RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 LHFPL1Q86WI0 220 aa11.77□□□□□ -0.53
UBE3B-209ENST00000539584 ZSCAN4Q8NAM6 433 aaPredicted RBP11.77□□□□□ -0.53
UBE3B-209ENST00000539584 OR13C9Q8NGT0 318 aa11.77□□□□□ -0.53
UBE3B-209ENST00000539584 ADAMTS17Q8TE56 1095 aa11.77□□□□□ -0.53
UBE3B-209ENST00000539584 MRPL13Q9BYD1 178 aaKnown RBP11.77□□□□□ -0.53
UBE3B-209ENST00000539584 MRPS28Q9Y2Q9 187 aaKnown RBP11.77□□□□□ -0.53
UBE3B-209ENST00000539584 F5P12259 2224 aa11.77□□□□□ -0.53
UBE3B-209ENST00000539584 ADAM10O14672 748 aa11.76□□□□□ -0.53
UBE3B-209ENST00000539584 CA11O75493 328 aa11.76□□□□□ -0.53
UBE3B-209ENST00000539584 CCL1P22362 96 aa11.76□□□□□ -0.53
UBE3B-209ENST00000539584 CAV2P51636 162 aa11.76□□□□□ -0.53
UBE3B-209ENST00000539584 GUCA2BQ16661 112 aa11.76□□□□□ -0.53
UBE3B-209ENST00000539584 GLIPR1L1Q6UWM5 242 aa11.76□□□□□ -0.53
UBE3B-209ENST00000539584 CLEC18BQ6UXF7 455 aa11.76□□□□□ -0.53
UBE3B-209ENST00000539584 TMPRSS9Q7Z410 1059 aa11.76□□□□□ -0.53
UBE3B-209ENST00000539584 C7orf61Q8IZ16 206 aa11.76□□□□□ -0.53
UBE3B-209ENST00000539584 OR5H2Q8NGV7 314 aa11.76□□□□□ -0.53
UBE3B-209ENST00000539584 OR2AJ1Q8NGZ0 328 aa11.76□□□□□ -0.53
UBE3B-209ENST00000539584 DNAJA3Q96EY1 480 aa11.76□□□□□ -0.53
UBE3B-209ENST00000539584 C5orf34Q96MH7 638 aa11.76□□□□□ -0.53
UBE3B-209ENST00000539584 TMEM59Q9BXS4 323 aa11.76□□□□□ -0.53
UBE3B-209ENST00000539584 CD207Q9UJ71 328 aa11.76□□□□□ -0.53
UBE3B-209ENST00000539584 ZNF98A6NK75 572 aa11.76□□□□□ -0.53
UBE3B-209ENST00000539584 ZNF705EA8MWA4 302 aaPredicted RBP11.76□□□□□ -0.53
UBE3B-209ENST00000539584 SMAD9O15198 467 aaKnown RBP11.76□□□□□ -0.53
UBE3B-209ENST00000539584 CDC14BO60729 498 aa11.76□□□□□ -0.53
UBE3B-209ENST00000539584 CSTBP04080 98 aaKnown RBP11.76□□□□□ -0.53
UBE3B-209ENST00000539584 IFNA4P05014 189 aa11.76□□□□□ -0.53
UBE3B-209ENST00000539584 ABOP16442 354 aa11.76□□□□□ -0.53
UBE3B-209ENST00000539584 ALDH3B1P43353 468 aa11.76□□□□□ -0.53
UBE3B-209ENST00000539584 ARHGDIBP52566 201 aa11.76□□□□□ -0.53
UBE3B-209ENST00000539584 SQSTM1Q13501 440 aa11.76□□□□□ -0.53
UBE3B-209ENST00000539584 SLC22A6Q4U2R8 563 aa11.76□□□□□ -0.53
UBE3B-209ENST00000539584 SLC25A53Q5H9E4 307 aa11.76□□□□□ -0.53
UBE3B-209ENST00000539584 ZNF585AQ6P3V2 769 aa11.76□□□□□ -0.53
UBE3B-209ENST00000539584 COX15Q7KZN9 410 aa11.76□□□□□ -0.53
UBE3B-209ENST00000539584 FAM89BQ8N5H3 189 aa11.76□□□□□ -0.53
UBE3B-209ENST00000539584 LMX1AQ8TE12 382 aa11.76□□□□□ -0.53
UBE3B-209ENST00000539584 EMG1Q92979 244 aaKnown RBP11.76□□□□□ -0.53
UBE3B-209ENST00000539584 TMEM41AQ96HV5 264 aa11.76□□□□□ -0.53
UBE3B-209ENST00000539584 NECAB3Q96P71 396 aaPredicted RBP11.76□□□□□ -0.53
UBE3B-209ENST00000539584 SLC26A1Q9H2B4 701 aa11.76□□□□□ -0.53
UBE3B-209ENST00000539584 TREM1Q9NP99 234 aa11.76□□□□□ -0.53
UBE3B-209ENST00000539584 CLEC1BQ9P126 229 aa11.76□□□□□ -0.53
UBE3B-209ENST00000539584 SEMA5BQ9P283 1151 aa11.76□□□□□ -0.53
UBE3B-209ENST00000539584 CTSFQ9UBX1 484 aa11.76□□□□□ -0.53
UBE3B-209ENST00000539584 ATPIF1Q9UII2 106 aa11.76□□□□□ -0.53
UBE3B-209ENST00000539584 A0A1B0GX78 115 aa11.75□□□□□ -0.53
UBE3B-209ENST00000539584 LIPT2A6NK58 231 aa11.75□□□□□ -0.53
UBE3B-209ENST00000539584 H0YIZ8 118 aa11.75□□□□□ -0.53
UBE3B-209ENST00000539584 MFNGO00587 321 aa11.75□□□□□ -0.53
UBE3B-209ENST00000539584 ZNF217O75362 1048 aa11.75□□□□□ -0.53
UBE3B-209ENST00000539584 WISP1O95388 367 aa11.75□□□□□ -0.53
UBE3B-209ENST00000539584 GIMD1P0DJR0 217 aa11.75□□□□□ -0.53
UBE3B-209ENST00000539584 RNF4P78317 190 aa11.75□□□□□ -0.53
UBE3B-209ENST00000539584 IL15RAQ13261 267 aa11.75□□□□□ -0.53
UBE3B-209ENST00000539584 HMGN3Q15651 99 aa11.75□□□□□ -0.53
UBE3B-209ENST00000539584 HYAL4Q2M3T9 481 aa11.75□□□□□ -0.53
UBE3B-209ENST00000539584 C14orf28Q4W4Y0 310 aa11.75□□□□□ -0.53
UBE3B-209ENST00000539584 DOK3Q7L591 496 aa11.75□□□□□ -0.53
UBE3B-209ENST00000539584 PLXDC1Q8IUK5 500 aa11.75□□□□□ -0.53
UBE3B-209ENST00000539584 D2HGDHQ8N465 521 aa11.75□□□□□ -0.53
UBE3B-209ENST00000539584 PNLDC1Q8NA58 520 aaKnown RBP11.75□□□□□ -0.53
UBE3B-209ENST00000539584 DMBX1Q8NFW5 382 aa11.75□□□□□ -0.53
UBE3B-209ENST00000539584 OR4A4PQ8NGN8 299 aa11.75□□□□□ -0.53
UBE3B-209ENST00000539584 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.75□□□□□ -0.53
UBE3B-209ENST00000539584 TMED6Q8WW62 240 aa11.75□□□□□ -0.53
UBE3B-209ENST00000539584 TMEM230Q96A57 120 aa11.75□□□□□ -0.53
UBE3B-209ENST00000539584 RRNAD1Q96FB5 475 aaKnown RBP11.75□□□□□ -0.53
UBE3B-209ENST00000539584 MRGPRX4Q96LA9 322 aa11.75□□□□□ -0.53
UBE3B-209ENST00000539584 C1orf147Q96MC9 270 aaPredicted RBP11.75□□□□□ -0.53
UBE3B-209ENST00000539584 VN1R1Q9GZP7 353 aa11.75□□□□□ -0.53
UBE3B-209ENST00000539584 SLC5A7Q9GZV3 580 aa11.75□□□□□ -0.53
UBE3B-209ENST00000539584 TLNRD1Q9H1K6 362 aa11.75□□□□□ -0.53
UBE3B-209ENST00000539584 SERINC1Q9NRX5 453 aa11.75□□□□□ -0.53
UBE3B-209ENST00000539584 SUSD2Q9UGT4 822 aa11.75□□□□□ -0.53
UBE3B-209ENST00000539584 IGKV1D-43A0A0B4J1Z2 117 aa11.74□□□□□ -0.53
UBE3B-209ENST00000539584 C17orf51A8MQB3 221 aa11.74□□□□□ -0.53
UBE3B-209ENST00000539584 MBTPS2O43462 519 aa11.74□□□□□ -0.53
UBE3B-209ENST00000539584 IGHG1P01857 330 aa11.74□□□□□ -0.53
UBE3B-209ENST00000539584 NR2C1P13056 603 aa11.74□□□□□ -0.53
UBE3B-209ENST00000539584 FKBP2P26885 142 aaKnown RBP11.74□□□□□ -0.53
UBE3B-209ENST00000539584 ADH6P28332 368 aa11.74□□□□□ -0.53
UBE3B-209ENST00000539584 OR3A2P47893 321 aa11.74□□□□□ -0.53
UBE3B-209ENST00000539584 TSC22D1Q15714 1073 aa11.74□□□□□ -0.53
UBE3B-209ENST00000539584 KCNMB1Q16558 191 aa11.74□□□□□ -0.53
UBE3B-209ENST00000539584 KMT5CQ86Y97 462 aa11.74□□□□□ -0.53
UBE3B-209ENST00000539584 KDF1Q8NAX2 398 aaPredicted RBP11.74□□□□□ -0.53
UBE3B-209ENST00000539584 CCDC54Q8NEL0 328 aa11.74□□□□□ -0.53
UBE3B-209ENST00000539584 GLYATL2Q8WU03 294 aa11.74□□□□□ -0.53
UBE3B-209ENST00000539584 ARL5BQ96KC2 179 aa11.74□□□□□ -0.53
UBE3B-209ENST00000539584 NRIP2Q9BQI9 281 aa11.74□□□□□ -0.53
UBE3B-209ENST00000539584 TGIF2Q9GZN2 237 aa11.74□□□□□ -0.53
UBE3B-209ENST00000539584 CHRDQ9H2X0 955 aa11.74□□□□□ -0.53
UBE3B-209ENST00000539584 RHOFQ9HBH0 211 aa11.74□□□□□ -0.53
UBE3B-209ENST00000539584 RCC2Q9P258 522 aaKnown RBP11.74□□□□□ -0.53
UBE3B-209ENST00000539584 DHCR7Q9UBM7 475 aaKnown RBP11.74□□□□□ -0.53
UBE3B-209ENST00000539584 KIAA0100Q14667 2235 aaKnown RBP11.74□□□□□ -0.53
UBE3B-209ENST00000539584 LOC101059948A0A1B0GTJ6 334 aa11.74□□□□□ -0.53
UBE3B-209ENST00000539584 RHPN2P1A8MT19 583 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms