RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 CEACAM16Q2WEN9 425 aa9.66□□□□□ -0.86
TRAPPC4-213ENST00000533149 TP53I3Q53FA7 332 aa9.66□□□□□ -0.86
TRAPPC4-213ENST00000533149 ARMCX4Q5H9R4 360 aa9.66□□□□□ -0.86
TRAPPC4-213ENST00000533149 SLC18B1Q6NT16 456 aa9.66□□□□□ -0.86
TRAPPC4-213ENST00000533149 VHLLQ6RSH7 139 aa9.66□□□□□ -0.86
TRAPPC4-213ENST00000533149 C1orf229Q6ZS94 237 aaPredicted RBP9.66□□□□□ -0.86
TRAPPC4-213ENST00000533149 ZNF454Q8N9F8 522 aa9.66□□□□□ -0.86
TRAPPC4-213ENST00000533149 OR13F1Q8NGS4 319 aa9.66□□□□□ -0.86
TRAPPC4-213ENST00000533149 CLDND2Q8NHS1 167 aa9.66□□□□□ -0.86
TRAPPC4-213ENST00000533149 OTOSQ8NHW6 89 aa9.66□□□□□ -0.86
TRAPPC4-213ENST00000533149 NANPQ8TBE9 248 aa9.66□□□□□ -0.86
TRAPPC4-213ENST00000533149 TTTY10Q9BZA0 68 aa9.66□□□□□ -0.86
TRAPPC4-213ENST00000533149 ZMAT3Q9HA38 289 aaKnown RBP9.66□□□□□ -0.86
TRAPPC4-213ENST00000533149 ISYNA1Q9NPH2 558 aa9.66□□□□□ -0.86
TRAPPC4-213ENST00000533149 OBP2BQ9NPH6 170 aa9.66□□□□□ -0.86
TRAPPC4-213ENST00000533149 UPB1Q9UBR1 384 aa9.66□□□□□ -0.86
TRAPPC4-213ENST00000533149 METTL15A6NJ78 407 aa9.65□□□□□ -0.86
TRAPPC4-213ENST00000533149 PRR32B1ATL7 298 aa9.65□□□□□ -0.86
TRAPPC4-213ENST00000533149 ZNF587BE7ETH6 402 aa9.65□□□□□ -0.86
TRAPPC4-213ENST00000533149 RPL36A-HNRNPH2H7BZ11 118 aa9.65□□□□□ -0.86
TRAPPC4-213ENST00000533149 PHYHO14832 338 aa9.65□□□□□ -0.86
TRAPPC4-213ENST00000533149 LALBAP00709 142 aa9.65□□□□□ -0.86
TRAPPC4-213ENST00000533149 MT-ND5P03915 603 aa9.65□□□□□ -0.86
TRAPPC4-213ENST00000533149 NPR2P20594 1047 aa9.65□□□□□ -0.86
TRAPPC4-213ENST00000533149 MSR1P21757 451 aa9.65□□□□□ -0.86
TRAPPC4-213ENST00000533149 GPR6P46095 362 aaPredicted RBP9.65□□□□□ -0.86
TRAPPC4-213ENST00000533149 FOXG1P55316 489 aaPredicted RBP9.65□□□□□ -0.86
TRAPPC4-213ENST00000533149 LSM6P62312 80 aaKnown RBP9.65□□□□□ -0.86
TRAPPC4-213ENST00000533149 CDONQ4KMG0 1287 aa9.65□□□□□ -0.86
TRAPPC4-213ENST00000533149 ZNF684Q5T5D7 378 aa9.65□□□□□ -0.86
TRAPPC4-213ENST00000533149 CORO6Q6QEF8 472 aa9.65□□□□□ -0.86
TRAPPC4-213ENST00000533149 PLEKHG7Q6ZR37 379 aa9.65□□□□□ -0.86
TRAPPC4-213ENST00000533149 KLBQ86Z14 1044 aa9.65□□□□□ -0.86
TRAPPC4-213ENST00000533149 LINC00346Q8IVM7 164 aa9.65□□□□□ -0.86
TRAPPC4-213ENST00000533149 SYS1Q8N2H4 156 aa9.65□□□□□ -0.86
TRAPPC4-213ENST00000533149 ASB17Q8WXJ9 295 aa9.65□□□□□ -0.86
TRAPPC4-213ENST00000533149 NABP1Q96AH0 204 aa9.65□□□□□ -0.86
TRAPPC4-213ENST00000533149 C4orf36Q96KX1 117 aa9.65□□□□□ -0.86
TRAPPC4-213ENST00000533149 OPALINQ96PE5 141 aa9.65□□□□□ -0.86
TRAPPC4-213ENST00000533149 ALKBH3Q96Q83 286 aaPredicted RBP9.65□□□□□ -0.86
TRAPPC4-213ENST00000533149 AMELYQ99218 206 aa9.65□□□□□ -0.86
TRAPPC4-213ENST00000533149 MYCBPQ99417 103 aaPredicted RBP9.65□□□□□ -0.86
TRAPPC4-213ENST00000533149 DOK1Q99704 481 aa9.65□□□□□ -0.86
TRAPPC4-213ENST00000533149 ABHD6Q9BV23 337 aa9.65□□□□□ -0.86
TRAPPC4-213ENST00000533149 SIAEQ9HAT2 523 aa9.65□□□□□ -0.86
TRAPPC4-213ENST00000533149 DYNLRB1Q9NP97 96 aa9.65□□□□□ -0.86
TRAPPC4-213ENST00000533149 TMEM38BQ9NVV0 291 aa9.65□□□□□ -0.86
TRAPPC4-213ENST00000533149 SLCO1C1Q9NYB5 712 aa9.65□□□□□ -0.86
TRAPPC4-213ENST00000533149 NDUFA13Q9P0J0 144 aa9.65□□□□□ -0.86
TRAPPC4-213ENST00000533149 CYB5R1Q9UHQ9 305 aa9.65□□□□□ -0.86
TRAPPC4-213ENST00000533149 PPIAL4AQ9Y536 164 aa9.65□□□□□ -0.86
TRAPPC4-213ENST00000533149 IGHV1-18A0A0C4DH31 117 aa9.64□□□□□ -0.87
TRAPPC4-213ENST00000533149 A0A0G2JMP0 313 aa9.64□□□□□ -0.87
TRAPPC4-213ENST00000533149 A0A0X1KG70 313 aa9.64□□□□□ -0.87
TRAPPC4-213ENST00000533149 SMIM31A0A1B0GVY4 71 aa9.64□□□□□ -0.87
TRAPPC4-213ENST00000533149 E9PI62 339 aa9.64□□□□□ -0.87
TRAPPC4-213ENST00000533149 J3QLI3 93 aa9.64□□□□□ -0.87
TRAPPC4-213ENST00000533149 PSMD9O00233 223 aa9.64□□□□□ -0.87
TRAPPC4-213ENST00000533149 SULT1C4O75897 302 aa9.64□□□□□ -0.87
TRAPPC4-213ENST00000533149 AVPP01185 164 aa9.64□□□□□ -0.87
TRAPPC4-213ENST00000533149 PRTN3P24158 256 aa9.64□□□□□ -0.87
TRAPPC4-213ENST00000533149 GCH1P30793 250 aa9.64□□□□□ -0.87
TRAPPC4-213ENST00000533149 LIPAP38571 399 aa9.64□□□□□ -0.87
TRAPPC4-213ENST00000533149 GBX2P52951 348 aaPredicted RBP9.64□□□□□ -0.87
TRAPPC4-213ENST00000533149 ACTA2P62736 377 aa9.64□□□□□ -0.87
TRAPPC4-213ENST00000533149 ACTG2P63267 376 aa9.64□□□□□ -0.87
TRAPPC4-213ENST00000533149 ARF1P84077 181 aaKnown RBP9.64□□□□□ -0.87
TRAPPC4-213ENST00000533149 ACSM1Q08AH1 577 aa9.64□□□□□ -0.87
TRAPPC4-213ENST00000533149 MLLT11Q13015 90 aaPredicted RBP9.64□□□□□ -0.87
TRAPPC4-213ENST00000533149 TPBGQ13641 420 aa9.64□□□□□ -0.87
TRAPPC4-213ENST00000533149 ENDOGQ14249 297 aaKnown RBP9.64□□□□□ -0.87
TRAPPC4-213ENST00000533149 TSTQ16762 297 aaKnown RBP9.64□□□□□ -0.87
TRAPPC4-213ENST00000533149 FAM27BQ5VT28 67 aa9.64□□□□□ -0.87
TRAPPC4-213ENST00000533149 C9orf135Q5VTT2 229 aa9.64□□□□□ -0.87
TRAPPC4-213ENST00000533149 GPR107Q5VW38 600 aa9.64□□□□□ -0.87
TRAPPC4-213ENST00000533149 SPATC1Q76KD6 591 aa9.64□□□□□ -0.87
TRAPPC4-213ENST00000533149 VASH1Q7L8A9 365 aaPredicted RBP9.64□□□□□ -0.87
TRAPPC4-213ENST00000533149 DCXRQ7Z4W1 244 aa9.64□□□□□ -0.87
TRAPPC4-213ENST00000533149 KCTD20Q7Z5Y7 419 aa9.64□□□□□ -0.87
TRAPPC4-213ENST00000533149 CLVS1Q8IUQ0 354 aaPredicted RBP9.64□□□□□ -0.87
TRAPPC4-213ENST00000533149 EGFL6Q8IUX8 553 aa9.64□□□□□ -0.87
TRAPPC4-213ENST00000533149 ZCCHC24Q8N2G6 241 aaKnown RBP9.64□□□□□ -0.87
TRAPPC4-213ENST00000533149 NUP37Q8NFH4 326 aa9.64□□□□□ -0.87
TRAPPC4-213ENST00000533149 OR4M2Q8NGB6 313 aa9.64□□□□□ -0.87
TRAPPC4-213ENST00000533149 OR2AJ1Q8NGZ0 328 aa9.64□□□□□ -0.87
TRAPPC4-213ENST00000533149 YIPF6Q96EC8 236 aa9.64□□□□□ -0.87
TRAPPC4-213ENST00000533149 OR8B4Q96RC9 309 aa9.64□□□□□ -0.87
TRAPPC4-213ENST00000533149 FOXB1Q99853 325 aa9.64□□□□□ -0.87
TRAPPC4-213ENST00000533149 ZNF416Q9BWM5 594 aa9.64□□□□□ -0.87
TRAPPC4-213ENST00000533149 NELFAQ9H3P2 528 aa9.64□□□□□ -0.87
TRAPPC4-213ENST00000533149 NARFLQ9H6Q4 476 aa9.64□□□□□ -0.87
TRAPPC4-213ENST00000533149 ZNF442Q9H7R0 627 aa9.64□□□□□ -0.87
TRAPPC4-213ENST00000533149 ELOVL3Q9HB03 270 aa9.64□□□□□ -0.87
TRAPPC4-213ENST00000533149 G6PC2Q9NQR9 355 aa9.64□□□□□ -0.87
TRAPPC4-213ENST00000533149 TREM2Q9NZC2 230 aa9.64□□□□□ -0.87
TRAPPC4-213ENST00000533149 MRM2Q9UI43 246 aaKnown RBP9.64□□□□□ -0.87
TRAPPC4-213ENST00000533149 GNG8Q9UK08 70 aa9.64□□□□□ -0.87
TRAPPC4-213ENST00000533149 IKZF2Q9UKS7 526 aa9.64□□□□□ -0.87
TRAPPC4-213ENST00000533149 POLR1DQ9Y2S0 133 aa9.64□□□□□ -0.87
TRAPPC4-213ENST00000533149 LHFPL6Q9Y693 200 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms