RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 MOV10Q9HCE1 1003 aaKnown RBP2.39□□□□□ -2.03
CHMP4A-208ENST00000534106 MID1IP1Q9NPA3 183 aa2.39□□□□□ -2.03
CHMP4A-208ENST00000534106 SLCO1B3Q9NPD5 702 aa2.39□□□□□ -2.03
CHMP4A-208ENST00000534106 TCF7L2Q9NQB0 619 aa2.39□□□□□ -2.03
CHMP4A-208ENST00000534106 BATF3Q9NR55 127 aa2.39□□□□□ -2.03
CHMP4A-208ENST00000534106 SIRT7Q9NRC8 400 aa2.39□□□□□ -2.03
CHMP4A-208ENST00000534106 NDE1Q9NXR1 346 aa2.39□□□□□ -2.03
CHMP4A-208ENST00000534106 TMEM216Q9P0N5 145 aa2.39□□□□□ -2.03
CHMP4A-208ENST00000534106 ZNRD1Q9P1U0 126 aa2.39□□□□□ -2.03
CHMP4A-208ENST00000534106 CTSZQ9UBR2 303 aa2.39□□□□□ -2.03
CHMP4A-208ENST00000534106 CLN8Q9UBY8 286 aa2.39□□□□□ -2.03
CHMP4A-208ENST00000534106 MIOXQ9UGB7 285 aa2.39□□□□□ -2.03
CHMP4A-208ENST00000534106 PPP1R3CQ9UQK1 317 aa2.39□□□□□ -2.03
CHMP4A-208ENST00000534106 RASD1Q9Y272 281 aa2.39□□□□□ -2.03
CHMP4A-208ENST00000534106 FIS1Q9Y3D6 152 aa2.39□□□□□ -2.03
CHMP4A-208ENST00000534106 WDR45Q9Y484 360 aa2.39□□□□□ -2.03
CHMP4A-208ENST00000534106 IGKV1D-42A0A075B6H8 117 aa2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 IGLV5-39A0A0G2JS06 123 aa2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 TCRBV4S1A1TA0A5B7 111 aa2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 MEIOCA2RUB1 952 aa2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 C5orf49A4QMS7 147 aa2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 DPPA5A6NC42 116 aa2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 ZNF726A6NNF4 738 aa2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 E9PQ18 207 aa2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 C11orf98E9PRG8 122 aa2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 F5H5P2 479 aa2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 J3KRW8 73 aa2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 TIMM8AO60220 97 aaPredicted RBP2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 TBX19O60806 448 aa2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 EDF1O60869 148 aaKnown RBP2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 ENTPD5O75356 428 aa2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 MFN2O95140 757 aa2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 UBL3O95164 117 aa2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 AHSA1O95433 338 aa2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 CPSF4O95639 269 aaKnown RBP2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 TOMM40O96008 361 aa2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 TFF1P04155 84 aa2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 CD55P08174 381 aa2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 MMP7P09237 267 aaPredicted RBP2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 ZCCHC18P0CG32 403 aa2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 NCF2P19878 526 aaPredicted RBP2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 CALB2P22676 271 aa2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 AHCYP23526 432 aa2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 MT3P25713 68 aa2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 FKBP2P26885 142 aaKnown RBP2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 SOAT1P35610 550 aa2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 VHLP40337 213 aa2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 CRATP43155 626 aa2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 MAGEA12P43365 314 aa2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 SERPINB8P50452 374 aa2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 BMXP51813 675 aa2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 BIDP55957 195 aa2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 BPIFB3P59826 476 aa2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 PPP1CBP62140 327 aa2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 BLCAPP62952 87 aa2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 RPL38P63173 70 aaKnown RBP2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 CFHR3Q02985 330 aa2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 BNIP1Q12981 228 aa2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 TMED1Q13445 227 aa2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 MELKQ14680 651 aa2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 PTGR1Q14914 329 aa2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 MAPK11Q15759 364 aa2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 MOGQ16653 247 aa2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 LRRC36Q1X8D7 754 aa2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 TBC1D28Q2M2D7 210 aa2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 ZNF404Q494X3 552 aa2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 GALNTL6Q49A17 601 aa2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 GPAT3Q53EU6 434 aa2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 XKR7Q5GH72 579 aa2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 MRPL2Q5T653 305 aaKnown RBP2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 OTPQ5XKR4 325 aa2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 TET2Q6N021 2002 aaPredicted RBP2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 CGB2Q6NT52 195 aa2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 IZUMO2Q6UXV1 221 aa2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 H1FNTQ75WM6 255 aaPredicted RBP2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 BTN2A1Q7KYR7 527 aa2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 SLC16A14Q7RTX9 510 aa2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 C16orf62Q7Z3J2 963 aa2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 PIWIL3Q7Z3Z3 882 aaKnown RBP2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 VMO1Q7Z5L0 202 aa2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 PIGWQ7Z7B1 504 aa2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 SERPINA11Q86U17 422 aa2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 ANKRD46Q86W74 232 aa2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 UEVLDQ8IX04 471 aa2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 Q8N7P7 452 aa2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 RBM15BQ8NDT2 890 aaKnown RBP2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 OR10AD1Q8NGE0 317 aa2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 OR8B3Q8NGG8 313 aa2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 OR2T6Q8NHC8 308 aa2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 MFSD8Q8NHS3 518 aa2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 PSMA8Q8TAA3 256 aa2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 MPLKIPQ8TAP9 179 aa2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 PIFOQ8TCI5 191 aa2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 PNPT1Q8TCS8 783 aaKnown RBP2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 AGR3Q8TD06 166 aa2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 TCP10LQ8TDR4 215 aa2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 WIPF2Q8TF74 440 aaPredicted RBP2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 DCAKDQ8WVC6 231 aa2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 SLC7A6Q92536 515 aa2.38□□□□□ -2.03
CHMP4A-208ENST00000534106 HDAC2Q92769 488 aaKnown RBP2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms