RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 GPR21Q99679 349 aa2.49□□□□□ -2.01
PRKDC-205ENST00000535375 SAMD10Q9BYL1 202 aa2.49□□□□□ -2.01
PRKDC-205ENST00000535375 ZC4H2Q9NQZ6 224 aa2.49□□□□□ -2.01
PRKDC-205ENST00000535375 FAM49BQ9NUQ9 324 aa2.49□□□□□ -2.01
PRKDC-205ENST00000535375 SLC39A1Q9NY26 324 aa2.49□□□□□ -2.01
PRKDC-205ENST00000535375 COMMD3-BMI1R4GMX3 469 aa2.49□□□□□ -2.01
PRKDC-205ENST00000535375 TUBGCP6Q96RT7 1819 aa2.49□□□□□ -2.01
PRKDC-205ENST00000535375 PALLDQ8WX93 1383 aa2.49□□□□□ -2.01
PRKDC-205ENST00000535375 DOCK9Q9BZ29 2069 aa2.48□□□□□ -2.01
PRKDC-205ENST00000535375 IGKV3D-11A0A0A0MRZ8 115 aa2.48□□□□□ -2.01
PRKDC-205ENST00000535375 IGKV1-8A0A0C4DH67 115 aa2.48□□□□□ -2.01
PRKDC-205ENST00000535375 A0A0J9YXV3 536 aa2.48□□□□□ -2.01
PRKDC-205ENST00000535375 A0A0U1RQV1 116 aa2.48□□□□□ -2.01
PRKDC-205ENST00000535375 ZNF850A8MQ14 1090 aa2.48□□□□□ -2.01
PRKDC-205ENST00000535375 ANKRD65E5RJM6 399 aa2.48□□□□□ -2.01
PRKDC-205ENST00000535375 DNASE2O00115 360 aaPredicted RBP2.48□□□□□ -2.01
PRKDC-205ENST00000535375 PLPP1O14494 284 aa2.48□□□□□ -2.01
PRKDC-205ENST00000535375 GCM2O75603 506 aaPredicted RBP2.48□□□□□ -2.01
PRKDC-205ENST00000535375 IGKV1D-16P01601 117 aa2.48□□□□□ -2.01
PRKDC-205ENST00000535375 KLK1P06870 262 aa2.48□□□□□ -2.01
PRKDC-205ENST00000535375 HCAR3P49019 387 aa2.48□□□□□ -2.01
PRKDC-205ENST00000535375 P2RX1P51575 399 aa2.48□□□□□ -2.01
PRKDC-205ENST00000535375 CARD18P57730 90 aa2.48□□□□□ -2.01
PRKDC-205ENST00000535375 TAS2R39P59534 338 aa2.48□□□□□ -2.01
PRKDC-205ENST00000535375 UBE2NP61088 152 aaKnown RBP2.48□□□□□ -2.01
PRKDC-205ENST00000535375 ATP6V0D1P61421 351 aa2.48□□□□□ -2.01
PRKDC-205ENST00000535375 ZNF816Q0VGE8 651 aaPredicted RBP2.48□□□□□ -2.01
PRKDC-205ENST00000535375 PRMT9Q6P2P2 845 aa2.48□□□□□ -2.01
PRKDC-205ENST00000535375 C16orf87Q6PH81 154 aa2.48□□□□□ -2.01
PRKDC-205ENST00000535375 BRD3OSQ6XYD6 125 aa2.48□□□□□ -2.01
PRKDC-205ENST00000535375 ZNF547Q8IVP9 402 aa2.48□□□□□ -2.01
PRKDC-205ENST00000535375 CBR4Q8N4T8 237 aa2.48□□□□□ -2.01
PRKDC-205ENST00000535375 COX18Q8N8Q8 333 aa2.48□□□□□ -2.01
PRKDC-205ENST00000535375 NECAP1Q8NC96 275 aa2.48□□□□□ -2.01
PRKDC-205ENST00000535375 OR5T3Q8NGG3 340 aa2.48□□□□□ -2.01
PRKDC-205ENST00000535375 MITD1Q8WV92 249 aa2.48□□□□□ -2.01
PRKDC-205ENST00000535375 ISOC2Q96AB3 205 aa2.48□□□□□ -2.01
PRKDC-205ENST00000535375 DCPSQ96C86 337 aaKnown RBP2.48□□□□□ -2.01
PRKDC-205ENST00000535375 SGTBQ96EQ0 304 aa2.48□□□□□ -2.01
PRKDC-205ENST00000535375 SULT4A1Q9BR01 284 aa2.48□□□□□ -2.01
PRKDC-205ENST00000535375 SLC17A7Q9P2U7 560 aa2.48□□□□□ -2.01
PRKDC-205ENST00000535375 PTPRTO14522 1441 aa2.48□□□□□ -2.01
PRKDC-205ENST00000535375 YEATS2Q9ULM3 1422 aa2.48□□□□□ -2.01
PRKDC-205ENST00000535375 TET2Q6N021 2002 aaPredicted RBP2.47□□□□□ -2.01
PRKDC-205ENST00000535375 PCDH11XQ9BZA7 1347 aa2.47□□□□□ -2.01
PRKDC-205ENST00000535375 HSBP1O75506 76 aa2.47□□□□□ -2.01
PRKDC-205ENST00000535375 CCNKO75909 580 aa2.47□□□□□ -2.01
PRKDC-205ENST00000535375 TGM6O95932 706 aa2.47□□□□□ -2.01
PRKDC-205ENST00000535375 C1GALT1C1LP0DN25 315 aa2.47□□□□□ -2.01
PRKDC-205ENST00000535375 RAB5AP20339 215 aa2.47□□□□□ -2.01
PRKDC-205ENST00000535375 IL32P24001 234 aa2.47□□□□□ -2.01
PRKDC-205ENST00000535375 GABRR2P28476 465 aa2.47□□□□□ -2.01
PRKDC-205ENST00000535375 SSTR5P35346 364 aa2.47□□□□□ -2.01
PRKDC-205ENST00000535375 CSKP41240 450 aa2.47□□□□□ -2.01
PRKDC-205ENST00000535375 PPICP45877 212 aa2.47□□□□□ -2.01
PRKDC-205ENST00000535375 CCNG1P51959 295 aa2.47□□□□□ -2.01
PRKDC-205ENST00000535375 CLDN6P56747 220 aa2.47□□□□□ -2.01
PRKDC-205ENST00000535375 RPS23P62266 143 aaKnown RBP2.47□□□□□ -2.01
PRKDC-205ENST00000535375 ART3Q13508 389 aa2.47□□□□□ -2.01
PRKDC-205ENST00000535375 TSC22D1Q15714 1073 aa2.47□□□□□ -2.01
PRKDC-205ENST00000535375 HNRNPA1L2Q32P51 320 aaKnown RBP2.47□□□□□ -2.01
PRKDC-205ENST00000535375 ORMDL2Q53FV1 153 aa2.47□□□□□ -2.01
PRKDC-205ENST00000535375 TPRG1LQ5T0D9 272 aa2.47□□□□□ -2.01
PRKDC-205ENST00000535375 CALHM1Q8IU99 346 aa2.47□□□□□ -2.01
PRKDC-205ENST00000535375 KIF2BQ8N4N8 673 aa2.47□□□□□ -2.01
PRKDC-205ENST00000535375 TRAM1L1Q8N609 369 aa2.47□□□□□ -2.01
PRKDC-205ENST00000535375 METTL13Q8N6R0 699 aa2.47□□□□□ -2.01
PRKDC-205ENST00000535375 GATSQ8NAP1 163 aa2.47□□□□□ -2.01
PRKDC-205ENST00000535375 OR11H7Q8NGC8 314 aa2.47□□□□□ -2.01
PRKDC-205ENST00000535375 COQ8AQ8NI60 647 aa2.47□□□□□ -2.01
PRKDC-205ENST00000535375 PIFOQ8TCI5 191 aa2.47□□□□□ -2.01
PRKDC-205ENST00000535375 C15orf40Q8WUR7 153 aa2.47□□□□□ -2.01
PRKDC-205ENST00000535375 LRRC29Q8WV35 223 aa2.47□□□□□ -2.01
PRKDC-205ENST00000535375 PIH1D2Q8WWB5 315 aa2.47□□□□□ -2.01
PRKDC-205ENST00000535375 CAMK2N2Q96S95 79 aa2.47□□□□□ -2.01
PRKDC-205ENST00000535375 RNF5Q99942 180 aa2.47□□□□□ -2.01
PRKDC-205ENST00000535375 NAA50Q9GZZ1 169 aaKnown RBP2.47□□□□□ -2.01
PRKDC-205ENST00000535375 MED4Q9NPJ6 270 aa2.47□□□□□ -2.01
PRKDC-205ENST00000535375 DYRK4Q9NR20 520 aa2.47□□□□□ -2.01
PRKDC-205ENST00000535375 DDX19AQ9NUU7 478 aaKnown RBP2.47□□□□□ -2.01
PRKDC-205ENST00000535375 MCUBQ9NWR8 336 aa2.47□□□□□ -2.01
PRKDC-205ENST00000535375 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.47□□□□□ -2.01
PRKDC-205ENST00000535375 H3BN98 237 aa2.46□□□□□ -2.02
PRKDC-205ENST00000535375 SOCS1O15524 211 aa2.46□□□□□ -2.02
PRKDC-205ENST00000535375 NMT2O60551 498 aa2.46□□□□□ -2.02
PRKDC-205ENST00000535375 MPDU1O75352 247 aa2.46□□□□□ -2.02
PRKDC-205ENST00000535375 RDH16O75452 317 aa2.46□□□□□ -2.02
PRKDC-205ENST00000535375 CBR3O75828 277 aa2.46□□□□□ -2.02
PRKDC-205ENST00000535375 SEMA3DO95025 777 aa2.46□□□□□ -2.02
PRKDC-205ENST00000535375 CDRT1O95170 752 aa2.46□□□□□ -2.02
PRKDC-205ENST00000535375 CSTAP01040 98 aa2.46□□□□□ -2.02
PRKDC-205ENST00000535375 CATP04040 527 aaKnown RBP2.46□□□□□ -2.02
PRKDC-205ENST00000535375 PMCHP20382 165 aa2.46□□□□□ -2.02
PRKDC-205ENST00000535375 MYCNOSP40205 109 aa2.46□□□□□ -2.02
PRKDC-205ENST00000535375 PSMD4P55036 377 aaKnown RBP2.46□□□□□ -2.02
PRKDC-205ENST00000535375 SMUG1Q53HV7 270 aa2.46□□□□□ -2.02
PRKDC-205ENST00000535375 MLIPQ5VWP3 458 aa2.46□□□□□ -2.02
PRKDC-205ENST00000535375 RWDD4Q6NW29 188 aaKnown RBP2.46□□□□□ -2.02
PRKDC-205ENST00000535375 SLC35D2Q76EJ3 337 aa2.46□□□□□ -2.02
PRKDC-205ENST00000535375 OR2W3Q7Z3T1 314 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms