RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 MOB3CQ70IA8 216 aa14.18□□□□□ -0.14
CHMP1A-202ENST00000535997 OR5AS1Q8N127 324 aa14.18□□□□□ -0.14
CHMP1A-202ENST00000535997 TERB2Q8NHR7 220 aa14.18□□□□□ -0.14
CHMP1A-202ENST00000535997 THAP6Q8TBB0 222 aa14.18□□□□□ -0.14
CHMP1A-202ENST00000535997 SPSB2Q99619 263 aa14.18□□□□□ -0.14
CHMP1A-202ENST00000535997 CRB3Q9BUF7 120 aa14.18□□□□□ -0.14
CHMP1A-202ENST00000535997 DUSP23Q9BVJ7 150 aa14.18□□□□□ -0.14
CHMP1A-202ENST00000535997 GPR84Q9NQS5 396 aa14.18□□□□□ -0.14
CHMP1A-202ENST00000535997 C19orf25Q9UFG5 118 aaPredicted RBP14.18□□□□□ -0.14
CHMP1A-202ENST00000535997 GPR160Q9UJ42 338 aa14.18□□□□□ -0.14
CHMP1A-202ENST00000535997 MRPS28Q9Y2Q9 187 aaKnown RBP14.18□□□□□ -0.14
CHMP1A-202ENST00000535997 HDGFL3Q9Y3E1 203 aa14.18□□□□□ -0.14
CHMP1A-202ENST00000535997 CACNA1EQ15878 2313 aa14.18□□□□□ -0.14
CHMP1A-202ENST00000535997 ZNF726A6NNF4 738 aa14.18□□□□□ -0.14
CHMP1A-202ENST00000535997 CCSO14618 274 aa14.18□□□□□ -0.14
CHMP1A-202ENST00000535997 CCL1P22362 96 aa14.18□□□□□ -0.14
CHMP1A-202ENST00000535997 AVPR2P30518 371 aa14.18□□□□□ -0.14
CHMP1A-202ENST00000535997 STARP49675 285 aa14.18□□□□□ -0.14
CHMP1A-202ENST00000535997 ATP1B3P54709 279 aa14.18□□□□□ -0.14
CHMP1A-202ENST00000535997 INPP5JQ15735 1006 aaPredicted RBP14.18□□□□□ -0.14
CHMP1A-202ENST00000535997 LRRC37A5PQ49AS3 106 aa14.18□□□□□ -0.14
CHMP1A-202ENST00000535997 COMMD2Q86X83 199 aa14.18□□□□□ -0.14
CHMP1A-202ENST00000535997 HOGA1Q86XE5 327 aa14.18□□□□□ -0.14
CHMP1A-202ENST00000535997 RELL2Q8NC24 303 aaPredicted RBP14.18□□□□□ -0.14
CHMP1A-202ENST00000535997 OR8B12Q8NGG6 310 aa14.18□□□□□ -0.14
CHMP1A-202ENST00000535997 OR10K1Q8NGX5 313 aa14.18□□□□□ -0.14
CHMP1A-202ENST00000535997 LHFPL5Q8TAF8 219 aa14.18□□□□□ -0.14
CHMP1A-202ENST00000535997 RAB3CQ96E17 227 aa14.18□□□□□ -0.14
CHMP1A-202ENST00000535997 SPACA9Q96E40 222 aaPredicted RBP14.18□□□□□ -0.14
CHMP1A-202ENST00000535997 C1orf147Q96MC9 270 aaPredicted RBP14.18□□□□□ -0.14
CHMP1A-202ENST00000535997 WDR13Q9H1Z4 485 aa14.18□□□□□ -0.14
CHMP1A-202ENST00000535997 UBE2ZQ9H832 354 aaPredicted RBP14.18□□□□□ -0.14
CHMP1A-202ENST00000535997 RNF222A6NCQ9 220 aa14.17□□□□□ -0.14
CHMP1A-202ENST00000535997 DBX1A6NMT0 343 aa14.17□□□□□ -0.14
CHMP1A-202ENST00000535997 RER1O15258 196 aa14.17□□□□□ -0.14
CHMP1A-202ENST00000535997 TLX3O43711 291 aaPredicted RBP14.17□□□□□ -0.14
CHMP1A-202ENST00000535997 QDPRP09417 244 aa14.17□□□□□ -0.14
CHMP1A-202ENST00000535997 AKR1C4P17516 323 aa14.17□□□□□ -0.14
CHMP1A-202ENST00000535997 PRKACBP22694 351 aa14.17□□□□□ -0.14
CHMP1A-202ENST00000535997 VAMP1P23763 118 aa14.17□□□□□ -0.14
CHMP1A-202ENST00000535997 TAS2R31P59538 309 aa14.17□□□□□ -0.14
CHMP1A-202ENST00000535997 BTN1A1Q13410 526 aa14.17□□□□□ -0.14
CHMP1A-202ENST00000535997 DOK3Q7L591 496 aa14.17□□□□□ -0.14
CHMP1A-202ENST00000535997 NAA40Q86UY6 237 aa14.17□□□□□ -0.14
CHMP1A-202ENST00000535997 INO80EQ8NBZ0 244 aaPredicted RBP14.17□□□□□ -0.14
CHMP1A-202ENST00000535997 TMEM104Q8NE00 496 aa14.17□□□□□ -0.14
CHMP1A-202ENST00000535997 FBXW5Q969U6 566 aa14.17□□□□□ -0.14
CHMP1A-202ENST00000535997 NICN1Q9BSH3 213 aa14.17□□□□□ -0.14
CHMP1A-202ENST00000535997 DEFB126Q9BYW3 111 aa14.17□□□□□ -0.14
CHMP1A-202ENST00000535997 SLC26A1Q9H2B4 701 aa14.17□□□□□ -0.14
CHMP1A-202ENST00000535997 PNRC2Q9NPJ4 139 aaKnown RBP14.17□□□□□ -0.14
CHMP1A-202ENST00000535997 ZNF319Q9P2F9 582 aa14.17□□□□□ -0.14
CHMP1A-202ENST00000535997 WNT16Q9UBV4 365 aa14.17□□□□□ -0.14
CHMP1A-202ENST00000535997 ANAPC10Q9UM13 185 aa14.17□□□□□ -0.14
CHMP1A-202ENST00000535997 FAM25EA8MYX2 175 aa14.17□□□□□ -0.14
CHMP1A-202ENST00000535997 ZNF814B7Z6K7 855 aa14.17□□□□□ -0.14
CHMP1A-202ENST00000535997 CDC14BO60729 498 aa14.17□□□□□ -0.14
CHMP1A-202ENST00000535997 PMP2P02689 132 aa14.17□□□□□ -0.14
CHMP1A-202ENST00000535997 SMAD2Q15796 467 aaKnown RBP14.17□□□□□ -0.14
CHMP1A-202ENST00000535997 PNLIPRP3Q17RR3 467 aa14.17□□□□□ -0.14
CHMP1A-202ENST00000535997 TMEM176BQ3YBM2 270 aaPredicted RBP14.17□□□□□ -0.14
CHMP1A-202ENST00000535997 VAX1Q5SQQ9 334 aa14.17□□□□□ -0.14
CHMP1A-202ENST00000535997 CARD17Q5XLA6 110 aa14.17□□□□□ -0.14
CHMP1A-202ENST00000535997 PTCRAQ6ISU1 281 aaPredicted RBP14.17□□□□□ -0.14
CHMP1A-202ENST00000535997 TFAP2EQ6VUC0 442 aa14.17□□□□□ -0.14
CHMP1A-202ENST00000535997 STPG2Q8N412 459 aa14.17□□□□□ -0.14
CHMP1A-202ENST00000535997 WDSUB1Q8N9V3 476 aa14.17□□□□□ -0.14
CHMP1A-202ENST00000535997 ADAD2Q8NCV1 583 aaKnown RBP14.17□□□□□ -0.14
CHMP1A-202ENST00000535997 TMEM41AQ96HV5 264 aa14.17□□□□□ -0.14
CHMP1A-202ENST00000535997 SPACA5Q96QH8 159 aa14.17□□□□□ -0.14
CHMP1A-202ENST00000535997 RASL10BQ96S79 203 aa14.17□□□□□ -0.14
CHMP1A-202ENST00000535997 IGHV5-10-1A0A0J9YXX1 117 aa14.16□□□□□ -0.14
CHMP1A-202ENST00000535997 A0A1W2PQM1 296 aa14.16□□□□□ -0.14
CHMP1A-202ENST00000535997 AQP7P3A6NL99 342 aa14.16□□□□□ -0.14
CHMP1A-202ENST00000535997 CEACAM18A8MTB9 384 aa14.16□□□□□ -0.14
CHMP1A-202ENST00000535997 SMAD9O15198 467 aaKnown RBP14.16□□□□□ -0.14
CHMP1A-202ENST00000535997 DKK1O94907 266 aa14.16□□□□□ -0.14
CHMP1A-202ENST00000535997 MPIG6BO95866 241 aa14.16□□□□□ -0.14
CHMP1A-202ENST00000535997 SLC2A1P11166 492 aa14.16□□□□□ -0.14
CHMP1A-202ENST00000535997 HIST1H1DP16402 221 aaKnown RBP14.16□□□□□ -0.14
CHMP1A-202ENST00000535997 CTSSP25774 331 aa14.16□□□□□ -0.14
CHMP1A-202ENST00000535997 DLSTP36957 453 aa14.16□□□□□ -0.14
CHMP1A-202ENST00000535997 LUMP51884 338 aaPredicted RBP14.16□□□□□ -0.14
CHMP1A-202ENST00000535997 GRB2P62993 217 aaKnown RBP14.16□□□□□ -0.14
CHMP1A-202ENST00000535997 ACTBL2Q562R1 376 aa14.16□□□□□ -0.14
CHMP1A-202ENST00000535997 PAN3Q58A45 887 aaKnown RBP14.16□□□□□ -0.14
CHMP1A-202ENST00000535997 TMEM128Q5BJH2 165 aa14.16□□□□□ -0.14
CHMP1A-202ENST00000535997 PLAC9Q5JTB6 97 aa14.16□□□□□ -0.14
CHMP1A-202ENST00000535997 RNF144BQ7Z419 303 aa14.16□□□□□ -0.14
CHMP1A-202ENST00000535997 ARRDC1Q8N5I2 433 aa14.16□□□□□ -0.14
CHMP1A-202ENST00000535997 FADS6Q8N9I5 356 aa14.16□□□□□ -0.14
CHMP1A-202ENST00000535997 OR56B1Q8NGI3 324 aa14.16□□□□□ -0.14
CHMP1A-202ENST00000535997 OCSTAMPQ9BR26 566 aa14.16□□□□□ -0.14
CHMP1A-202ENST00000535997 SOX7Q9BT81 388 aa14.16□□□□□ -0.14
CHMP1A-202ENST00000535997 ZNF471Q9BX82 626 aaPredicted RBP14.16□□□□□ -0.14
CHMP1A-202ENST00000535997 LDAHQ9H6V9 325 aa14.16□□□□□ -0.14
CHMP1A-202ENST00000535997 FN3KRPQ9HA64 309 aa14.16□□□□□ -0.14
CHMP1A-202ENST00000535997 WDR87Q6ZQQ6 2873 aa14.16□□□□□ -0.14
CHMP1A-202ENST00000535997 A0A0A6YYD4 124 aa14.16□□□□□ -0.14
CHMP1A-202ENST00000535997 TEX46H3BTG2 121 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms