RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 HCRTR2O43614 444 aa9.77□□□□□ -0.84
CLSTN3-207ENST00000537408 MAS1P04201 325 aa9.77□□□□□ -0.84
CLSTN3-207ENST00000537408 MMP7P09237 267 aaPredicted RBP9.77□□□□□ -0.84
CLSTN3-207ENST00000537408 ZNF705DP0CH99 300 aaPredicted RBP9.77□□□□□ -0.84
CLSTN3-207ENST00000537408 ZNF705BP0CI00 300 aaPredicted RBP9.77□□□□□ -0.84
CLSTN3-207ENST00000537408 SOX2P48431 317 aa9.77□□□□□ -0.84
CLSTN3-207ENST00000537408 RANP62826 216 aaKnown RBP9.77□□□□□ -0.84
CLSTN3-207ENST00000537408 Q499Y3 187 aa9.77□□□□□ -0.84
CLSTN3-207ENST00000537408 OR2L2Q8NH16 312 aa9.77□□□□□ -0.84
CLSTN3-207ENST00000537408 ZNF417Q8TAU3 575 aa9.77□□□□□ -0.84
CLSTN3-207ENST00000537408 TVP23CQ96ET8 276 aa9.77□□□□□ -0.84
CLSTN3-207ENST00000537408 ELOVL1Q9BW60 279 aa9.77□□□□□ -0.84
CLSTN3-207ENST00000537408 HCAR1Q9BXC0 346 aa9.77□□□□□ -0.84
CLSTN3-207ENST00000537408 DPH1Q9BZG8 443 aa9.77□□□□□ -0.84
CLSTN3-207ENST00000537408 TCFL5Q9UL49 500 aa9.77□□□□□ -0.84
CLSTN3-207ENST00000537408 ZFP30Q9Y2G7 519 aa9.77□□□□□ -0.84
CLSTN3-207ENST00000537408 SPTBN2O15020 2390 aa9.77□□□□□ -0.85
CLSTN3-207ENST00000537408 PPP5D1E7EU14 171 aa9.77□□□□□ -0.85
CLSTN3-207ENST00000537408 GEMIN2O14893 280 aaKnown RBP9.77□□□□□ -0.85
CLSTN3-207ENST00000537408 IL33O95760 270 aa9.77□□□□□ -0.85
CLSTN3-207ENST00000537408 AGR2O95994 175 aa9.77□□□□□ -0.85
CLSTN3-207ENST00000537408 CSTBP04080 98 aaKnown RBP9.77□□□□□ -0.85
CLSTN3-207ENST00000537408 TACSTD2P09758 323 aa9.77□□□□□ -0.85
CLSTN3-207ENST00000537408 RAB11BQ15907 218 aa9.77□□□□□ -0.85
CLSTN3-207ENST00000537408 ATP6V1FQ16864 119 aa9.77□□□□□ -0.85
CLSTN3-207ENST00000537408 PLEKHS1Q5SXH7 462 aa9.77□□□□□ -0.85
CLSTN3-207ENST00000537408 C5orf24Q7Z6I8 188 aa9.77□□□□□ -0.85
CLSTN3-207ENST00000537408 ADIPOR2Q86V24 386 aa9.77□□□□□ -0.85
CLSTN3-207ENST00000537408 ZNF679Q8IYX0 411 aa9.77□□□□□ -0.85
CLSTN3-207ENST00000537408 OR1P1Q8NH06 330 aa9.77□□□□□ -0.85
CLSTN3-207ENST00000537408 GPR148Q8TDV2 347 aa9.77□□□□□ -0.85
CLSTN3-207ENST00000537408 GPX8Q8TED1 209 aa9.77□□□□□ -0.85
CLSTN3-207ENST00000537408 MRGPRX3Q96LB0 322 aa9.77□□□□□ -0.85
CLSTN3-207ENST00000537408 DIRC2Q96SL1 478 aa9.77□□□□□ -0.85
CLSTN3-207ENST00000537408 OR11A1Q9GZK7 315 aa9.77□□□□□ -0.85
CLSTN3-207ENST00000537408 SLC5A7Q9GZV3 580 aa9.77□□□□□ -0.85
CLSTN3-207ENST00000537408 WSB2Q9NYS7 404 aaPredicted RBP9.77□□□□□ -0.85
CLSTN3-207ENST00000537408 TAAR2Q9P1P5 351 aa9.77□□□□□ -0.85
CLSTN3-207ENST00000537408 ZNF780BQ9Y6R6 833 aa9.77□□□□□ -0.85
CLSTN3-207ENST00000537408 CA11O75493 328 aa9.77□□□□□ -0.85
CLSTN3-207ENST00000537408 IL2RAP01589 272 aa9.77□□□□□ -0.85
CLSTN3-207ENST00000537408 CXCL1P09341 107 aa9.77□□□□□ -0.85
CLSTN3-207ENST00000537408 ALDH3B1P43353 468 aa9.77□□□□□ -0.85
CLSTN3-207ENST00000537408 POLR2HP52434 150 aaKnown RBP9.77□□□□□ -0.85
CLSTN3-207ENST00000537408 KLF3P57682 345 aaPredicted RBP9.77□□□□□ -0.85
CLSTN3-207ENST00000537408 EIF2B1Q14232 305 aaKnown RBP9.77□□□□□ -0.85
CLSTN3-207ENST00000537408 ZNF683Q8IZ20 524 aa9.77□□□□□ -0.85
CLSTN3-207ENST00000537408 TM4SF18Q96CE8 201 aa9.77□□□□□ -0.85
CLSTN3-207ENST00000537408 PRAP1Q96NZ9 151 aa9.77□□□□□ -0.85
CLSTN3-207ENST00000537408 G6PC3Q9BUM1 346 aa9.77□□□□□ -0.85
CLSTN3-207ENST00000537408 SGPP1Q9BX95 441 aa9.77□□□□□ -0.85
CLSTN3-207ENST00000537408 TRIM2Q9C040 744 aa9.77□□□□□ -0.85
CLSTN3-207ENST00000537408 CST11Q9H112 138 aa9.77□□□□□ -0.85
CLSTN3-207ENST00000537408 PLEKHA2Q9HB19 425 aa9.77□□□□□ -0.85
CLSTN3-207ENST00000537408 ZNF107Q9UII5 783 aaPredicted RBP9.77□□□□□ -0.85
CLSTN3-207ENST00000537408 CLEC4EQ9ULY5 219 aa9.77□□□□□ -0.85
CLSTN3-207ENST00000537408 A0A0G2JN53 185 aa9.76□□□□□ -0.85
CLSTN3-207ENST00000537408 H3BQ15 152 aa9.76□□□□□ -0.85
CLSTN3-207ENST00000537408 CBR3O75828 277 aa9.76□□□□□ -0.85
CLSTN3-207ENST00000537408 AMBPP02760 352 aa9.76□□□□□ -0.85
CLSTN3-207ENST00000537408 F13BP05160 661 aa9.76□□□□□ -0.85
CLSTN3-207ENST00000537408 NAA10P41227 235 aaPredicted RBP9.76□□□□□ -0.85
CLSTN3-207ENST00000537408 SLC35A1P78382 337 aa9.76□□□□□ -0.85
CLSTN3-207ENST00000537408 PRAMEF14Q5SWL7 426 aa9.76□□□□□ -0.85
CLSTN3-207ENST00000537408 C1orf194Q5T5A4 169 aa9.76□□□□□ -0.85
CLSTN3-207ENST00000537408 ZNF343Q6P1L6 599 aa9.76□□□□□ -0.85
CLSTN3-207ENST00000537408 RELTQ969Z4 430 aa9.76□□□□□ -0.85
CLSTN3-207ENST00000537408 PARP12Q9H0J9 701 aaKnown RBP9.76□□□□□ -0.85
CLSTN3-207ENST00000537408 BCL2L10Q9HD36 194 aa9.76□□□□□ -0.85
CLSTN3-207ENST00000537408 ZCCHC3Q9NUD5 404 aaKnown RBP9.76□□□□□ -0.85
CLSTN3-207ENST00000537408 HAO2Q9NYQ3 351 aa9.76□□□□□ -0.85
CLSTN3-207ENST00000537408 HEBP2Q9Y5Z4 205 aa9.76□□□□□ -0.85
CLSTN3-207ENST00000537408 LCTP09848 1927 aa9.76□□□□□ -0.85
CLSTN3-207ENST00000537408 FRKP42685 505 aaPredicted RBP9.76□□□□□ -0.85
CLSTN3-207ENST00000537408 FAM3AP98173 230 aa9.76□□□□□ -0.85
CLSTN3-207ENST00000537408 C1orf61Q13536 156 aa9.76□□□□□ -0.85
CLSTN3-207ENST00000537408 TMPPEQ6ZT21 453 aa9.76□□□□□ -0.85
CLSTN3-207ENST00000537408 GCNT2Q8N0V5 402 aa9.76□□□□□ -0.85
CLSTN3-207ENST00000537408 AMER3Q8N944 861 aa9.76□□□□□ -0.85
CLSTN3-207ENST00000537408 KISS1RQ969F8 398 aaPredicted RBP9.76□□□□□ -0.85
CLSTN3-207ENST00000537408 SEH1LQ96EE3 360 aa9.76□□□□□ -0.85
CLSTN3-207ENST00000537408 YPEL4Q96NS1 127 aa9.76□□□□□ -0.85
CLSTN3-207ENST00000537408 GFI1Q99684 422 aa9.76□□□□□ -0.85
CLSTN3-207ENST00000537408 DMRT3Q9NQL9 472 aa9.76□□□□□ -0.85
CLSTN3-207ENST00000537408 SLC17A5Q9NRA2 495 aa9.76□□□□□ -0.85
CLSTN3-207ENST00000537408 CUTCQ9NTM9 273 aa9.76□□□□□ -0.85
CLSTN3-207ENST00000537408 SEMA5BQ9P283 1151 aa9.76□□□□□ -0.85
CLSTN3-207ENST00000537408 GRHPRQ9UBQ7 328 aa9.76□□□□□ -0.85
CLSTN3-207ENST00000537408 ZNF346Q9UL40 294 aaKnown RBP9.76□□□□□ -0.85
CLSTN3-207ENST00000537408 WDR45Q9Y484 360 aa9.76□□□□□ -0.85
CLSTN3-207ENST00000537408 GAPDHP04406 335 aaKnown RBP9.76□□□□□ -0.85
CLSTN3-207ENST00000537408 ZNF28P17035 718 aa9.76□□□□□ -0.85
CLSTN3-207ENST00000537408 CMPK1P30085 196 aa9.76□□□□□ -0.85
CLSTN3-207ENST00000537408 GALNSP34059 522 aa9.76□□□□□ -0.85
CLSTN3-207ENST00000537408 CSNK1DP48730 415 aa9.76□□□□□ -0.85
CLSTN3-207ENST00000537408 NR0B2Q15466 257 aa9.76□□□□□ -0.85
CLSTN3-207ENST00000537408 PARS2Q7L3T8 475 aaKnown RBP9.76□□□□□ -0.85
CLSTN3-207ENST00000537408 RNASE8Q8TDE3 154 aaKnown RBP9.76□□□□□ -0.85
CLSTN3-207ENST00000537408 THRSPQ92748 146 aa9.76□□□□□ -0.85
CLSTN3-207ENST00000537408 DIO2Q92813 273 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms