RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, human

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLTCL1-205	ENST00000538828	CSNK2A3	Q8NEV1	391 aa		10.37	□□□□□ -0.75
CLTCL1-205	ENST00000538828	ASB17	Q8WXJ9	295 aa		10.37	□□□□□ -0.75
CLTCL1-205	ENST00000538828	OTULIN	Q96BN8	352 aa		10.37	□□□□□ -0.75
CLTCL1-205	ENST00000538828	ZMYND19	Q96E35	227 aa	Predicted RBP	10.37	□□□□□ -0.75
CLTCL1-205	ENST00000538828	RBM4B	Q9BQ04	359 aa	Known RBP	10.37	□□□□□ -0.75
CLTCL1-205	ENST00000538828	GABARAPL3	Q9BY60	117 aa		10.37	□□□□□ -0.75
CLTCL1-205	ENST00000538828	OR10A2	Q9H208	303 aa		10.37	□□□□□ -0.75
CLTCL1-205	ENST00000538828	PATZ1	Q9HBE1	687 aa	Known RBP	10.37	□□□□□ -0.75
CLTCL1-205	ENST00000538828	ABCB9	Q9NP78	766 aa		10.37	□□□□□ -0.75
CLTCL1-205	ENST00000538828	G6PC2	Q9NQR9	355 aa		10.37	□□□□□ -0.75
CLTCL1-205	ENST00000538828	HIF1AN	Q9NWT6	349 aa		10.37	□□□□□ -0.75
CLTCL1-205	ENST00000538828	TVP23B	Q9NYZ1	205 aa		10.37	□□□□□ -0.75
CLTCL1-205	ENST00000538828	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	10.36	□□□□□ -0.75
CLTCL1-205	ENST00000538828	GGT3P	A6NGU5	568 aa		10.36	□□□□□ -0.75
CLTCL1-205	ENST00000538828		F5H0A9	414 aa	Predicted RBP	10.36	□□□□□ -0.75
CLTCL1-205	ENST00000538828	PHYH	O14832	338 aa		10.36	□□□□□ -0.75
CLTCL1-205	ENST00000538828	H2BFM	P0C1H6	154 aa		10.36	□□□□□ -0.75
CLTCL1-205	ENST00000538828	ATP6V1B1	P15313	513 aa		10.36	□□□□□ -0.75
CLTCL1-205	ENST00000538828	PSMA6	P60900	246 aa	Known RBP	10.36	□□□□□ -0.75
CLTCL1-205	ENST00000538828	MAB21L1	Q13394	359 aa		10.36	□□□□□ -0.75
CLTCL1-205	ENST00000538828	APOF	Q13790	326 aa		10.36	□□□□□ -0.75
CLTCL1-205	ENST00000538828	C11orf91	Q3C1V1	193 aa		10.36	□□□□□ -0.75
CLTCL1-205	ENST00000538828	SPRN	Q5BIV9	151 aa		10.36	□□□□□ -0.75
CLTCL1-205	ENST00000538828	AVPI1	Q5T686	147 aa		10.36	□□□□□ -0.75
CLTCL1-205	ENST00000538828	AADACL4	Q5VUY2	407 aa		10.36	□□□□□ -0.75
CLTCL1-205	ENST00000538828	TMEM236	Q5W0B7	351 aa		10.36	□□□□□ -0.75
CLTCL1-205	ENST00000538828	GID4	Q8IVV7	300 aa		10.36	□□□□□ -0.75
CLTCL1-205	ENST00000538828	OR10AD1	Q8NGE0	317 aa		10.36	□□□□□ -0.75
CLTCL1-205	ENST00000538828	TMEM163	Q8TC26	289 aa		10.36	□□□□□ -0.75
CLTCL1-205	ENST00000538828	TRUB1	Q8WWH5	349 aa	Known RBP	10.36	□□□□□ -0.75
CLTCL1-205	ENST00000538828	LRTOMT	Q8WZ04	291 aa		10.36	□□□□□ -0.75
CLTCL1-205	ENST00000538828	TRIM36	Q9NQ86	728 aa		10.36	□□□□□ -0.75
CLTCL1-205	ENST00000538828	C14orf119	Q9NWQ9	140 aa		10.36	□□□□□ -0.75
CLTCL1-205	ENST00000538828	H2AFY2	Q9P0M6	372 aa	Predicted RBP	10.36	□□□□□ -0.75
CLTCL1-205	ENST00000538828	LAMP5	Q9UJQ1	280 aa		10.36	□□□□□ -0.75
CLTCL1-205	ENST00000538828		A0A0A6YYJ9	748 aa		10.35	□□□□□ -0.75
CLTCL1-205	ENST00000538828		A0A0G2JMP0	313 aa		10.35	□□□□□ -0.75
CLTCL1-205	ENST00000538828		A0A0U1RQV5	110 aa		10.35	□□□□□ -0.75
CLTCL1-205	ENST00000538828		A0A0X1KG70	313 aa		10.35	□□□□□ -0.75
CLTCL1-205	ENST00000538828	hCG_38984	A0A1B0GV85	526 aa		10.35	□□□□□ -0.75
CLTCL1-205	ENST00000538828	CCDC182	A6NF36	153 aa		10.35	□□□□□ -0.75
CLTCL1-205	ENST00000538828	KIAA1324L	A8MWY0	1029 aa	Predicted RBP	10.35	□□□□□ -0.75
CLTCL1-205	ENST00000538828		F5H5P2	479 aa		10.35	□□□□□ -0.75
CLTCL1-205	ENST00000538828	NDUFA2	O43678	99 aa		10.35	□□□□□ -0.75
CLTCL1-205	ENST00000538828	PLPP2	O43688	288 aa		10.35	□□□□□ -0.75
CLTCL1-205	ENST00000538828	PNP	P00491	289 aa		10.35	□□□□□ -0.75
CLTCL1-205	ENST00000538828	CFHR2	P36980	270 aa		10.35	□□□□□ -0.75
CLTCL1-205	ENST00000538828	ZNF121	P58317	390 aa	Predicted RBP	10.35	□□□□□ -0.75
CLTCL1-205	ENST00000538828	RPS7	P62081	194 aa	Known RBP	10.35	□□□□□ -0.75
CLTCL1-205	ENST00000538828	FAM3A	P98173	230 aa		10.35	□□□□□ -0.75
CLTCL1-205	ENST00000538828	POU4F2	Q12837	409 aa		10.35	□□□□□ -0.75
CLTCL1-205	ENST00000538828	OR8G1	Q15617	311 aa		10.35	□□□□□ -0.75
CLTCL1-205	ENST00000538828	OR8B8	Q15620	311 aa		10.35	□□□□□ -0.75
CLTCL1-205	ENST00000538828	KCNJ8	Q15842	424 aa		10.35	□□□□□ -0.75
CLTCL1-205	ENST00000538828	TIGD6	Q17RP2	521 aa		10.35	□□□□□ -0.75
CLTCL1-205	ENST00000538828	MEPCE	Q7L2J0	689 aa	Known RBP	10.35	□□□□□ -0.75
CLTCL1-205	ENST00000538828	AMIGO2	Q86SJ2	522 aa		10.35	□□□□□ -0.75
CLTCL1-205	ENST00000538828	ZNF679	Q8IYX0	411 aa		10.35	□□□□□ -0.75
CLTCL1-205	ENST00000538828	RFLNB	Q8N5W9	214 aa		10.35	□□□□□ -0.75
CLTCL1-205	ENST00000538828	BHLHE23	Q8NDY6	225 aa		10.35	□□□□□ -0.75
CLTCL1-205	ENST00000538828	OR4M2	Q8NGB6	313 aa		10.35	□□□□□ -0.75
CLTCL1-205	ENST00000538828	OR8J1	Q8NGP2	316 aa		10.35	□□□□□ -0.75
CLTCL1-205	ENST00000538828	OR11L1	Q8NGX0	322 aa		10.35	□□□□□ -0.75
CLTCL1-205	ENST00000538828	THEM6	Q8WUY1	208 aa		10.35	□□□□□ -0.75
CLTCL1-205	ENST00000538828	SGK3	Q96BR1	496 aa		10.35	□□□□□ -0.75
CLTCL1-205	ENST00000538828	MRO	Q9BYG7	248 aa		10.35	□□□□□ -0.75
CLTCL1-205	ENST00000538828	NARFL	Q9H6Q4	476 aa		10.35	□□□□□ -0.75
CLTCL1-205	ENST00000538828	FN3KRP	Q9HA64	309 aa		10.35	□□□□□ -0.75
CLTCL1-205	ENST00000538828	USE1	Q9NZ43	259 aa		10.35	□□□□□ -0.75
CLTCL1-205	ENST00000538828	MIOX	Q9UGB7	285 aa		10.35	□□□□□ -0.75
CLTCL1-205	ENST00000538828	OAZ3	Q9UMX2	235 aa		10.35	□□□□□ -0.75
CLTCL1-205	ENST00000538828	PCDHB10	Q9UN67	800 aa		10.35	□□□□□ -0.75
CLTCL1-205	ENST00000538828	LRCH1	Q9Y2L9	728 aa		10.35	□□□□□ -0.75
CLTCL1-205	ENST00000538828	FBN1	P35555	2871 aa	Known RBP	10.34	□□□□□ -0.75
CLTCL1-205	ENST00000538828	ISPD	A4D126	451 aa		10.34	□□□□□ -0.75
CLTCL1-205	ENST00000538828	ANKRD30BL	A7E2S9	258 aa		10.34	□□□□□ -0.75
CLTCL1-205	ENST00000538828		H0YL77	283 aa		10.34	□□□□□ -0.75
CLTCL1-205	ENST00000538828	PRKY	O43930	277 aa		10.34	□□□□□ -0.75
CLTCL1-205	ENST00000538828	SELENOF	O60613	162 aa		10.34	□□□□□ -0.75
CLTCL1-205	ENST00000538828	ANXA2	P07355	339 aa	Known RBP	10.34	□□□□□ -0.75
CLTCL1-205	ENST00000538828	SBK2	P0C263	348 aa		10.34	□□□□□ -0.75
CLTCL1-205	ENST00000538828	IRF2	P14316	349 aa		10.34	□□□□□ -0.75
CLTCL1-205	ENST00000538828	ZMYND11	Q15326	602 aa		10.34	□□□□□ -0.75
CLTCL1-205	ENST00000538828	ZNF404	Q494X3	552 aa		10.34	□□□□□ -0.75
CLTCL1-205	ENST00000538828	BBS1	Q8NFJ9	593 aa		10.34	□□□□□ -0.75
CLTCL1-205	ENST00000538828	OR56B2P	Q8NGI1	322 aa		10.34	□□□□□ -0.75
CLTCL1-205	ENST00000538828	OR2AE1	Q8NHA4	323 aa		10.34	□□□□□ -0.75
CLTCL1-205	ENST00000538828	REEP6	Q96HR9	211 aa		10.34	□□□□□ -0.75
CLTCL1-205	ENST00000538828	AMELY	Q99218	206 aa		10.34	□□□□□ -0.75
CLTCL1-205	ENST00000538828	CNN2	Q99439	309 aa	Known RBP	10.34	□□□□□ -0.75
CLTCL1-205	ENST00000538828	CIB1	Q99828	191 aa		10.34	□□□□□ -0.75
CLTCL1-205	ENST00000538828	ADAT1	Q9BUB4	502 aa	Known RBP	10.34	□□□□□ -0.75
CLTCL1-205	ENST00000538828	RNPEPL1	Q9HAU8	725 aa		10.34	□□□□□ -0.75
CLTCL1-205	ENST00000538828	TMEM165	Q9HC07	324 aa		10.34	□□□□□ -0.75
CLTCL1-205	ENST00000538828	WARS2	Q9UGM6	360 aa	Known RBP	10.34	□□□□□ -0.75
CLTCL1-205	ENST00000538828	MPC1	Q9Y5U8	109 aa		10.34	□□□□□ -0.75
CLTCL1-205	ENST00000538828	TBX1	O43435	398 aa		10.33	□□□□□ -0.76
CLTCL1-205	ENST00000538828	HLA-DPB1	P04440	258 aa		10.33	□□□□□ -0.76
CLTCL1-205	ENST00000538828	ALPL	P05186	524 aa		10.33	□□□□□ -0.76
CLTCL1-205	ENST00000538828	WNT2	P09544	360 aa		10.33	□□□□□ -0.76

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