RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 HES2Q9Y543 173 aa3.32□□□□□ -1.88
PRKDC-208ENST00000536710 COMMD3-BMI1R4GMX3 469 aa3.32□□□□□ -1.88
PRKDC-208ENST00000536710 IGSF9BQ9UPX0 1349 aa3.32□□□□□ -1.88
PRKDC-208ENST00000536710 ZNFX1Q9P2E3 1918 aaKnown RBP3.32□□□□□ -1.88
PRKDC-208ENST00000536710 ARHGAP21Q5T5U3 1957 aa3.32□□□□□ -1.88
PRKDC-208ENST00000536710 NEURL4Q96JN8 1562 aa3.31□□□□□ -1.88
PRKDC-208ENST00000536710 A0A1B0GUH1 482 aa3.31□□□□□ -1.88
PRKDC-208ENST00000536710 ZNF705GA8MUZ8 300 aaPredicted RBP3.31□□□□□ -1.88
PRKDC-208ENST00000536710 BPY2O14599 106 aa3.31□□□□□ -1.88
PRKDC-208ENST00000536710 ZNF688P0C7X2 276 aa3.31□□□□□ -1.88
PRKDC-208ENST00000536710 GFAPP14136 432 aa3.31□□□□□ -1.88
PRKDC-208ENST00000536710 NPY1RP25929 384 aa3.31□□□□□ -1.88
PRKDC-208ENST00000536710 HTR1DP28221 377 aa3.31□□□□□ -1.88
PRKDC-208ENST00000536710 MYCNOSP40205 109 aa3.31□□□□□ -1.88
PRKDC-208ENST00000536710 CARD18P57730 90 aa3.31□□□□□ -1.88
PRKDC-208ENST00000536710 PAFAH1B2P68402 229 aa3.31□□□□□ -1.88
PRKDC-208ENST00000536710 CRADDP78560 199 aa3.31□□□□□ -1.88
PRKDC-208ENST00000536710 C16orf72Q14CZ0 275 aa3.31□□□□□ -1.88
PRKDC-208ENST00000536710 RTL4Q6ZR62 310 aa3.31□□□□□ -1.88
PRKDC-208ENST00000536710 OR51L1Q8NGJ5 315 aa3.31□□□□□ -1.88
PRKDC-208ENST00000536710 OR1J4Q8NGS1 313 aa3.31□□□□□ -1.88
PRKDC-208ENST00000536710 OR6N1Q8NGY5 312 aa3.31□□□□□ -1.88
PRKDC-208ENST00000536710 OR52P1PQ8NH57 321 aa3.31□□□□□ -1.88
PRKDC-208ENST00000536710 AGMATQ9BSE5 352 aa3.31□□□□□ -1.88
PRKDC-208ENST00000536710 TMEM243Q9BU79 118 aa3.31□□□□□ -1.88
PRKDC-208ENST00000536710 REEP1Q9H902 201 aa3.31□□□□□ -1.88
PRKDC-208ENST00000536710 KIF27Q86VH2 1401 aa3.3□□□□□ -1.88
PRKDC-208ENST00000536710 IGLV4-60A0A075B6I1 120 aa3.3□□□□□ -1.88
PRKDC-208ENST00000536710 IGKV2-28A0A075B6P5 120 aa3.3□□□□□ -1.88
PRKDC-208ENST00000536710 C5orf63A6NC05 138 aa3.3□□□□□ -1.88
PRKDC-208ENST00000536710 GOLGA8JA6NMD2 632 aa3.3□□□□□ -1.88
PRKDC-208ENST00000536710 KRTAP9-6A8MVA2 160 aa3.3□□□□□ -1.88
PRKDC-208ENST00000536710 KRBOX1C9JBD0 128 aa3.3□□□□□ -1.88
PRKDC-208ENST00000536710 RAD1O60671 282 aa3.3□□□□□ -1.88
PRKDC-208ENST00000536710 IGKV2D-28P01615 120 aa3.3□□□□□ -1.88
PRKDC-208ENST00000536710 HLA-DQA1P01909 254 aa3.3□□□□□ -1.88
PRKDC-208ENST00000536710 KLK1P06870 262 aa3.3□□□□□ -1.88
PRKDC-208ENST00000536710 CRYGCP07315 174 aa3.3□□□□□ -1.88
PRKDC-208ENST00000536710 TACSTD2P09758 323 aa3.3□□□□□ -1.88
PRKDC-208ENST00000536710 CISD3P0C7P0 127 aa3.3□□□□□ -1.88
PRKDC-208ENST00000536710 GOLGA8HP0CJ92 632 aa3.3□□□□□ -1.88
PRKDC-208ENST00000536710 HOXB8P17481 243 aaPredicted RBP3.3□□□□□ -1.88
PRKDC-208ENST00000536710 CD70P32970 193 aa3.3□□□□□ -1.88
PRKDC-208ENST00000536710 NUP62P37198 522 aaPredicted RBP3.3□□□□□ -1.88
PRKDC-208ENST00000536710 GFERP55789 205 aa3.3□□□□□ -1.88
PRKDC-208ENST00000536710 TAS2R31P59538 309 aa3.3□□□□□ -1.88
PRKDC-208ENST00000536710 NKAIN1Q4KMZ8 207 aa3.3□□□□□ -1.88
PRKDC-208ENST00000536710 LINC00336Q6ZUF6 198 aa3.3□□□□□ -1.88
PRKDC-208ENST00000536710 SLC16A13Q7RTY0 426 aa3.3□□□□□ -1.88
PRKDC-208ENST00000536710 SLC30A8Q8IWU4 369 aa3.3□□□□□ -1.88
PRKDC-208ENST00000536710 TMEM256Q8N2U0 113 aa3.3□□□□□ -1.88
PRKDC-208ENST00000536710 ARHGAP18Q8N392 663 aa3.3□□□□□ -1.88
PRKDC-208ENST00000536710 WDR31Q8NA23 367 aa3.3□□□□□ -1.88
PRKDC-208ENST00000536710 OR4A15Q8NGL6 344 aa3.3□□□□□ -1.88
PRKDC-208ENST00000536710 L3HYPDHQ96EM0 354 aa3.3□□□□□ -1.88
PRKDC-208ENST00000536710 RBBP8Q99708 897 aa3.3□□□□□ -1.88
PRKDC-208ENST00000536710 RSG1Q9BU20 258 aa3.3□□□□□ -1.88
PRKDC-208ENST00000536710 GGTLC1Q9BX51 225 aa3.3□□□□□ -1.88
PRKDC-208ENST00000536710 ARMC7Q9H6L4 198 aa3.3□□□□□ -1.88
PRKDC-208ENST00000536710 LZTFL1Q9NQ48 299 aa3.3□□□□□ -1.88
PRKDC-208ENST00000536710 FBXO8Q9NRD0 319 aa3.3□□□□□ -1.88
PRKDC-208ENST00000536710 DENND4AQ7Z401 1863 aa3.3□□□□□ -1.88
PRKDC-208ENST00000536710 A0A1W2PRF3 423 aa3.29□□□□□ -1.88
PRKDC-208ENST00000536710 A0A1W2PRM7 423 aa3.29□□□□□ -1.88
PRKDC-208ENST00000536710 ETHE1O95571 254 aa3.29□□□□□ -1.88
PRKDC-208ENST00000536710 CSTAP01040 98 aa3.29□□□□□ -1.88
PRKDC-208ENST00000536710 C1GALT1C1LP0DN25 315 aa3.29□□□□□ -1.88
PRKDC-208ENST00000536710 PTNP21246 168 aa3.29□□□□□ -1.88
PRKDC-208ENST00000536710 CPN2P22792 545 aa3.29□□□□□ -1.88
PRKDC-208ENST00000536710 PPIDQ08752 370 aaKnown RBP3.29□□□□□ -1.88
PRKDC-208ENST00000536710 PIGHQ14442 188 aaPredicted RBP3.29□□□□□ -1.88
PRKDC-208ENST00000536710 ZFP1Q6P2D0 407 aa3.29□□□□□ -1.88
PRKDC-208ENST00000536710 SLC35D2Q76EJ3 337 aa3.29□□□□□ -1.88
PRKDC-208ENST00000536710 OR2W3Q7Z3T1 314 aa3.29□□□□□ -1.88
PRKDC-208ENST00000536710 MDP1Q86V88 176 aa3.29□□□□□ -1.88
PRKDC-208ENST00000536710 UBALD2Q8IYN6 164 aa3.29□□□□□ -1.88
PRKDC-208ENST00000536710 C19orf18Q8NEA5 215 aa3.29□□□□□ -1.88
PRKDC-208ENST00000536710 LILRB4Q8NHJ6 448 aa3.29□□□□□ -1.88
PRKDC-208ENST00000536710 RXFP4Q8TDU9 374 aa3.29□□□□□ -1.88
PRKDC-208ENST00000536710 BAALCQ8WXS3 180 aa3.29□□□□□ -1.88
PRKDC-208ENST00000536710 GAL3ST2Q9H3Q3 398 aa3.29□□□□□ -1.88
PRKDC-208ENST00000536710 TNIKQ9UKE5 1360 aa3.28□□□□□ -1.88
PRKDC-208ENST00000536710 PIKFYVEQ9Y2I7 2098 aa3.28□□□□□ -1.88
PRKDC-208ENST00000536710 H0YJW9 148 aa3.28□□□□□ -1.88
PRKDC-208ENST00000536710 TNFRSF11BO00300 401 aa3.28□□□□□ -1.88
PRKDC-208ENST00000536710 BET1O15155 118 aa3.28□□□□□ -1.88
PRKDC-208ENST00000536710 EIF1BO60739 113 aaKnown RBP3.28□□□□□ -1.88
PRKDC-208ENST00000536710 SERPINB7O75635 380 aa3.28□□□□□ -1.88
PRKDC-208ENST00000536710 LCA5LO95447 670 aa3.28□□□□□ -1.88
PRKDC-208ENST00000536710 SNAI1O95863 264 aaPredicted RBP3.28□□□□□ -1.88
PRKDC-208ENST00000536710 PTHP01270 115 aa3.28□□□□□ -1.88
PRKDC-208ENST00000536710 ARL2P36404 184 aa3.28□□□□□ -1.88
PRKDC-208ENST00000536710 OPRK1P41145 380 aa3.28□□□□□ -1.88
PRKDC-208ENST00000536710 EIF1P41567 113 aaKnown RBP3.28□□□□□ -1.88
PRKDC-208ENST00000536710 OR2B8PP59922 312 aa3.28□□□□□ -1.88
PRKDC-208ENST00000536710 IFITM3Q01628 133 aa3.28□□□□□ -1.88
PRKDC-208ENST00000536710 EIF4EBP2Q13542 120 aaPredicted RBP3.28□□□□□ -1.88
PRKDC-208ENST00000536710 HNRNPA1L2Q32P51 320 aaKnown RBP3.28□□□□□ -1.88
PRKDC-208ENST00000536710 ABCA11PQ4W5N1 156 aa3.28□□□□□ -1.88
PRKDC-208ENST00000536710 AP1ARQ63HQ0 302 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms