RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, human

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDB1-215	ENST00000539712	PPIAL4A	Q9Y536	164 aa		14.01	□□□□□ -0.17
DDB1-215	ENST00000539712	DOCK11	Q5JSL3	2073 aa		14.01	□□□□□ -0.17
DDB1-215	ENST00000539712	LRRC30	A6NM36	301 aa		14	□□□□□ -0.17
DDB1-215	ENST00000539712	TNFRSF13B	O14836	293 aa	Predicted RBP	14	□□□□□ -0.17
DDB1-215	ENST00000539712	GMDS	O60547	372 aa		14	□□□□□ -0.17
DDB1-215	ENST00000539712	RPS2	P15880	293 aa	Known RBP	14	□□□□□ -0.17
DDB1-215	ENST00000539712	POU1F1	P28069	291 aa		14	□□□□□ -0.17
DDB1-215	ENST00000539712	OPRL1	P41146	370 aa		14	□□□□□ -0.17
DDB1-215	ENST00000539712	EIF2B1	Q14232	305 aa	Known RBP	14	□□□□□ -0.17
DDB1-215	ENST00000539712	TAF13	Q15543	124 aa		14	□□□□□ -0.17
DDB1-215	ENST00000539712	OR8G1	Q15617	311 aa		14	□□□□□ -0.17
DDB1-215	ENST00000539712	DNAL1	Q4LDG9	190 aa		14	□□□□□ -0.17
DDB1-215	ENST00000539712	KLHL12	Q53G59	568 aa		14	□□□□□ -0.17
DDB1-215	ENST00000539712	PLBD1	Q6P4A8	553 aa		14	□□□□□ -0.17
DDB1-215	ENST00000539712	ZNF841	Q6ZN19	808 aa		14	□□□□□ -0.17
DDB1-215	ENST00000539712	ERI1	Q8IV48	349 aa	Known RBP	14	□□□□□ -0.17
DDB1-215	ENST00000539712	ZDHHC22	Q8N966	263 aa		14	□□□□□ -0.17
DDB1-215	ENST00000539712	OR56B2P	Q8NGI1	322 aa		14	□□□□□ -0.17
DDB1-215	ENST00000539712	SSBP3	Q9BWW4	388 aa	Predicted RBP	14	□□□□□ -0.17
DDB1-215	ENST00000539712	SLC22A4	Q9H015	551 aa		14	□□□□□ -0.17
DDB1-215	ENST00000539712	MIOX	Q9UGB7	285 aa		14	□□□□□ -0.17
DDB1-215	ENST00000539712	AUP1	Q9Y679	476 aa		14	□□□□□ -0.17
DDB1-215	ENST00000539712	GGT3P	A6NGU5	568 aa		13.99	□□□□□ -0.17
DDB1-215	ENST00000539712	FKBP6	O75344	327 aa		13.99	□□□□□ -0.17
DDB1-215	ENST00000539712	OSM	P13725	252 aa		13.99	□□□□□ -0.17
DDB1-215	ENST00000539712	HOXB6	P17509	224 aa	Known RBP	13.99	□□□□□ -0.17
DDB1-215	ENST00000539712	PSMB10	P40306	273 aa		13.99	□□□□□ -0.17
DDB1-215	ENST00000539712	CX3CR1	P49238	355 aa		13.99	□□□□□ -0.17
DDB1-215	ENST00000539712	GRB2	P62993	217 aa	Known RBP	13.99	□□□□□ -0.17
DDB1-215	ENST00000539712	CBX1	P83916	185 aa		13.99	□□□□□ -0.17
DDB1-215	ENST00000539712	FAM3A	P98173	230 aa		13.99	□□□□□ -0.17
DDB1-215	ENST00000539712	FLOT2	Q14254	428 aa		13.99	□□□□□ -0.17
DDB1-215	ENST00000539712	RHOU	Q7L0Q8	258 aa		13.99	□□□□□ -0.17
DDB1-215	ENST00000539712	SLC16A9	Q7RTY1	509 aa		13.99	□□□□□ -0.17
DDB1-215	ENST00000539712	SPATA24	Q86W54	205 aa		13.99	□□□□□ -0.17
DDB1-215	ENST00000539712	C1orf87	Q8N0U7	546 aa		13.99	□□□□□ -0.17
DDB1-215	ENST00000539712	BCL6B	Q8N143	479 aa	Predicted RBP	13.99	□□□□□ -0.17
DDB1-215	ENST00000539712	PLPP7	Q8NBV4	271 aa		13.99	□□□□□ -0.17
DDB1-215	ENST00000539712	OR6N2	Q8NGY6	317 aa		13.99	□□□□□ -0.17
DDB1-215	ENST00000539712	FAM216A	Q8WUB2	273 aa		13.99	□□□□□ -0.17
DDB1-215	ENST00000539712	ZMYND19	Q96E35	227 aa	Predicted RBP	13.99	□□□□□ -0.17
DDB1-215	ENST00000539712	NEIL1	Q96FI4	390 aa	Predicted RBP	13.99	□□□□□ -0.17
DDB1-215	ENST00000539712	ADAT1	Q9BUB4	502 aa	Known RBP	13.99	□□□□□ -0.17
DDB1-215	ENST00000539712	CADM1	Q9BY67	442 aa	Known RBP	13.99	□□□□□ -0.17
DDB1-215	ENST00000539712	OR51V1	Q9H2C8	321 aa		13.99	□□□□□ -0.17
DDB1-215	ENST00000539712	PPP1R3E	Q9H7J1	279 aa		13.99	□□□□□ -0.17
DDB1-215	ENST00000539712	DNAJB9	Q9UBS3	223 aa		13.99	□□□□□ -0.17
DDB1-215	ENST00000539712	ZNF69	Q9UC07	566 aa		13.99	□□□□□ -0.17
DDB1-215	ENST00000539712	KLHDC2	Q9Y2U9	406 aa		13.99	□□□□□ -0.17
DDB1-215	ENST00000539712	N6AMT1	Q9Y5N5	214 aa		13.99	□□□□□ -0.17
DDB1-215	ENST00000539712	GNGT2	O14610	69 aa		13.98	□□□□□ -0.17
DDB1-215	ENST00000539712	GSC2	O15499	205 aa		13.98	□□□□□ -0.17
DDB1-215	ENST00000539712	XRCC2	O43543	280 aa		13.98	□□□□□ -0.17
DDB1-215	ENST00000539712	DNAJC8	O75937	253 aa	Predicted RBP	13.98	□□□□□ -0.17
DDB1-215	ENST00000539712	SLC2A5	P22732	501 aa		13.98	□□□□□ -0.17
DDB1-215	ENST00000539712	SLC15A1	P46059	708 aa		13.98	□□□□□ -0.17
DDB1-215	ENST00000539712	ZNF121	P58317	390 aa	Predicted RBP	13.98	□□□□□ -0.17
DDB1-215	ENST00000539712	TMEM236	Q5W0B7	351 aa		13.98	□□□□□ -0.17
DDB1-215	ENST00000539712	DCDC5	Q6ZRR9	648 aa		13.98	□□□□□ -0.17
DDB1-215	ENST00000539712	ZNF826P	Q6ZT77	177 aa		13.98	□□□□□ -0.17
DDB1-215	ENST00000539712	WDR86	Q86TI4	376 aa		13.98	□□□□□ -0.17
DDB1-215	ENST00000539712	CPO	Q8IVL8	374 aa		13.98	□□□□□ -0.17
DDB1-215	ENST00000539712	C11orf53	Q8IXP5	236 aa		13.98	□□□□□ -0.17
DDB1-215	ENST00000539712	BBS1	Q8NFJ9	593 aa		13.98	□□□□□ -0.17
DDB1-215	ENST00000539712	OR11L1	Q8NGX0	322 aa		13.98	□□□□□ -0.17
DDB1-215	ENST00000539712	OTOS	Q8NHW6	89 aa		13.98	□□□□□ -0.17
DDB1-215	ENST00000539712	UTP4	Q969X6	686 aa	Known RBP	13.98	□□□□□ -0.17
DDB1-215	ENST00000539712	OTULIN	Q96BN8	352 aa		13.98	□□□□□ -0.17
DDB1-215	ENST00000539712	SUCNR1	Q9BXA5	334 aa		13.98	□□□□□ -0.17
DDB1-215	ENST00000539712	TOR3A	Q9H497	397 aa		13.98	□□□□□ -0.17
DDB1-215	ENST00000539712	OPA3	Q9H6K4	179 aa		13.98	□□□□□ -0.17
DDB1-215	ENST00000539712	RNF7	Q9UBF6	113 aa		13.98	□□□□□ -0.17
DDB1-215	ENST00000539712	OR5V1	Q9UGF6	321 aa		13.98	□□□□□ -0.17
DDB1-215	ENST00000539712	NUP50	Q9UKX7	468 aa		13.98	□□□□□ -0.17
DDB1-215	ENST00000539712	PKD1L1	Q8TDX9	2849 aa		13.97	□□□□□ -0.17
DDB1-215	ENST00000539712	IGHV2-70D	A0A0C4DH43	119 aa		13.97	□□□□□ -0.17
DDB1-215	ENST00000539712	KIR2DS1	A0A191URI9	304 aa		13.97	□□□□□ -0.17
DDB1-215	ENST00000539712	SELENOF	O60613	162 aa		13.97	□□□□□ -0.17
DDB1-215	ENST00000539712	E2F6	O75461	281 aa		13.97	□□□□□ -0.17
DDB1-215	ENST00000539712	FCN3	O75636	299 aa		13.97	□□□□□ -0.17
DDB1-215	ENST00000539712	LHB	P01229	141 aa		13.97	□□□□□ -0.17
DDB1-215	ENST00000539712	PITPNB	P48739	271 aa		13.97	□□□□□ -0.17
DDB1-215	ENST00000539712	COMP	P49747	757 aa	Predicted RBP	13.97	□□□□□ -0.17
DDB1-215	ENST00000539712	WDR25	Q64LD2	544 aa	Predicted RBP	13.97	□□□□□ -0.17
DDB1-215	ENST00000539712	FAM57B	Q71RH2	274 aa		13.97	□□□□□ -0.17
DDB1-215	ENST00000539712	SHF	Q7M4L6	423 aa		13.97	□□□□□ -0.17
DDB1-215	ENST00000539712	BPIFB2	Q8N4F0	458 aa		13.97	□□□□□ -0.17
DDB1-215	ENST00000539712	RAB40A	Q8WXH6	277 aa		13.97	□□□□□ -0.17
DDB1-215	ENST00000539712	C1orf147	Q96MC9	270 aa	Predicted RBP	13.97	□□□□□ -0.17
DDB1-215	ENST00000539712	ZNF48	Q96MX3	618 aa	Predicted RBP	13.97	□□□□□ -0.17
DDB1-215	ENST00000539712	FN3KRP	Q9HA64	309 aa		13.97	□□□□□ -0.17
DDB1-215	ENST00000539712	SLC25A19	Q9HC21	320 aa		13.97	□□□□□ -0.17
DDB1-215	ENST00000539712	CTSZ	Q9UBR2	303 aa		13.97	□□□□□ -0.17
DDB1-215	ENST00000539712	NOP16	Q9Y3C1	178 aa	Known RBP	13.97	□□□□□ -0.17
DDB1-215	ENST00000539712	SOX21	Q9Y651	276 aa	Predicted RBP	13.97	□□□□□ -0.17
DDB1-215	ENST00000539712	hCG_38984	A0A1B0GV85	526 aa		13.96	□□□□□ -0.17
DDB1-215	ENST00000539712	TMEM89	A2RUT3	159 aa		13.96	□□□□□ -0.17
DDB1-215	ENST00000539712	C22orf46	C9J442	243 aa		13.96	□□□□□ -0.17
DDB1-215	ENST00000539712	PRR23D1	E9PI22	279 aa	Predicted RBP	13.96	□□□□□ -0.17
DDB1-215	ENST00000539712	PRODH	O43272	600 aa		13.96	□□□□□ -0.17

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