RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 CRISP1P54107 249 aa10.46□□□□□ -0.73
PRKDC-207ENST00000536483 ESRRGP62508 458 aa10.46□□□□□ -0.73
PRKDC-207ENST00000536483 GRB2P62993 217 aaKnown RBP10.46□□□□□ -0.73
PRKDC-207ENST00000536483 PGAP1Q75T13 922 aa10.46□□□□□ -0.73
PRKDC-207ENST00000536483 KLBQ86Z14 1044 aa10.46□□□□□ -0.73
PRKDC-207ENST00000536483 PQLC1Q8N2U9 271 aa10.46□□□□□ -0.73
PRKDC-207ENST00000536483 ZNF454Q8N9F8 522 aa10.46□□□□□ -0.73
PRKDC-207ENST00000536483 Q8TCH9 128 aa10.46□□□□□ -0.73
PRKDC-207ENST00000536483 ITLN1Q8WWA0 313 aa10.46□□□□□ -0.73
PRKDC-207ENST00000536483 ITFG2Q969R8 447 aa10.46□□□□□ -0.73
PRKDC-207ENST00000536483 MEGF10Q96KG7 1140 aa10.46□□□□□ -0.73
PRKDC-207ENST00000536483 OR2V2Q96R30 315 aa10.46□□□□□ -0.73
PRKDC-207ENST00000536483 NR1H4Q96RI1 486 aaPredicted RBP10.46□□□□□ -0.73
PRKDC-207ENST00000536483 INTS14Q96SY0 518 aa10.46□□□□□ -0.73
PRKDC-207ENST00000536483 SP140LQ9H930 580 aa10.46□□□□□ -0.73
PRKDC-207ENST00000536483 C8orf4Q9NR00 106 aa10.46□□□□□ -0.73
PRKDC-207ENST00000536483 TMEM100Q9NV29 134 aa10.46□□□□□ -0.73
PRKDC-207ENST00000536483 OPN4Q9UHM6 478 aa10.46□□□□□ -0.73
PRKDC-207ENST00000536483 PPP1R3CQ9UQK1 317 aa10.46□□□□□ -0.73
PRKDC-207ENST00000536483 NOP16Q9Y3C1 178 aaKnown RBP10.46□□□□□ -0.73
PRKDC-207ENST00000536483 FAM183AA6NL82 134 aa10.45□□□□□ -0.74
PRKDC-207ENST00000536483 CD300LBA8K4G0 201 aa10.45□□□□□ -0.74
PRKDC-207ENST00000536483 PRR23D1E9PI22 279 aaPredicted RBP10.45□□□□□ -0.74
PRKDC-207ENST00000536483 TMEM178BH3BS89 294 aa10.45□□□□□ -0.74
PRKDC-207ENST00000536483 TIPRLO75663 272 aa10.45□□□□□ -0.74
PRKDC-207ENST00000536483 SPARCP09486 303 aa10.45□□□□□ -0.74
PRKDC-207ENST00000536483 PRR23D2P0DMB1 279 aaPredicted RBP10.45□□□□□ -0.74
PRKDC-207ENST00000536483 GATA3P23771 443 aa10.45□□□□□ -0.74
PRKDC-207ENST00000536483 OPRL1P41146 370 aa10.45□□□□□ -0.74
PRKDC-207ENST00000536483 CD200P41217 278 aa10.45□□□□□ -0.74
PRKDC-207ENST00000536483 HSPA13P48723 471 aa10.45□□□□□ -0.74
PRKDC-207ENST00000536483 SRP9P49458 86 aaKnown RBP10.45□□□□□ -0.74
PRKDC-207ENST00000536483 RAD23AP54725 363 aa10.45□□□□□ -0.74
PRKDC-207ENST00000536483 UBA52P62987 128 aaKnown RBP10.45□□□□□ -0.74
PRKDC-207ENST00000536483 LCN2P80188 198 aa10.45□□□□□ -0.74
PRKDC-207ENST00000536483 ZNF92Q03936 586 aa10.45□□□□□ -0.74
PRKDC-207ENST00000536483 MAB21L1Q13394 359 aa10.45□□□□□ -0.74
PRKDC-207ENST00000536483 SNAI3Q3KNW1 292 aa10.45□□□□□ -0.74
PRKDC-207ENST00000536483 KDM4DQ6B0I6 523 aa10.45□□□□□ -0.74
PRKDC-207ENST00000536483 KRT74Q7RTS7 529 aa10.45□□□□□ -0.74
PRKDC-207ENST00000536483 DPY19L4Q7Z388 723 aa10.45□□□□□ -0.74
PRKDC-207ENST00000536483 ATG16L2Q8NAA4 619 aa10.45□□□□□ -0.74
PRKDC-207ENST00000536483 OR6K6Q8NGW6 343 aa10.45□□□□□ -0.74
PRKDC-207ENST00000536483 OTOSQ8NHW6 89 aa10.45□□□□□ -0.74
PRKDC-207ENST00000536483 GAL3ST1Q99999 423 aa10.45□□□□□ -0.74
PRKDC-207ENST00000536483 ABHD6Q9BV23 337 aa10.45□□□□□ -0.74
PRKDC-207ENST00000536483 TEX12Q9BXU0 123 aa10.45□□□□□ -0.74
PRKDC-207ENST00000536483 GABARAPL1Q9H0R8 117 aa10.45□□□□□ -0.74
PRKDC-207ENST00000536483 VCXQ9H320 206 aa10.45□□□□□ -0.74
PRKDC-207ENST00000536483 MED20Q9H944 212 aa10.45□□□□□ -0.74
PRKDC-207ENST00000536483 PAPOLBQ9NRJ5 636 aaKnown RBP10.45□□□□□ -0.74
PRKDC-207ENST00000536483 MRPL15Q9P015 296 aaKnown RBP10.45□□□□□ -0.74
PRKDC-207ENST00000536483 PPIAL4AQ9Y536 164 aa10.45□□□□□ -0.74
PRKDC-207ENST00000536483 AP4S1Q9Y587 144 aa10.45□□□□□ -0.74
PRKDC-207ENST00000536483 ISPDA4D126 451 aa10.44□□□□□ -0.74
PRKDC-207ENST00000536483 F5H0A9 414 aaPredicted RBP10.44□□□□□ -0.74
PRKDC-207ENST00000536483 H3BNX3 289 aa10.44□□□□□ -0.74
PRKDC-207ENST00000536483 XRCC2O43543 280 aa10.44□□□□□ -0.74
PRKDC-207ENST00000536483 GMDSO60547 372 aa10.44□□□□□ -0.74
PRKDC-207ENST00000536483 FSHBP01225 129 aa10.44□□□□□ -0.74
PRKDC-207ENST00000536483 FCGR1AP12314 374 aa10.44□□□□□ -0.74
PRKDC-207ENST00000536483 ANOS1P23352 680 aa10.44□□□□□ -0.74
PRKDC-207ENST00000536483 FPR2P25090 351 aa10.44□□□□□ -0.74
PRKDC-207ENST00000536483 FASP25445 335 aa10.44□□□□□ -0.74
PRKDC-207ENST00000536483 POU1F1P28069 291 aa10.44□□□□□ -0.74
PRKDC-207ENST00000536483 MMP16P51512 607 aa10.44□□□□□ -0.74
PRKDC-207ENST00000536483 HNRNPA0Q13151 305 aaKnown RBP10.44□□□□□ -0.74
PRKDC-207ENST00000536483 PTGES3Q15185 160 aaKnown RBP10.44□□□□□ -0.74
PRKDC-207ENST00000536483 OGFRL1Q5TC84 451 aaPredicted RBP10.44□□□□□ -0.74
PRKDC-207ENST00000536483 PLBD1Q6P4A8 553 aa10.44□□□□□ -0.74
PRKDC-207ENST00000536483 CPOQ8IVL8 374 aa10.44□□□□□ -0.74
PRKDC-207ENST00000536483 OR5AS1Q8N127 324 aa10.44□□□□□ -0.74
PRKDC-207ENST00000536483 SPICQ8N5J4 248 aa10.44□□□□□ -0.74
PRKDC-207ENST00000536483 SPERTQ8NA61 448 aa10.44□□□□□ -0.74
PRKDC-207ENST00000536483 OR52H1Q8NGJ2 320 aa10.44□□□□□ -0.74
PRKDC-207ENST00000536483 NRG4Q8WWG1 115 aa10.44□□□□□ -0.74
PRKDC-207ENST00000536483 PYDC1Q8WXC3 89 aa10.44□□□□□ -0.74
PRKDC-207ENST00000536483 COPS4Q9BT78 406 aa10.44□□□□□ -0.74
PRKDC-207ENST00000536483 OSBPL10Q9BXB5 764 aa10.44□□□□□ -0.74
PRKDC-207ENST00000536483 Q9H521 79 aa10.44□□□□□ -0.74
PRKDC-207ENST00000536483 PATZ1Q9HBE1 687 aaKnown RBP10.44□□□□□ -0.74
PRKDC-207ENST00000536483 DCAF16Q9NXF7 216 aa10.44□□□□□ -0.74
PRKDC-207ENST00000536483 UBAP1Q9NZ09 502 aa10.44□□□□□ -0.74
PRKDC-207ENST00000536483 PCDHGB1Q9Y5G3 927 aa10.44□□□□□ -0.74
PRKDC-207ENST00000536483 TANC2Q9HCD6 1990 aa10.44□□□□□ -0.74
PRKDC-207ENST00000536483 C5orf63A6NC05 138 aa10.43□□□□□ -0.74
PRKDC-207ENST00000536483 A8MXK9 166 aa10.43□□□□□ -0.74
PRKDC-207ENST00000536483 G3V2T6 193 aa10.43□□□□□ -0.74
PRKDC-207ENST00000536483 H0YL77 283 aa10.43□□□□□ -0.74
PRKDC-207ENST00000536483 ALOX5APP20292 161 aa10.43□□□□□ -0.74
PRKDC-207ENST00000536483 CFL1P23528 166 aaKnown RBP10.43□□□□□ -0.74
PRKDC-207ENST00000536483 ZFP36P26651 326 aaKnown RBP10.43□□□□□ -0.74
PRKDC-207ENST00000536483 MDH2P40926 338 aaKnown RBP10.43□□□□□ -0.74
PRKDC-207ENST00000536483 PMELP40967 661 aa10.43□□□□□ -0.74
PRKDC-207ENST00000536483 SLC6A9P48067 706 aa10.43□□□□□ -0.74
PRKDC-207ENST00000536483 BTG1P62324 171 aa10.43□□□□□ -0.74
PRKDC-207ENST00000536483 EIF2B1Q14232 305 aaKnown RBP10.43□□□□□ -0.74
PRKDC-207ENST00000536483 ZMYND11Q15326 602 aa10.43□□□□□ -0.74
PRKDC-207ENST00000536483 GLYATL3Q5SZD4 288 aa10.43□□□□□ -0.74
PRKDC-207ENST00000536483 DEGS2Q6QHC5 323 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms