
TRAF1-202ENST00000540010 CHRNA9Q9UGM1 479 aa8.96□□□□□ -0.98
TRAF1-202ENST00000540010 A0A087WUJ7 227 aa8.95□□□□□ -0.98
TRAF1-202ENST00000540010 MGMTP16455 207 aa8.95□□□□□ -0.98
TRAF1-202ENST00000540010 CDKN2AP42771 156 aaKnown RBP8.95□□□□□ -0.98
TRAF1-202ENST00000540010 SLC37A1P57057 533 aa8.95□□□□□ -0.98
TRAF1-202ENST00000540010 HSF1Q00613 529 aa8.95□□□□□ -0.98
TRAF1-202ENST00000540010 LGALSLQ3ZCW2 172 aaPredicted RBP8.95□□□□□ -0.98
TRAF1-202ENST00000540010 NKAIN1Q4KMZ8 207 aa8.95□□□□□ -0.98
TRAF1-202ENST00000540010 ACTBL2Q562R1 376 aa8.95□□□□□ -0.98
TRAF1-202ENST00000540010 LANCL3Q6ZV70 420 aa8.95□□□□□ -0.98
TRAF1-202ENST00000540010 C9orf62Q8N4C0 152 aa8.95□□□□□ -0.98
TRAF1-202ENST00000540010 BHLHE23Q8NDY6 225 aa8.95□□□□□ -0.98
TRAF1-202ENST00000540010 PLPP5Q8NEB5 264 aa8.95□□□□□ -0.98
TRAF1-202ENST00000540010 OR1M1Q8NGA1 313 aa8.95□□□□□ -0.98
TRAF1-202ENST00000540010 ZNF501Q96CX3 271 aaPredicted RBP8.95□□□□□ -0.98
TRAF1-202ENST00000540010 B9D1Q9UPM9 204 aa8.95□□□□□ -0.98
TRAF1-202ENST00000540010 PATE3B3GLJ2 98 aa8.95□□□□□ -0.98
TRAF1-202ENST00000540010 MT-ATP6P00846 226 aa8.95□□□□□ -0.98
TRAF1-202ENST00000540010 MFGE8Q08431 387 aaPredicted RBP8.95□□□□□ -0.98
TRAF1-202ENST00000540010 CNN3Q15417 329 aaKnown RBP8.95□□□□□ -0.98
TRAF1-202ENST00000540010 Q6ZRG5 221 aa8.95□□□□□ -0.98
TRAF1-202ENST00000540010 PPP1R3BQ86XI6 285 aa8.95□□□□□ -0.98
TRAF1-202ENST00000540010 ATOH1Q92858 354 aaPredicted RBP8.95□□□□□ -0.98
TRAF1-202ENST00000540010 MS4A7Q9GZW8 240 aaPredicted RBP8.95□□□□□ -0.98
TRAF1-202ENST00000540010 ENKD1Q9H0I2 346 aa8.95□□□□□ -0.98
TRAF1-202ENST00000540010 SCPEP1Q9HB40 452 aa8.95□□□□□ -0.98
TRAF1-202ENST00000540010 SPACA1Q9HBV2 294 aa8.95□□□□□ -0.98
TRAF1-202ENST00000540010 SIRT4Q9Y6E7 314 aaPredicted RBP8.95□□□□□ -0.98
TRAF1-202ENST00000540010 TTLL8A6PVC2 850 aa8.95□□□□□ -0.98
TRAF1-202ENST00000540010 EDN3P14138 238 aa8.95□□□□□ -0.98
TRAF1-202ENST00000540010 RPL23AP62750 156 aaKnown RBP8.95□□□□□ -0.98
TRAF1-202ENST00000540010 ZXDAP98168 799 aa8.95□□□□□ -0.98
TRAF1-202ENST00000540010 SMUG1Q53HV7 270 aa8.95□□□□□ -0.98
TRAF1-202ENST00000540010 WDR38Q5JTN6 314 aa8.95□□□□□ -0.98
TRAF1-202ENST00000540010 SHEQ5VZ18 495 aa8.95□□□□□ -0.98
TRAF1-202ENST00000540010 SFT2D1Q8WV19 159 aa8.95□□□□□ -0.98
TRAF1-202ENST00000540010 CCDC74BQ96LY2 380 aa8.95□□□□□ -0.98
TRAF1-202ENST00000540010 SLC25A32Q9H2D1 315 aa8.95□□□□□ -0.98
TRAF1-202ENST00000540010 PPP1R3EQ9H7J1 279 aa8.95□□□□□ -0.98
TRAF1-202ENST00000540010 KCNIP1Q9NZI2 227 aa8.95□□□□□ -0.98
TRAF1-202ENST00000540010 PILRBQ9UKJ0 227 aa8.95□□□□□ -0.98
TRAF1-202ENST00000540010 B3GALT5Q9Y2C3 310 aa8.95□□□□□ -0.98
TRAF1-202ENST00000540010 EXOGQ9Y2C4 368 aaKnown RBP8.95□□□□□ -0.98
TRAF1-202ENST00000540010 EP300Q09472 2414 aaPredicted RBP8.94□□□□□ -0.98
TRAF1-202ENST00000540010 TRIM77I1YAP6 450 aa8.94□□□□□ -0.98
TRAF1-202ENST00000540010 DCTN6O00399 190 aa8.94□□□□□ -0.98
TRAF1-202ENST00000540010 SLC17A2O00624 439 aa8.94□□□□□ -0.98
TRAF1-202ENST00000540010 GLSO94925 669 aaPredicted RBP8.94□□□□□ -0.98
TRAF1-202ENST00000540010 DPP4P27487 766 aa8.94□□□□□ -0.98
TRAF1-202ENST00000540010 ACAA2P42765 397 aaKnown RBP8.94□□□□□ -0.98
TRAF1-202ENST00000540010 DUSP3P51452 185 aaPredicted RBP8.94□□□□□ -0.98
TRAF1-202ENST00000540010 MRPL49Q13405 166 aaKnown RBP8.94□□□□□ -0.98
TRAF1-202ENST00000540010 TESK1Q15569 626 aa8.94□□□□□ -0.98
TRAF1-202ENST00000540010 WDR5BQ86VZ2 330 aa8.94□□□□□ -0.98
TRAF1-202ENST00000540010 C1orf210Q8IVY1 113 aa8.94□□□□□ -0.98
TRAF1-202ENST00000540010 CLEC1AQ8NC01 280 aa8.94□□□□□ -0.98
TRAF1-202ENST00000540010 IFI44Q8TCB0 444 aa8.94□□□□□ -0.98
TRAF1-202ENST00000540010 RNF128Q8TEB7 428 aa8.94□□□□□ -0.98
TRAF1-202ENST00000540010 C8orf44Q96CB5 159 aa8.94□□□□□ -0.98
TRAF1-202ENST00000540010 CXorf58Q96LI9 332 aa8.94□□□□□ -0.98
TRAF1-202ENST00000540010 LINC00052Q96N35 136 aa8.94□□□□□ -0.98
TRAF1-202ENST00000540010 KIF25Q9UIL4 384 aa8.94□□□□□ -0.98
TRAF1-202ENST00000540010 PIGLQ9Y2B2 252 aa8.94□□□□□ -0.98
TRAF1-202ENST00000540010 FRG2CA6NGY1 282 aa8.94□□□□□ -0.98
TRAF1-202ENST00000540010 OR6C76A6NM76 312 aa8.94□□□□□ -0.98
TRAF1-202ENST00000540010 MCRIP1C9JLW8 97 aa8.94□□□□□ -0.98
TRAF1-202ENST00000540010 XRCC2O43543 280 aa8.94□□□□□ -0.98
TRAF1-202ENST00000540010 CER1O95813 267 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms