RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 FAM3AP98173 230 aa17.27■□□□□ 0.35
CCS-208ENST00000533244 TMED1Q13445 227 aa17.27■□□□□ 0.35
CCS-208ENST00000533244 SLC35F2Q8IXU6 374 aa17.27■□□□□ 0.35
CCS-208ENST00000533244 ZNF679Q8IYX0 411 aa17.27■□□□□ 0.35
CCS-208ENST00000533244 CELF2-AS1Q8N7Q2 184 aa17.27■□□□□ 0.35
CCS-208ENST00000533244 OR56B2PQ8NGI1 322 aa17.27■□□□□ 0.35
CCS-208ENST00000533244 UBE2FQ969M7 185 aa17.27■□□□□ 0.35
CCS-208ENST00000533244 REEP6Q96HR9 211 aa17.27■□□□□ 0.35
CCS-208ENST00000533244 SIGLEC11Q96RL6 698 aa17.27■□□□□ 0.35
CCS-208ENST00000533244 OR10A2Q9H208 303 aa17.27■□□□□ 0.35
CCS-208ENST00000533244 RGCCQ9H4X1 137 aa17.27■□□□□ 0.35
CCS-208ENST00000533244 GCM1Q9NP62 436 aa17.27■□□□□ 0.35
CCS-208ENST00000533244 YAE1D1Q9NRH1 226 aa17.27■□□□□ 0.35
CCS-208ENST00000533244 TMEM106BQ9NUM4 274 aa17.27■□□□□ 0.35
CCS-208ENST00000533244 CLN6Q9NWW5 311 aa17.27■□□□□ 0.35
CCS-208ENST00000533244 GGT3PA6NGU5 568 aa17.26■□□□□ 0.35
CCS-208ENST00000533244 A8MV72 311 aaPredicted RBP17.26■□□□□ 0.35
CCS-208ENST00000533244 F5H5P2 479 aa17.26■□□□□ 0.35
CCS-208ENST00000533244 PHYHO14832 338 aa17.26■□□□□ 0.35
CCS-208ENST00000533244 CFL1P23528 166 aaKnown RBP17.26■□□□□ 0.35
CCS-208ENST00000533244 CD200P41217 278 aa17.26■□□□□ 0.35
CCS-208ENST00000533244 GATA4P43694 442 aa17.26■□□□□ 0.35
CCS-208ENST00000533244 SRP9P49458 86 aaKnown RBP17.26■□□□□ 0.35
CCS-208ENST00000533244 SNRPGP62308 76 aaKnown RBP17.26■□□□□ 0.35
CCS-208ENST00000533244 MVKQ03426 396 aa17.26■□□□□ 0.35
CCS-208ENST00000533244 POU4F2Q12837 409 aa17.26■□□□□ 0.35
CCS-208ENST00000533244 HNRNPA0Q13151 305 aaKnown RBP17.26■□□□□ 0.35
CCS-208ENST00000533244 MAB21L1Q13394 359 aa17.26■□□□□ 0.35
CCS-208ENST00000533244 TIGD6Q17RP2 521 aa17.26■□□□□ 0.35
CCS-208ENST00000533244 AVPI1Q5T686 147 aa17.26■□□□□ 0.35
CCS-208ENST00000533244 OR51G2Q8NGK0 314 aa17.26■□□□□ 0.35
CCS-208ENST00000533244 RAB1CQ92928 201 aa17.26■□□□□ 0.35
CCS-208ENST00000533244 TIMD4Q96H15 378 aa17.26■□□□□ 0.35
CCS-208ENST00000533244 POM121Q96HA1 1249 aa17.26■□□□□ 0.35
CCS-208ENST00000533244 PGAM5Q96HS1 289 aa17.26■□□□□ 0.35
CCS-208ENST00000533244 MROQ9BYG7 248 aa17.26■□□□□ 0.35
CCS-208ENST00000533244 BRD7Q9NPI1 651 aa17.26■□□□□ 0.35
CCS-208ENST00000533244 TMEM160Q9NX00 188 aa17.26■□□□□ 0.35
CCS-208ENST00000533244 FAM206AQ9NX38 181 aa17.26■□□□□ 0.35
CCS-208ENST00000533244 IMPAD1Q9NX62 359 aa17.26■□□□□ 0.35
CCS-208ENST00000533244 PPP1R3CQ9UQK1 317 aa17.26■□□□□ 0.35
CCS-208ENST00000533244 NOP16Q9Y3C1 178 aaKnown RBP17.26■□□□□ 0.35
CCS-208ENST00000533244 ACOD1A6NK06 481 aa17.25■□□□□ 0.35
CCS-208ENST00000533244 IFNL4K9M1U5 179 aa17.25■□□□□ 0.35
CCS-208ENST00000533244 PTBP3O95758 552 aaKnown RBP17.25■□□□□ 0.35
CCS-208ENST00000533244 CA6P23280 308 aa17.25■□□□□ 0.35
CCS-208ENST00000533244 MMP16P51512 607 aa17.25■□□□□ 0.35
CCS-208ENST00000533244 CDH15P55291 814 aa17.25■□□□□ 0.35
CCS-208ENST00000533244 CXCR4P61073 352 aa17.25■□□□□ 0.35
CCS-208ENST00000533244 OR8B8Q15620 311 aa17.25■□□□□ 0.35
CCS-208ENST00000533244 ZNF322Q6U7Q0 402 aaPredicted RBP17.25■□□□□ 0.35
CCS-208ENST00000533244 OR8B12Q8NGG6 310 aa17.25■□□□□ 0.35
CCS-208ENST00000533244 RFKQ969G6 155 aa17.25■□□□□ 0.35
CCS-208ENST00000533244 NARFLQ9H6Q4 476 aa17.25■□□□□ 0.35
CCS-208ENST00000533244 PSMD9O00233 223 aa17.24■□□□□ 0.35
CCS-208ENST00000533244 GMDSO60547 372 aa17.24■□□□□ 0.35
CCS-208ENST00000533244 SRSF10O75494 262 aaKnown RBP17.24■□□□□ 0.35
CCS-208ENST00000533244 IGHV2-70P01814 119 aa17.24■□□□□ 0.35
CCS-208ENST00000533244 OCLNQ16625 522 aa17.24■□□□□ 0.35
CCS-208ENST00000533244 ZNF181Q2M3W8 571 aa17.24■□□□□ 0.35
CCS-208ENST00000533244 KLBQ86Z14 1044 aa17.24■□□□□ 0.35
CCS-208ENST00000533244 ADAT1Q9BUB4 502 aaKnown RBP17.24■□□□□ 0.35
CCS-208ENST00000533244 TTTY10Q9BZA0 68 aa17.24■□□□□ 0.35
CCS-208ENST00000533244 ZNF391Q9UJN7 358 aa17.24■□□□□ 0.35
CCS-208ENST00000533244 NPTNQ9Y639 398 aa17.24■□□□□ 0.35
CCS-208ENST00000533244 LOC100289279A0A1B0GTE1 492 aa17.23■□□□□ 0.35
CCS-208ENST00000533244 ANKRD65E5RJM6 399 aa17.23■□□□□ 0.35
CCS-208ENST00000533244 ZNF670-ZNF695F2Z2N8 137 aa17.23■□□□□ 0.35
CCS-208ENST00000533244 TMEM178BH3BS89 294 aa17.23■□□□□ 0.35
CCS-208ENST00000533244 DLGAP1O14490 977 aa17.23■□□□□ 0.35
CCS-208ENST00000533244 CRLF1O75462 422 aa17.23■□□□□ 0.35
CCS-208ENST00000533244 ANPEPP15144 967 aa17.23■□□□□ 0.35
CCS-208ENST00000533244 GABRB1P18505 474 aa17.23■□□□□ 0.35
CCS-208ENST00000533244 RBMXP38159 391 aaKnown RBP17.23■□□□□ 0.35
CCS-208ENST00000533244 GSK3AP49840 483 aa17.23■□□□□ 0.35
CCS-208ENST00000533244 RIDAP52758 137 aaKnown RBP17.23■□□□□ 0.35
CCS-208ENST00000533244 EGR3Q06889 387 aa17.23■□□□□ 0.35
CCS-208ENST00000533244 OR8G1Q15617 311 aa17.23■□□□□ 0.35
CCS-208ENST00000533244 MEDAGQ5VYS4 303 aa17.23■□□□□ 0.35
CCS-208ENST00000533244 FAM166AQ6J272 317 aa17.23■□□□□ 0.35
CCS-208ENST00000533244 LINC01356Q8N9X3 169 aa17.23■□□□□ 0.35
CCS-208ENST00000533244 LYZL4Q96KX0 146 aa17.23■□□□□ 0.35
CCS-208ENST00000533244 RDH12Q96NR8 316 aa17.23■□□□□ 0.35
CCS-208ENST00000533244 GMPPBQ9Y5P6 360 aa17.23■□□□□ 0.35
CCS-208ENST00000533244 A0A0U1RQV5 110 aa17.22■□□□□ 0.35
CCS-208ENST00000533244 TMEM269A0A1B0GVZ9 245 aa17.22■□□□□ 0.35
CCS-208ENST00000533244 FAM157AC9JC47 383 aa17.22■□□□□ 0.35
CCS-208ENST00000533244 ENTPD6O75354 484 aa17.22■□□□□ 0.35
CCS-208ENST00000533244 IGLV3-1P01715 115 aa17.22■□□□□ 0.35
CCS-208ENST00000533244 OR2T7P0C7T2 308 aa17.22■□□□□ 0.35
CCS-208ENST00000533244 PMELP40967 661 aa17.22■□□□□ 0.35
CCS-208ENST00000533244 RCN1Q15293 331 aa17.22■□□□□ 0.35
CCS-208ENST00000533244 SSX6Q7RTT6 188 aa17.22■□□□□ 0.35
CCS-208ENST00000533244 PEG10Q86TG7 708 aaKnown RBP17.22■□□□□ 0.35
CCS-208ENST00000533244 OR2T27Q8NH04 317 aa17.22■□□□□ 0.35
CCS-208ENST00000533244 ZNF420Q8TAQ5 688 aaPredicted RBP17.22■□□□□ 0.35
CCS-208ENST00000533244 Q8TCH9 128 aa17.22■□□□□ 0.35
CCS-208ENST00000533244 ERGIC1Q969X5 290 aa17.22■□□□□ 0.35
CCS-208ENST00000533244 ZNF665Q9H7R5 613 aa17.22■□□□□ 0.35
CCS-208ENST00000533244 FAM118AQ9NWS6 357 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms