RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 ZC3HAV1LQ96H79 300 aaKnown RBP19.59■□□□□ 0.73
HOMER3-204ENST00000539827 TAAR6Q96RI8 345 aa19.59■□□□□ 0.73
HOMER3-204ENST00000539827 SCNM1Q9BWG6 230 aa19.59■□□□□ 0.73
HOMER3-204ENST00000539827 URB1O60287 2271 aaKnown RBP19.59■□□□□ 0.73
HOMER3-204ENST00000539827 ORC5O43913 435 aa19.59■□□□□ 0.73
HOMER3-204ENST00000539827 PDGFAP04085 211 aa19.59■□□□□ 0.73
HOMER3-204ENST00000539827 MNDAP41218 407 aa19.59■□□□□ 0.73
HOMER3-204ENST00000539827 ADGRE4PQ86SQ3 457 aa19.59■□□□□ 0.73
HOMER3-204ENST00000539827 OR5M9Q8NGP3 310 aa19.59■□□□□ 0.73
HOMER3-204ENST00000539827 TRIB1Q96RU8 372 aa19.59■□□□□ 0.73
HOMER3-204ENST00000539827 METTL17Q9H7H0 456 aaPredicted RBP19.59■□□□□ 0.73
HOMER3-204ENST00000539827 DIABLOQ9NR28 239 aa19.59■□□□□ 0.73
HOMER3-204ENST00000539827 GABARAPH6UMI1 98 aa19.58■□□□□ 0.73
HOMER3-204ENST00000539827 AQP7O14520 342 aa19.58■□□□□ 0.73
HOMER3-204ENST00000539827 LDLRAD4O15165 306 aa19.58■□□□□ 0.73
HOMER3-204ENST00000539827 DHRS3O75911 302 aa19.58■□□□□ 0.73
HOMER3-204ENST00000539827 EIF2B2P49770 351 aaKnown RBP19.58■□□□□ 0.73
HOMER3-204ENST00000539827 RSBN1Q5VWQ0 802 aaPredicted RBP19.58■□□□□ 0.73
HOMER3-204ENST00000539827 PLET1Q6UQ28 207 aa19.58■□□□□ 0.73
HOMER3-204ENST00000539827 CPEB3Q8NE35 698 aaKnown RBP19.58■□□□□ 0.73
HOMER3-204ENST00000539827 DUSP18Q8NEJ0 188 aa19.58■□□□□ 0.73
HOMER3-204ENST00000539827 OR52H1Q8NGJ2 320 aa19.58■□□□□ 0.73
HOMER3-204ENST00000539827 CHAC2Q8WUX2 184 aa19.58■□□□□ 0.73
HOMER3-204ENST00000539827 ARHGAP21Q5T5U3 1957 aa19.58■□□□□ 0.72
HOMER3-204ENST00000539827 TRAV18A0A075B6X5 111 aa19.57■□□□□ 0.72
HOMER3-204ENST00000539827 CIB4A0PJX0 185 aa19.57■□□□□ 0.72
HOMER3-204ENST00000539827 GGT3PA6NGU5 568 aa19.57■□□□□ 0.72
HOMER3-204ENST00000539827 HLA-HP01893 362 aa19.57■□□□□ 0.72
HOMER3-204ENST00000539827 ERCC1P07992 297 aaPredicted RBP19.57■□□□□ 0.72
HOMER3-204ENST00000539827 FAHP16930 419 aa19.57■□□□□ 0.72
HOMER3-204ENST00000539827 ZNF93P35789 620 aaPredicted RBP19.57■□□□□ 0.72
HOMER3-204ENST00000539827 CBX3Q13185 183 aa19.57■□□□□ 0.72
HOMER3-204ENST00000539827 FCAMRQ8WWV6 532 aa19.57■□□□□ 0.72
HOMER3-204ENST00000539827 CLCF1Q9UBD9 225 aa19.57■□□□□ 0.72
HOMER3-204ENST00000539827 PIGLQ9Y2B2 252 aa19.57■□□□□ 0.72
HOMER3-204ENST00000539827 IGKV1-9A0A0C4DH69 117 aa19.57■□□□□ 0.72
HOMER3-204ENST00000539827 MEIOCA2RUB1 952 aa19.57■□□□□ 0.72
HOMER3-204ENST00000539827 K7EM74 188 aa19.57■□□□□ 0.72
HOMER3-204ENST00000539827 HCKP08631 526 aa19.57■□□□□ 0.72
HOMER3-204ENST00000539827 FCGR2AP12318 317 aa19.57■□□□□ 0.72
HOMER3-204ENST00000539827 THBS4P35443 961 aa19.57■□□□□ 0.72
HOMER3-204ENST00000539827 IGFL3Q6UXB1 125 aa19.57■□□□□ 0.72
HOMER3-204ENST00000539827 HPS1Q92902 700 aa19.57■□□□□ 0.72
HOMER3-204ENST00000539827 PHF21AQ96BD5 680 aa19.57■□□□□ 0.72
HOMER3-204ENST00000539827 REEP6Q96HR9 211 aa19.57■□□□□ 0.72
HOMER3-204ENST00000539827 KLK11Q9UBX7 282 aa19.57■□□□□ 0.72
HOMER3-204ENST00000539827 ZNF503-AS2A6NEH8 195 aa19.56■□□□□ 0.72
HOMER3-204ENST00000539827 BTCP35070 178 aa19.56■□□□□ 0.72
HOMER3-204ENST00000539827 PRSS12P56730 875 aa19.56■□□□□ 0.72
HOMER3-204ENST00000539827 KLF9Q13886 244 aaPredicted RBP19.56■□□□□ 0.72
HOMER3-204ENST00000539827 NPRL2Q8WTW4 380 aa19.56■□□□□ 0.72
HOMER3-204ENST00000539827 UQCC2Q9BRT2 126 aa19.56■□□□□ 0.72
HOMER3-204ENST00000539827 CD79AP11912 226 aa19.55■□□□□ 0.72
HOMER3-204ENST00000539827 GABRA1P14867 456 aa19.55■□□□□ 0.72
HOMER3-204ENST00000539827 Q6ZSR3 168 aa19.55■□□□□ 0.72
HOMER3-204ENST00000539827 ZNF627Q7L945 461 aa19.55■□□□□ 0.72
HOMER3-204ENST00000539827 AKAP14Q86UN6 197 aa19.55■□□□□ 0.72
HOMER3-204ENST00000539827 ANGPTL5Q86XS5 388 aa19.55■□□□□ 0.72
HOMER3-204ENST00000539827 GMPPAQ96IJ6 420 aaPredicted RBP19.55■□□□□ 0.72
HOMER3-204ENST00000539827 NOX3Q9HBY0 568 aa19.55■□□□□ 0.72
HOMER3-204ENST00000539827 B3GNT2Q9NY97 397 aa19.55■□□□□ 0.72
HOMER3-204ENST00000539827 AKAP13Q12802 2813 aa19.55■□□□□ 0.72
HOMER3-204ENST00000539827 MTRF1O75570 445 aaKnown RBP19.55■□□□□ 0.72
HOMER3-204ENST00000539827 MT-ND4P03905 459 aa19.55■□□□□ 0.72
HOMER3-204ENST00000539827 PMPCAQ10713 525 aa19.55■□□□□ 0.72
HOMER3-204ENST00000539827 AWAT2Q6E213 333 aa19.55■□□□□ 0.72
HOMER3-204ENST00000539827 GCNT2Q8N0V5 402 aa19.55■□□□□ 0.72
HOMER3-204ENST00000539827 C15orf40Q8WUR7 153 aa19.55■□□□□ 0.72
HOMER3-204ENST00000539827 SARAFQ96BY9 339 aa19.55■□□□□ 0.72
HOMER3-204ENST00000539827 GP6Q9HCN6 339 aa19.55■□□□□ 0.72
HOMER3-204ENST00000539827 NPAP1Q9NZP6 1156 aa19.55■□□□□ 0.72
HOMER3-204ENST00000539827 PAIP2BQ9ULR5 123 aaKnown RBP19.55■□□□□ 0.72
HOMER3-204ENST00000539827 CENPXA8MT69 81 aa19.54■□□□□ 0.72
HOMER3-204ENST00000539827 SLC6A1P30531 599 aa19.54■□□□□ 0.72
HOMER3-204ENST00000539827 OR3A2P47893 321 aa19.54■□□□□ 0.72
HOMER3-204ENST00000539827 MRPS10P82664 201 aaKnown RBP19.54■□□□□ 0.72
HOMER3-204ENST00000539827 UBE2V2Q15819 145 aa19.54■□□□□ 0.72
HOMER3-204ENST00000539827 AGAP6Q5VW22 663 aa19.54■□□□□ 0.72
HOMER3-204ENST00000539827 FBXW9Q5XUX1 488 aa19.54■□□□□ 0.72
HOMER3-204ENST00000539827 MED12LQ86YW9 2145 aa19.54■□□□□ 0.72
HOMER3-204ENST00000539827 UPRTQ96BW1 309 aa19.54■□□□□ 0.72
HOMER3-204ENST00000539827 SS18L1O75177 396 aaPredicted RBP19.53■□□□□ 0.72
HOMER3-204ENST00000539827 OR3A4PP47883 348 aa19.53■□□□□ 0.72
HOMER3-204ENST00000539827 GUCA2AQ02747 115 aa19.53■□□□□ 0.72
HOMER3-204ENST00000539827 PLA1AQ53H76 456 aa19.53■□□□□ 0.72
HOMER3-204ENST00000539827 Q6ZS92 163 aa19.53■□□□□ 0.72
HOMER3-204ENST00000539827 PAQR4Q8N4S7 273 aaPredicted RBP19.53■□□□□ 0.72
HOMER3-204ENST00000539827 CCDC54Q8NEL0 328 aa19.53■□□□□ 0.72
HOMER3-204ENST00000539827 ITFG2Q969R8 447 aa19.53■□□□□ 0.72
HOMER3-204ENST00000539827 FAM46BQ96A09 425 aa19.53■□□□□ 0.72
HOMER3-204ENST00000539827 GPER1Q99527 375 aa19.53■□□□□ 0.72
HOMER3-204ENST00000539827 RAB22AQ9UL26 194 aa19.53■□□□□ 0.72
HOMER3-204ENST00000539827 MRPS28Q9Y2Q9 187 aaKnown RBP19.53■□□□□ 0.72
HOMER3-204ENST00000539827 RBMX2Q9Y388 322 aaKnown RBP19.53■□□□□ 0.72
HOMER3-204ENST00000539827 ZFHX4Q86UP3 3567 aa19.53■□□□□ 0.72
HOMER3-204ENST00000539827 A0A0B4J293 547 aa19.53■□□□□ 0.72
HOMER3-204ENST00000539827 TPPPO94811 219 aa19.53■□□□□ 0.72
HOMER3-204ENST00000539827 BPNT1O95861 308 aa19.53■□□□□ 0.72
HOMER3-204ENST00000539827 VSIG8P0DPA2 414 aa19.53■□□□□ 0.72
HOMER3-204ENST00000539827 ACKR3P25106 362 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms