RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 PISDQ9UG56 409 aa5.97□□□□□ -1.45
USP28-207ENST00000538475 TAC3Q9UHF0 121 aa5.97□□□□□ -1.45
USP28-207ENST00000538475 CD84Q9UIB8 345 aa5.97□□□□□ -1.45
USP28-207ENST00000538475 VAX2Q9UIW0 290 aa5.97□□□□□ -1.45
USP28-207ENST00000538475 TUBD1Q9UJT1 453 aa5.97□□□□□ -1.45
USP28-207ENST00000538475 FBXO4Q9UKT5 387 aa5.97□□□□□ -1.45
USP28-207ENST00000538475 NTNG1Q9Y2I2 539 aa5.97□□□□□ -1.45
USP28-207ENST00000538475 PIAS3Q9Y6X2 628 aa5.97□□□□□ -1.45
USP28-207ENST00000538475 TRBV24-1A0A075B6N3 115 aa5.96□□□□□ -1.46
USP28-207ENST00000538475 C13orf42A0A1B0GVH6 325 aa5.96□□□□□ -1.46
USP28-207ENST00000538475 A0A1W2PPV9 198 aa5.96□□□□□ -1.46
USP28-207ENST00000538475 C9JQL5 133 aa5.96□□□□□ -1.46
USP28-207ENST00000538475 E5RGE8 158 aa5.96□□□□□ -1.46
USP28-207ENST00000538475 PPP5D1E7EU14 171 aa5.96□□□□□ -1.46
USP28-207ENST00000538475 K7EPK0 472 aa5.96□□□□□ -1.46
USP28-207ENST00000538475 M0QYG6 137 aa5.96□□□□□ -1.46
USP28-207ENST00000538475 M0R143 59 aa5.96□□□□□ -1.46
USP28-207ENST00000538475 CCSO14618 274 aa5.96□□□□□ -1.46
USP28-207ENST00000538475 HIST1H2BKO60814 126 aa5.96□□□□□ -1.46
USP28-207ENST00000538475 ALOX12BO75342 701 aa5.96□□□□□ -1.46
USP28-207ENST00000538475 ZNF217O75362 1048 aa5.96□□□□□ -1.46
USP28-207ENST00000538475 YIF1AO95070 293 aa5.96□□□□□ -1.46
USP28-207ENST00000538475 RENP00797 406 aa5.96□□□□□ -1.46
USP28-207ENST00000538475 HBE1P02100 147 aa5.96□□□□□ -1.46
USP28-207ENST00000538475 MAS1P04201 325 aa5.96□□□□□ -1.46
USP28-207ENST00000538475 HSPB1P04792 205 aaKnown RBP5.96□□□□□ -1.46
USP28-207ENST00000538475 ISG15P05161 165 aa5.96□□□□□ -1.46
USP28-207ENST00000538475 GYPBP06028 91 aa5.96□□□□□ -1.46
USP28-207ENST00000538475 HIST1H2BJP06899 126 aa5.96□□□□□ -1.46
USP28-207ENST00000538475 ELFN1P0C7U0 828 aa5.96□□□□□ -1.46
USP28-207ENST00000538475 IRF1P10914 325 aa5.96□□□□□ -1.46
USP28-207ENST00000538475 PNMTP11086 282 aa5.96□□□□□ -1.46
USP28-207ENST00000538475 FUT1P19526 365 aa5.96□□□□□ -1.46
USP28-207ENST00000538475 ZNF10P21506 573 aaPredicted RBP5.96□□□□□ -1.46
USP28-207ENST00000538475 HIST1H2BOP23527 126 aa5.96□□□□□ -1.46
USP28-207ENST00000538475 HSD11B1P28845 292 aa5.96□□□□□ -1.46
USP28-207ENST00000538475 RPL12P30050 165 aaKnown RBP5.96□□□□□ -1.46
USP28-207ENST00000538475 CCKARP32238 428 aa5.96□□□□□ -1.46
USP28-207ENST00000538475 HIST1H2BBP33778 126 aa5.96□□□□□ -1.46
USP28-207ENST00000538475 RPL4P36578 427 aaKnown RBP5.96□□□□□ -1.46
USP28-207ENST00000538475 THPOP40225 353 aa5.96□□□□□ -1.46
USP28-207ENST00000538475 P2RY1P47900 373 aa5.96□□□□□ -1.46
USP28-207ENST00000538475 EFNB2P52799 333 aa5.96□□□□□ -1.46
USP28-207ENST00000538475 HIST1H2BDP58876 126 aa5.96□□□□□ -1.46
USP28-207ENST00000538475 HIST1H2BCP62807 126 aa5.96□□□□□ -1.46
USP28-207ENST00000538475 TLE2Q04725 743 aa5.96□□□□□ -1.46
USP28-207ENST00000538475 SPOCK1Q08629 439 aa5.96□□□□□ -1.46
USP28-207ENST00000538475 PRDX4Q13162 271 aa5.96□□□□□ -1.46
USP28-207ENST00000538475 OR8G1Q15617 311 aa5.96□□□□□ -1.46
USP28-207ENST00000538475 HIST2H2BEQ16778 126 aa5.96□□□□□ -1.46
USP28-207ENST00000538475 KRTAP19-4Q3LI73 84 aa5.96□□□□□ -1.46
USP28-207ENST00000538475 KHDC3LQ587J8 217 aa5.96□□□□□ -1.46
USP28-207ENST00000538475 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.96□□□□□ -1.46
USP28-207ENST00000538475 DCST2Q5T1A1 773 aa5.96□□□□□ -1.46
USP28-207ENST00000538475 STPG1Q5TH74 334 aa5.96□□□□□ -1.46
USP28-207ENST00000538475 YOD1Q5VVQ6 348 aaPredicted RBP5.96□□□□□ -1.46
USP28-207ENST00000538475 TMEM225Q6GV28 225 aa5.96□□□□□ -1.46
USP28-207ENST00000538475 CLEC9AQ6UXN8 241 aa5.96□□□□□ -1.46
USP28-207ENST00000538475 DLK2Q6UY11 383 aa5.96□□□□□ -1.46
USP28-207ENST00000538475 ZNF793Q6ZN11 406 aa5.96□□□□□ -1.46
USP28-207ENST00000538475 MTSS1LQ765P7 747 aa5.96□□□□□ -1.46
USP28-207ENST00000538475 KCTD9Q7L273 389 aa5.96□□□□□ -1.46
USP28-207ENST00000538475 ZNF627Q7L945 461 aa5.96□□□□□ -1.46
USP28-207ENST00000538475 GKN2Q86XP6 184 aa5.96□□□□□ -1.46
USP28-207ENST00000538475 TGIF2LXQ8IUE1 241 aa5.96□□□□□ -1.46
USP28-207ENST00000538475 TMEM183AQ8IXX5 376 aa5.96□□□□□ -1.46
USP28-207ENST00000538475 RFLNBQ8N5W9 214 aa5.96□□□□□ -1.46
USP28-207ENST00000538475 ZNF614Q8N883 585 aa5.96□□□□□ -1.46
USP28-207ENST00000538475 MFSD9Q8NBP5 474 aa5.96□□□□□ -1.46
USP28-207ENST00000538475 SLC16A11Q8NCK7 471 aa5.96□□□□□ -1.46
USP28-207ENST00000538475 OR10AD1Q8NGE0 317 aa5.96□□□□□ -1.46
USP28-207ENST00000538475 OR2A12Q8NGT7 310 aa5.96□□□□□ -1.46
USP28-207ENST00000538475 OR2L8Q8NGY9 312 aa5.96□□□□□ -1.46
USP28-207ENST00000538475 TSEN15Q8WW01 171 aaKnown RBP5.96□□□□□ -1.46
USP28-207ENST00000538475 EMG1Q92979 244 aaKnown RBP5.96□□□□□ -1.46
USP28-207ENST00000538475 HIST1H2BHQ93079 126 aa5.96□□□□□ -1.46
USP28-207ENST00000538475 TVP23CQ96ET8 276 aa5.96□□□□□ -1.46
USP28-207ENST00000538475 ACY3Q96HD9 319 aa5.96□□□□□ -1.46
USP28-207ENST00000538475 BTF3L4Q96K17 158 aa5.96□□□□□ -1.46
USP28-207ENST00000538475 ADGRG7Q96K78 797 aa5.96□□□□□ -1.46
USP28-207ENST00000538475 Q96M85 177 aa5.96□□□□□ -1.46
USP28-207ENST00000538475 WDR92Q96MX6 357 aa5.96□□□□□ -1.46
USP28-207ENST00000538475 OR8B4Q96RC9 309 aa5.96□□□□□ -1.46
USP28-207ENST00000538475 HIST1H2BNQ99877 126 aa5.96□□□□□ -1.46
USP28-207ENST00000538475 HIST1H2BMQ99879 126 aa5.96□□□□□ -1.46
USP28-207ENST00000538475 ANGPTL4Q9BY76 406 aa5.96□□□□□ -1.46
USP28-207ENST00000538475 EIF5A2Q9GZV4 153 aaKnown RBP5.96□□□□□ -1.46
USP28-207ENST00000538475 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.96□□□□□ -1.46
USP28-207ENST00000538475 C1orf123Q9NWV4 160 aa5.96□□□□□ -1.46
USP28-207ENST00000538475 VSX1Q9NZR4 365 aaPredicted RBP5.96□□□□□ -1.46
USP28-207ENST00000538475 LRFN1Q9P244 771 aa5.96□□□□□ -1.46
USP28-207ENST00000538475 KIAA1456Q9P272 454 aa5.96□□□□□ -1.46
USP28-207ENST00000538475 C5AR2Q9P296 337 aa5.96□□□□□ -1.46
USP28-207ENST00000538475 PRODH2Q9UF12 536 aa5.96□□□□□ -1.46
USP28-207ENST00000538475 LAMP5Q9UJQ1 280 aa5.96□□□□□ -1.46
USP28-207ENST00000538475 KLK13Q9UKR3 277 aa5.96□□□□□ -1.46
USP28-207ENST00000538475 DHDHQ9UQ10 334 aa5.96□□□□□ -1.46
USP28-207ENST00000538475 FARSAQ9Y285 508 aaKnown RBP5.96□□□□□ -1.46
USP28-207ENST00000538475 AMDHD2Q9Y303 409 aa5.96□□□□□ -1.46
USP28-207ENST00000538475 NSG2Q9Y328 171 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms