RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 TMEM14AQ9Y6G1 99 aa13.35□□□□□ -0.27
RPAIN-206ENST00000539417 IGHV1-69-2A0A0G2JMI3 117 aa13.34□□□□□ -0.27
RPAIN-206ENST00000539417 hCG_38984A0A1B0GV85 526 aa13.34□□□□□ -0.27
RPAIN-206ENST00000539417 TMEM269A0A1B0GVZ9 245 aa13.34□□□□□ -0.27
RPAIN-206ENST00000539417 A0A1B0GWJ7 208 aa13.34□□□□□ -0.27
RPAIN-206ENST00000539417 F5H5P2 479 aa13.34□□□□□ -0.27
RPAIN-206ENST00000539417 LY6G6DO95868 133 aa13.34□□□□□ -0.27
RPAIN-206ENST00000539417 CSF3P09919 207 aa13.34□□□□□ -0.27
RPAIN-206ENST00000539417 OR2T7P0C7T2 308 aa13.34□□□□□ -0.27
RPAIN-206ENST00000539417 DBTP11182 482 aaKnown RBP13.34□□□□□ -0.27
RPAIN-206ENST00000539417 CA6P23280 308 aa13.34□□□□□ -0.27
RPAIN-206ENST00000539417 GIFP27352 417 aa13.34□□□□□ -0.27
RPAIN-206ENST00000539417 CRYBB2P43320 205 aa13.34□□□□□ -0.27
RPAIN-206ENST00000539417 IL5RAQ01344 420 aa13.34□□□□□ -0.27
RPAIN-206ENST00000539417 TMED1Q13445 227 aa13.34□□□□□ -0.27
RPAIN-206ENST00000539417 TIGD6Q17RP2 521 aa13.34□□□□□ -0.27
RPAIN-206ENST00000539417 FAM209AQ5JX71 171 aa13.34□□□□□ -0.27
RPAIN-206ENST00000539417 MEDAGQ5VYS4 303 aa13.34□□□□□ -0.27
RPAIN-206ENST00000539417 DEGS2Q6QHC5 323 aa13.34□□□□□ -0.27
RPAIN-206ENST00000539417 DHRSXQ8N5I4 330 aa13.34□□□□□ -0.27
RPAIN-206ENST00000539417 OR2T27Q8NH04 317 aa13.34□□□□□ -0.27
RPAIN-206ENST00000539417 ASB17Q8WXJ9 295 aa13.34□□□□□ -0.27
RPAIN-206ENST00000539417 PIMREGQ9BSJ6 248 aa13.34□□□□□ -0.27
RPAIN-206ENST00000539417 MROQ9BYG7 248 aa13.34□□□□□ -0.27
RPAIN-206ENST00000539417 CGGBP1Q9UFW8 167 aaPredicted RBP13.34□□□□□ -0.27
RPAIN-206ENST00000539417 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.34□□□□□ -0.27
RPAIN-206ENST00000539417 MYRFQ9Y2G1 1151 aa13.34□□□□□ -0.27
RPAIN-206ENST00000539417 YLPM1P49750 1951 aaKnown RBP13.34□□□□□ -0.27
RPAIN-206ENST00000539417 TANC2Q9HCD6 1990 aa13.33□□□□□ -0.28
RPAIN-206ENST00000539417 LRP5LA4QPB2 252 aa13.33□□□□□ -0.28
RPAIN-206ENST00000539417 GGT3PA6NGU5 568 aa13.33□□□□□ -0.28
RPAIN-206ENST00000539417 XRCC2O43543 280 aa13.33□□□□□ -0.28
RPAIN-206ENST00000539417 FOSL1P15407 271 aa13.33□□□□□ -0.28
RPAIN-206ENST00000539417 SLC25A16P16260 332 aa13.33□□□□□ -0.28
RPAIN-206ENST00000539417 ACKR3P25106 362 aa13.33□□□□□ -0.28
RPAIN-206ENST00000539417 IL2RGP31785 369 aa13.33□□□□□ -0.28
RPAIN-206ENST00000539417 ATP6V1E1P36543 226 aa13.33□□□□□ -0.28
RPAIN-206ENST00000539417 RIDAP52758 137 aaKnown RBP13.33□□□□□ -0.28
RPAIN-206ENST00000539417 POU4F2Q12837 409 aa13.33□□□□□ -0.28
RPAIN-206ENST00000539417 LAIR2Q6ISS4 152 aa13.33□□□□□ -0.28
RPAIN-206ENST00000539417 SPRYD4Q8WW59 207 aaPredicted RBP13.33□□□□□ -0.28
RPAIN-206ENST00000539417 OR2V2Q96R30 315 aa13.33□□□□□ -0.28
RPAIN-206ENST00000539417 MNTQ99583 582 aa13.33□□□□□ -0.28
RPAIN-206ENST00000539417 ADI1Q9BV57 179 aa13.33□□□□□ -0.28
RPAIN-206ENST00000539417 PBOV1Q9GZY1 135 aa13.33□□□□□ -0.28
RPAIN-206ENST00000539417 OR10A2Q9H208 303 aa13.33□□□□□ -0.28
RPAIN-206ENST00000539417 CHODLQ9H9P2 273 aa13.33□□□□□ -0.28
RPAIN-206ENST00000539417 MYOZ1Q9NP98 299 aaPredicted RBP13.33□□□□□ -0.28
RPAIN-206ENST00000539417 G6PC2Q9NQR9 355 aa13.33□□□□□ -0.28
RPAIN-206ENST00000539417 TMEM100Q9NV29 134 aa13.33□□□□□ -0.28
RPAIN-206ENST00000539417 EXOGQ9Y2C4 368 aaKnown RBP13.33□□□□□ -0.28
RPAIN-206ENST00000539417 NDUFS8O00217 210 aa13.32□□□□□ -0.28
RPAIN-206ENST00000539417 ZNF254O75437 659 aa13.32□□□□□ -0.28
RPAIN-206ENST00000539417 RPP14O95059 124 aaKnown RBP13.32□□□□□ -0.28
RPAIN-206ENST00000539417 APOC1P02654 83 aa13.32□□□□□ -0.28
RPAIN-206ENST00000539417 ACHEP22303 614 aa13.32□□□□□ -0.28
RPAIN-206ENST00000539417 GSK3AP49840 483 aa13.32□□□□□ -0.28
RPAIN-206ENST00000539417 AQP4P55087 323 aa13.32□□□□□ -0.28
RPAIN-206ENST00000539417 ISL1P61371 349 aa13.32□□□□□ -0.28
RPAIN-206ENST00000539417 HOXA4Q00056 320 aaPredicted RBP13.32□□□□□ -0.28
RPAIN-206ENST00000539417 EGR3Q06889 387 aa13.32□□□□□ -0.28
RPAIN-206ENST00000539417 MAB21L1Q13394 359 aa13.32□□□□□ -0.28
RPAIN-206ENST00000539417 TP53I3Q53FA7 332 aa13.32□□□□□ -0.28
RPAIN-206ENST00000539417 AVPI1Q5T686 147 aa13.32□□□□□ -0.28
RPAIN-206ENST00000539417 OR52H1Q8NGJ2 320 aa13.32□□□□□ -0.28
RPAIN-206ENST00000539417 OR13G1Q8NGZ3 307 aa13.32□□□□□ -0.28
RPAIN-206ENST00000539417 ZNF420Q8TAQ5 688 aaPredicted RBP13.32□□□□□ -0.28
RPAIN-206ENST00000539417 MEGF10Q96KG7 1140 aa13.32□□□□□ -0.28
RPAIN-206ENST00000539417 SIGLEC11Q96RL6 698 aa13.32□□□□□ -0.28
RPAIN-206ENST00000539417 ZNF649Q9BS31 505 aa13.32□□□□□ -0.28
RPAIN-206ENST00000539417 NARFLQ9H6Q4 476 aa13.32□□□□□ -0.28
RPAIN-206ENST00000539417 NIPAL2Q9H841 368 aa13.32□□□□□ -0.28
RPAIN-206ENST00000539417 C8orf4Q9NR00 106 aa13.32□□□□□ -0.28
RPAIN-206ENST00000539417 SLC22A13Q9Y226 551 aa13.32□□□□□ -0.28
RPAIN-206ENST00000539417 PHYHO14832 338 aa13.31□□□□□ -0.28
RPAIN-206ENST00000539417 IGLV3-1P01715 115 aa13.31□□□□□ -0.28
RPAIN-206ENST00000539417 TTRP02766 147 aa13.31□□□□□ -0.28
RPAIN-206ENST00000539417 USF1P22415 310 aaPredicted RBP13.31□□□□□ -0.28
RPAIN-206ENST00000539417 DCTDP32321 178 aa13.31□□□□□ -0.28
RPAIN-206ENST00000539417 CAPGP40121 348 aa13.31□□□□□ -0.28
RPAIN-206ENST00000539417 PSMB10P40306 273 aa13.31□□□□□ -0.28
RPAIN-206ENST00000539417 PMELP40967 661 aa13.31□□□□□ -0.28
RPAIN-206ENST00000539417 MMP16P51512 607 aa13.31□□□□□ -0.28
RPAIN-206ENST00000539417 MRPS11P82912 194 aaKnown RBP13.31□□□□□ -0.28
RPAIN-206ENST00000539417 LOXL1Q08397 574 aaPredicted RBP13.31□□□□□ -0.28
RPAIN-206ENST00000539417 ZMAT1Q5H9K5 638 aa13.31□□□□□ -0.28
RPAIN-206ENST00000539417 LIPNQ5VXI9 398 aa13.31□□□□□ -0.28
RPAIN-206ENST00000539417 TTC23Q5W5X9 447 aa13.31□□□□□ -0.28
RPAIN-206ENST00000539417 YIPF7Q8N8F6 280 aa13.31□□□□□ -0.28
RPAIN-206ENST00000539417 OR51E1Q8TCB6 317 aa13.31□□□□□ -0.28
RPAIN-206ENST00000539417 CCL17Q92583 94 aa13.31□□□□□ -0.28
RPAIN-206ENST00000539417 DIRC2Q96SL1 478 aa13.31□□□□□ -0.28
RPAIN-206ENST00000539417 ACOXLQ9NUZ1 547 aa13.31□□□□□ -0.28
RPAIN-206ENST00000539417 IL19Q9UHD0 177 aa13.31□□□□□ -0.28
RPAIN-206ENST00000539417 R4GMQ9 66 aa13.31□□□□□ -0.28
RPAIN-206ENST00000539417 DYSFO75923 2080 aa13.31□□□□□ -0.28
RPAIN-206ENST00000539417 LOC100289279A0A1B0GTE1 492 aa13.3□□□□□ -0.28
RPAIN-206ENST00000539417 METTL15A6NJ78 407 aa13.3□□□□□ -0.28
RPAIN-206ENST00000539417 PPIHO43447 177 aaKnown RBP13.3□□□□□ -0.28
RPAIN-206ENST00000539417 MPZL2O60487 215 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms