RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 RIMS4Q9H426 269 aaPredicted RBP10.13□□□□□ -0.79
AMBRA1-211ENST00000533727 ZCCHC4Q9H5U6 513 aa10.13□□□□□ -0.79
AMBRA1-211ENST00000533727 EHFQ9NZC4 300 aa10.13□□□□□ -0.79
AMBRA1-211ENST00000533727 R4GMQ9 66 aa10.13□□□□□ -0.79
AMBRA1-211ENST00000533727 LNP1A1A4G5 178 aa10.13□□□□□ -0.79
AMBRA1-211ENST00000533727 TMEM127O75204 238 aa10.13□□□□□ -0.79
AMBRA1-211ENST00000533727 NRASP01111 189 aa10.13□□□□□ -0.79
AMBRA1-211ENST00000533727 IFI6P09912 130 aa10.13□□□□□ -0.79
AMBRA1-211ENST00000533727 RAB1AP62820 205 aa10.13□□□□□ -0.79
AMBRA1-211ENST00000533727 SLC9A3R2Q15599 337 aa10.13□□□□□ -0.79
AMBRA1-211ENST00000533727 TMPRSS11FQ6ZWK6 438 aa10.13□□□□□ -0.79
AMBRA1-211ENST00000533727 SLC36A1Q7Z2H8 476 aa10.13□□□□□ -0.79
AMBRA1-211ENST00000533727 OR52I1Q8NGK6 324 aa10.13□□□□□ -0.79
AMBRA1-211ENST00000533727 LGALS14Q8TCE9 139 aa10.13□□□□□ -0.79
AMBRA1-211ENST00000533727 DYNC2LI1Q8TCX1 351 aa10.13□□□□□ -0.79
AMBRA1-211ENST00000533727 YIPF5Q969M3 257 aa10.13□□□□□ -0.79
AMBRA1-211ENST00000533727 PIGTQ969N2 578 aa10.13□□□□□ -0.79
AMBRA1-211ENST00000533727 ABHD6Q9BV23 337 aa10.13□□□□□ -0.79
AMBRA1-211ENST00000533727 MYOZ1Q9NP98 299 aaPredicted RBP10.13□□□□□ -0.79
AMBRA1-211ENST00000533727 MAP1BP46821 2468 aaKnown RBP10.12□□□□□ -0.79
AMBRA1-211ENST00000533727 LOC107986453A0A1B0GWG9 222 aa10.12□□□□□ -0.79
AMBRA1-211ENST00000533727 CDK2AP1O14519 115 aa10.12□□□□□ -0.79
AMBRA1-211ENST00000533727 ENSAO43768 121 aaKnown RBP10.12□□□□□ -0.79
AMBRA1-211ENST00000533727 SHC1P29353 583 aa10.12□□□□□ -0.79
AMBRA1-211ENST00000533727 SNCAP37840 140 aa10.12□□□□□ -0.79
AMBRA1-211ENST00000533727 GP2P55259 537 aaKnown RBP10.12□□□□□ -0.79
AMBRA1-211ENST00000533727 INSM1Q01101 510 aaPredicted RBP10.12□□□□□ -0.79
AMBRA1-211ENST00000533727 DRAM2Q6UX65 266 aa10.12□□□□□ -0.79
AMBRA1-211ENST00000533727 USP51Q70EK9 711 aa10.12□□□□□ -0.79
AMBRA1-211ENST00000533727 ZNF808Q8N4W9 903 aaPredicted RBP10.12□□□□□ -0.79
AMBRA1-211ENST00000533727 OR1F12Q8NHA8 337 aa10.12□□□□□ -0.79
AMBRA1-211ENST00000533727 FAM213BQ8TBF2 198 aa10.12□□□□□ -0.79
AMBRA1-211ENST00000533727 ANKRD9Q96BM1 317 aaPredicted RBP10.12□□□□□ -0.79
AMBRA1-211ENST00000533727 DUS3LQ96G46 650 aaKnown RBP10.12□□□□□ -0.79
AMBRA1-211ENST00000533727 GABARAPL3Q9BY60 117 aa10.12□□□□□ -0.79
AMBRA1-211ENST00000533727 SPAG17Q6Q759 2223 aa10.12□□□□□ -0.79
AMBRA1-211ENST00000533727 A0A1W2PPV9 198 aa10.12□□□□□ -0.79
AMBRA1-211ENST00000533727 ACOD1A6NK06 481 aa10.12□□□□□ -0.79
AMBRA1-211ENST00000533727 CYTIPO60759 359 aa10.12□□□□□ -0.79
AMBRA1-211ENST00000533727 EML2O95834 649 aa10.12□□□□□ -0.79
AMBRA1-211ENST00000533727 GIPP09681 153 aaPredicted RBP10.12□□□□□ -0.79
AMBRA1-211ENST00000533727 GNB3P16520 340 aa10.12□□□□□ -0.79
AMBRA1-211ENST00000533727 FABP6P51161 128 aa10.12□□□□□ -0.79
AMBRA1-211ENST00000533727 SLC25A1P53007 311 aa10.12□□□□□ -0.79
AMBRA1-211ENST00000533727 KIAA0040Q15053 153 aa10.12□□□□□ -0.79
AMBRA1-211ENST00000533727 LIPNQ5VXI9 398 aa10.12□□□□□ -0.79
AMBRA1-211ENST00000533727 TEX29Q8N6K0 151 aa10.12□□□□□ -0.79
AMBRA1-211ENST00000533727 BHLHE23Q8NDY6 225 aa10.12□□□□□ -0.79
AMBRA1-211ENST00000533727 OR2M7Q8NG81 312 aa10.12□□□□□ -0.79
AMBRA1-211ENST00000533727 DNAJB12Q9NXW2 375 aaKnown RBP10.12□□□□□ -0.79
AMBRA1-211ENST00000533727 B9D1Q9UPM9 204 aa10.12□□□□□ -0.79
AMBRA1-211ENST00000533727 ANKRD61A6NGH8 418 aa10.12□□□□□ -0.79
AMBRA1-211ENST00000533727 NUDT19A8MXV4 375 aa10.12□□□□□ -0.79
AMBRA1-211ENST00000533727 EPHA1P21709 976 aa10.12□□□□□ -0.79
AMBRA1-211ENST00000533727 CAMK2BQ13554 666 aa10.12□□□□□ -0.79
AMBRA1-211ENST00000533727 SPINK14Q6IE38 97 aa10.12□□□□□ -0.79
AMBRA1-211ENST00000533727 PLXDC2Q6UX71 529 aa10.12□□□□□ -0.79
AMBRA1-211ENST00000533727 B3GLCTQ6Y288 498 aa10.12□□□□□ -0.79
AMBRA1-211ENST00000533727 TMEM105Q8N8V8 129 aa10.12□□□□□ -0.79
AMBRA1-211ENST00000533727 OR4C3Q8NH37 302 aa10.12□□□□□ -0.79
AMBRA1-211ENST00000533727 REEP6Q96HR9 211 aa10.12□□□□□ -0.79
AMBRA1-211ENST00000533727 ALKBH3Q96Q83 286 aaPredicted RBP10.12□□□□□ -0.79
AMBRA1-211ENST00000533727 SEC22CQ9BRL7 303 aa10.12□□□□□ -0.79
AMBRA1-211ENST00000533727 BRCA1P38398 1863 aaKnown RBP10.12□□□□□ -0.79
AMBRA1-211ENST00000533727 LOC100289279A0A1B0GTE1 492 aa10.12□□□□□ -0.79
AMBRA1-211ENST00000533727 TRIM77I1YAP6 450 aa10.12□□□□□ -0.79
AMBRA1-211ENST00000533727 TNFSF12O43508 249 aa10.12□□□□□ -0.79
AMBRA1-211ENST00000533727 ELK1P19419 428 aa10.12□□□□□ -0.79
AMBRA1-211ENST00000533727 AADACL3Q5VUY0 350 aa10.12□□□□□ -0.79
AMBRA1-211ENST00000533727 B3GNTL1Q67FW5 361 aaPredicted RBP10.12□□□□□ -0.79
AMBRA1-211ENST00000533727 NANPQ8TBE9 248 aa10.12□□□□□ -0.79
AMBRA1-211ENST00000533727 ZDHHC16Q969W1 377 aa10.12□□□□□ -0.79
AMBRA1-211ENST00000533727 SLCO4A1Q96BD0 722 aa10.12□□□□□ -0.79
AMBRA1-211ENST00000533727 GCM1Q9NP62 436 aa10.12□□□□□ -0.79
AMBRA1-211ENST00000533727 ISYNA1Q9NPH2 558 aa10.12□□□□□ -0.79
AMBRA1-211ENST00000533727 SERTAD4Q9NUC0 356 aa10.12□□□□□ -0.79
AMBRA1-211ENST00000533727 PPP1R14DQ9NXH3 145 aa10.12□□□□□ -0.79
AMBRA1-211ENST00000533727 GDF2Q9UK05 429 aaPredicted RBP10.12□□□□□ -0.79
AMBRA1-211ENST00000533727 CEP290O15078 2479 aa10.11□□□□□ -0.79
AMBRA1-211ENST00000533727 CCL21O00585 134 aa10.11□□□□□ -0.79
AMBRA1-211ENST00000533727 TERTO14746 1132 aaKnown RBP10.11□□□□□ -0.79
AMBRA1-211ENST00000533727 FAM157BP0CG42 384 aa10.11□□□□□ -0.79
AMBRA1-211ENST00000533727 MESP2Q0VG99 397 aa10.11□□□□□ -0.79
AMBRA1-211ENST00000533727 HES1Q14469 280 aa10.11□□□□□ -0.79
AMBRA1-211ENST00000533727 PP6455Q8WZ26 134 aa10.11□□□□□ -0.79
AMBRA1-211ENST00000533727 RAB1CQ92928 201 aa10.11□□□□□ -0.79
AMBRA1-211ENST00000533727 GUCD1Q96NT3 240 aa10.11□□□□□ -0.79
AMBRA1-211ENST00000533727 TSSK2Q96PF2 358 aa10.11□□□□□ -0.79
AMBRA1-211ENST00000533727 CYR61O00622 381 aa10.11□□□□□ -0.79
AMBRA1-211ENST00000533727 PMS2P2O95744 297 aa10.11□□□□□ -0.79
AMBRA1-211ENST00000533727 FABP1P07148 127 aa10.11□□□□□ -0.79
AMBRA1-211ENST00000533727 GUSBP08236 651 aa10.11□□□□□ -0.79
AMBRA1-211ENST00000533727 GNB2P62879 340 aa10.11□□□□□ -0.79
AMBRA1-211ENST00000533727 RNF151Q2KHN1 245 aa10.11□□□□□ -0.79
AMBRA1-211ENST00000533727 HYAL4Q2M3T9 481 aa10.11□□□□□ -0.79
AMBRA1-211ENST00000533727 LRRC10Q5BKY1 277 aa10.11□□□□□ -0.79
AMBRA1-211ENST00000533727 C1orf174Q8IYL3 243 aa10.11□□□□□ -0.79
AMBRA1-211ENST00000533727 GCNT2Q8N0V5 402 aa10.11□□□□□ -0.79
AMBRA1-211ENST00000533727 CRIPAKQ8N1N5 446 aa10.11□□□□□ -0.79
AMBRA1-211ENST00000533727 OR13G1Q8NGZ3 307 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms